RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 CA5BP1Q8WTZ4 195 aa13.71□□□□□ -0.21
LRFN1-201ENST00000248668 PIGCQ92535 297 aa13.71□□□□□ -0.21
LRFN1-201ENST00000248668 C5orf66Q9H5L9 145 aa13.71□□□□□ -0.21
LRFN1-201ENST00000248668 DSPP15924 2871 aaKnown RBP13.71□□□□□ -0.21
LRFN1-201ENST00000248668 ZNF587BE7ETH6 402 aa13.71□□□□□ -0.21
LRFN1-201ENST00000248668 TXNL1O43396 289 aa13.71□□□□□ -0.21
LRFN1-201ENST00000248668 MRPL33O75394 65 aaKnown RBP13.71□□□□□ -0.21
LRFN1-201ENST00000248668 ADAP1O75689 374 aa13.71□□□□□ -0.21
LRFN1-201ENST00000248668 TNFSF15O95150 251 aa13.71□□□□□ -0.21
LRFN1-201ENST00000248668 CSTBP04080 98 aaKnown RBP13.71□□□□□ -0.21
LRFN1-201ENST00000248668 GLRA1P23415 457 aa13.71□□□□□ -0.21
LRFN1-201ENST00000248668 RSU1Q15404 277 aa13.71□□□□□ -0.21
LRFN1-201ENST00000248668 TGIF1Q15583 401 aa13.71□□□□□ -0.21
LRFN1-201ENST00000248668 ABLIM2Q6H8Q1 611 aa13.71□□□□□ -0.21
LRFN1-201ENST00000248668 DRAM2Q6UX65 266 aa13.71□□□□□ -0.21
LRFN1-201ENST00000248668 HOGA1Q86XE5 327 aa13.71□□□□□ -0.21
LRFN1-201ENST00000248668 CBLN2Q8IUK8 224 aa13.71□□□□□ -0.21
LRFN1-201ENST00000248668 OR13G1Q8NGZ3 307 aa13.71□□□□□ -0.21
LRFN1-201ENST00000248668 CPT1CQ8TCG5 803 aa13.71□□□□□ -0.21
LRFN1-201ENST00000248668 NKX6-2Q9C056 277 aaPredicted RBP13.71□□□□□ -0.21
LRFN1-201ENST00000248668 OR2H1Q9GZK4 316 aa13.71□□□□□ -0.21
LRFN1-201ENST00000248668 WDR13Q9H1Z4 485 aa13.71□□□□□ -0.21
LRFN1-201ENST00000248668 SLC7A10Q9NS82 523 aa13.71□□□□□ -0.21
LRFN1-201ENST00000248668 MPTX1A8MV57 137 aa13.71□□□□□ -0.22
LRFN1-201ENST00000248668 CST2P09228 141 aa13.71□□□□□ -0.22
LRFN1-201ENST00000248668 UBBP0CG47 229 aa13.71□□□□□ -0.22
LRFN1-201ENST00000248668 HOXB1P14653 301 aaPredicted RBP13.71□□□□□ -0.22
LRFN1-201ENST00000248668 RIPPLY1Q0D2K3 151 aa13.71□□□□□ -0.22
LRFN1-201ENST00000248668 HFEQ30201 348 aa13.71□□□□□ -0.22
LRFN1-201ENST00000248668 PABPC1L2AQ5JQF8 200 aa13.71□□□□□ -0.22
LRFN1-201ENST00000248668 ALKBH2Q6NS38 261 aa13.71□□□□□ -0.22
LRFN1-201ENST00000248668 HAGHLQ6PII5 290 aaPredicted RBP13.71□□□□□ -0.22
LRFN1-201ENST00000248668 IL22RA1Q8N6P7 574 aa13.71□□□□□ -0.22
LRFN1-201ENST00000248668 ZDHHC22Q8N966 263 aa13.71□□□□□ -0.22
LRFN1-201ENST00000248668 FAAP24Q9BTP7 215 aa13.71□□□□□ -0.22
LRFN1-201ENST00000248668 PRRG4Q9BZD6 226 aa13.71□□□□□ -0.22
LRFN1-201ENST00000248668 SPRY4Q9C004 299 aa13.71□□□□□ -0.22
LRFN1-201ENST00000248668 GPR31O00270 319 aa13.7□□□□□ -0.22
LRFN1-201ENST00000248668 HLA-HP01893 362 aa13.7□□□□□ -0.22
LRFN1-201ENST00000248668 SERPINF1P36955 418 aa13.7□□□□□ -0.22
LRFN