RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 GABRA6Q16445 453 aa10.02□□□□□ -0.8
LIN28A-201ENST00000254231 TATDN3Q17R31 274 aa10.02□□□□□ -0.8
LIN28A-201ENST00000254231 DEGS2Q6QHC5 323 aa10.02□□□□□ -0.8
LIN28A-201ENST00000254231 ADGRE4PQ86SQ3 457 aa10.02□□□□□ -0.8
LIN28A-201ENST00000254231 GALNT11Q8NCW6 608 aa10.02□□□□□ -0.8
LIN28A-201ENST00000254231 OR8H1Q8NGG4 311 aa10.02□□□□□ -0.8
LIN28A-201ENST00000254231 ACOT12Q8WYK0 555 aa10.02□□□□□ -0.8
LIN28A-201ENST00000254231 BCL2L2Q92843 193 aaPredicted RBP10.02□□□□□ -0.8
LIN28A-201ENST00000254231 WNT2BQ93097 391 aa10.02□□□□□ -0.8
LIN28A-201ENST00000254231 BCL7BQ9BQE9 202 aa10.02□□□□□ -0.8
LIN28A-201ENST00000254231 CST11Q9H112 138 aa10.02□□□□□ -0.8
LIN28A-201ENST00000254231 CACNG2Q9Y698 323 aa10.02□□□□□ -0.8
LIN28A-201ENST00000254231 VPS13CQ709C8 3753 aa10.02□□□□□ -0.81
LIN28A-201ENST00000254231 TRAPPC2LH3BP13 241 aa10.02□□□□□ -0.81
LIN28A-201ENST00000254231 SC5DO75845 299 aa10.02□□□□□ -0.81
LIN28A-201ENST00000254231 PLAUP00749 431 aa10.02□□□□□ -0.81
LIN28A-201ENST00000254231 MMP7P09237 267 aaPredicted RBP10.02□□□□□ -0.81
LIN28A-201ENST00000254231 BCL3P20749 454 aa10.02□□□□□ -0.81
LIN28A-201ENST00000254231 ATP1B3P54709 279 aa10.02□□□□□ -0.81
LIN28A-201ENST00000254231 UNC119Q13432 240 aa10.02□□□□□ -0.81
LIN28A-201ENST00000254231 ZNF181Q2M3W8 571 aa10.02□□□□□ -0.81
LIN28A-201ENST00000254231 DYNLRB1Q9NP97 96 aa10.02□□□□□ -0.81
LIN28A-201ENST00000254231 DCAF16Q9NXF7 216 aa10.02□□□□□ -0.81
LIN28A-201ENST00000254231 CLCF1Q9UBD9 225 aa10.02□□□□□ -0.81
LIN28A-201ENST00000254231 FOXJ3Q9UPW0 622 aa10.02□□□□□ -0.81
LIN28A-201ENST00000254231 IGKV1-27A0A075B6S5 117 aa10.02□□□□□ -0.81
LIN28A-201ENST00000254231 MEGF11A6BM72 1044 aa10.02□□□□□ -0.81
LIN28A-201ENST00000254231 TNFSF12O43508 249 aa10.02□□□□□ -0.81
LIN28A-201ENST00000254231 ARPC4P59998 168 aa10.02□□□□□ -0.81
LIN28A-201ENST00000254231 ERVFRD-1P60508 538 aa10.02□□□□□ -0.81
LIN28A-201ENST00000254231 OR2A2Q6IF42 318 aa10.02□□□□□ -0.81
LIN28A-201ENST00000254231 KLF14Q8TD94 323 aaPredicted RBP10.02□□□□□ -0.81
LIN28A-201ENST00000254231 EMG1Q92979 244 aaKnown RBP10.02□□□□□ -0.81
LIN28A-201ENST00000254231 URM1Q9BTM9 101 aaKnown RBP10.02□□□□□ -0.81
LIN28A-201ENST00000254231 ADAT1Q9BUB4 502 aaKnown RBP10.02□□□□□ -0.81
LIN28A-201ENST00000254231 PPA2Q9H2U2 334 aa10.02□□□□□ -0.81
LIN28A-201ENST00000254231 IGHV3-43A0A0B4J1X8 118 aa10.01□□□□□ -0.81
LIN28A-201ENST00000254231 C13orf42A0A1B0GVH6 325 aa10.01□□□□□ -0.81
LIN28A-201ENST00000254231 DNPH1O43598 174 aa10.01□□□□□ -0.81
LIN28A-201ENST00000254231 RAF1P04049 648 aa10.01□□□□□ -0.81
LIN28A-201ENST00000254231 ERCC1P07992 297 aaPredicted RBP10.01□□□□□ -0.81
LIN28A-201ENST00000254231 IGHV3-43DP0DP04 118 aa10.01□□□□□ -0.81
LIN28A-201ENST00000254231 NFYAP23511 347 aaPredicted RBP10.01□□□□□ -0.81
LIN28A-201ENST00000254231 HRH1P35367 487 aa10.01□□□□□ -0.81
LIN28A-201ENST00000254231 PSG7Q13046 419 aa10.01□□□□□ -0.81
LIN28A-201ENST00000254231 RIPPLY2Q5TAB7 128 aa10.01□□□□□ -0.81
LIN28A-201ENST00000254231 ZDHHC23Q8IYP9 409 aa10.01□□□□□ -0.81
LIN28A-201ENST00000254231 RNF150Q9ULK6 438 aa10.01□□□□□ -0.81
LIN28A-201ENST00000254231 CCSO14618 274 aa10.01□□□□□ -0.81
LIN28A-201ENST00000254231 GABRA1P14867 456 aa10.01□□□□□ -0.81
LIN28A-201ENST00000254231 CFL1P23528 166 aaKnown RBP10.01□□□□□ -0.81
LIN28A-201ENST00000254231 PAX6P26367 422 aa10.01□□□□□ -0.81
LIN28A-201ENST00000254231 LINC00303Q3SY05 128 aa10.01□□□□□ -0.81
LIN28A-201ENST00000254231 AGAP6Q5VW22 663 aa10.01□□□□□ -0.81
LIN28A-201ENST00000254231 RHOUQ7L0Q8 258 aa10.01□□□□□ -0.81
LIN28A-201ENST00000254231 MKXQ8IYA7 352 aa10.01□□□□□ -0.81
LIN28A-201ENST00000254231 FTMTQ8N4E7 242 aa10.01□□□□□ -0.81
LIN28A-201ENST00000254231 GDPD1Q8N9F7 314 aa10.01□□□□□ -0.81
LIN28A-201ENST00000254231 MINDY2Q8NBR6 621 aa10.01□□□□□ -0.81
LIN28A-201ENST00000254231 PIK3IP1Q96FE7 263 aa10.01□□□□□ -0.81
LIN28A-201ENST00000254231 SEC22AQ96IW7 307 aa10.01□□□□□ -0.81
LIN28A-201ENST00000254231 PCDHGA9Q9Y5G4 932 aaKnown RBP10.01□□□□□ -0.81
LIN28A-201ENST00000254231 ZNF816-ZNF321PA0A0X1KG74 233 aa10.01□□□□□ -0.81
LIN28A-201ENST00000254231 ZNF736B4DX44 427 aaPredicted RBP10.01□□□□□ -0.81
LIN28A-201ENST00000254231 UBL3O95164 117 aa10.01□□□□□ -0.81
LIN28A-201ENST00000254231 PITPNAQ00169 270 aa10.01□□□□□ -0.81
LIN28A-201ENST00000254231 CLVS2Q5SYC1 327 aa10.01□□□□□ -0.81
LIN28A-201ENST00000254231 FAM53AQ6NSI3 398 aaPredicted RBP10.01□□□□□ -0.81
LIN28A-201ENST00000254231 BEND4Q6ZU67 534 aa10.01□□□□□ -0.81
LIN28A-201ENST00000254231 MRGPRGQ86SM5 289 aa10.01□□□□□ -0.81
LIN28A-201ENST00000254231 FAM57AQ8TBR7 257 aa10.01□□□□□ -0.81
LIN28A-201ENST00000254231 YIPF5Q969M3 257 aa10.01□□□□□ -0.81
LIN28A-201ENST00000254231 ITPKCQ96DU7 683 aa10.01□□□□□ -0.81
LIN28A-201ENST00000254231 POM121L2Q96KW2 1035 aa10.01□□□□□ -0.81
LIN28A-201ENST00000254231 METTL9Q9H1A3 318 aa10.01□□□□□ -0.81
LIN28A-201ENST00000254231 ZNF724A8MTY0 619 aa10□□□□□ -0.81
LIN28A-201ENST00000254231 C16orf97H3BN30 126 aa10□□□□□ -0.81
LIN28A-201ENST00000254231 HTR2BP41595 481 aa10□□□□□ -0.81
LIN28A-201ENST00000254231 RNASE10Q5GAN6 216 aaKnown RBP10□□□□□ -0.81
LIN28A-201ENST00000254231 NSUN5P2Q63ZY6 315 aa10□□□□□ -0.81
LIN28A-201ENST00000254231 UNQ9370/PRO34162Q6UXP9 181 aa10□□□□□ -0.81
LIN28A-201ENST00000254231 IDO2Q6ZQW0 420 aa10□□□□□ -0.81
LIN28A-201ENST00000254231 AKAP1Q92667 903 aaKnown RBP eCLIP10□□□□□ -0.81
LIN28A-201ENST00000254231 NRGNQ92686 78 aa10□□□□□ -0.81
LIN28A-201ENST00000254231 SLC17A5Q9NRA2 495 aa10□□□□□ -0.81
LIN28A-201ENST00000254231 TRBV5-7A0A0A0MS05 114 aa10□□□□□ -0.81
LIN28A-201ENST00000254231 A0A1W2PPE3 182 aa10□□□□□ -0.81
LIN28A-201ENST00000254231 CNOT4O95628 575 aaKnown RBP10□□□□□ -0.81
LIN28A-201ENST00000254231 BCL2A1Q16548 175 aa10□□□□□ -0.81
LIN28A-201ENST00000254231 OR5L1Q8NGL2 311 aa10□□□□□ -0.81
LIN28A-201ENST00000254231 HAVCR1Q96D42 359 aa10□□□□□ -0.81
LIN28A-201ENST00000254231 CMSS1Q9BQ75 279 aaKnown RBP10□□□□□ -0.81
LIN28A-201ENST00000254231 PRDM14Q9GZV8 571 aa10□□□□□ -0.81
LIN28A-201ENST00000254231 EHFQ9NZC4 300 aa10□□□□□ -0.81
LIN28A-201ENST00000254231 SETXQ7Z333 2677 aaKnown RBP10□□□□□ -0.81
LIN28A-201ENST00000254231 ITPR3Q14573 2671 aa10□□□□□ -0.81
LIN28A-201ENST00000254231 OR5H1A6NKK0 313 aa9.99□□□□□ -0.81
LIN28A-201ENST00000254231 IGHG3P01860 377 aa9.99□□□□□ -0.81
LIN28A-201ENST00000254231 CALCRP30988 508 aa9.99□□□□□ -0.81
LIN28A-201ENST00000254231 RBM39Q14498 530 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms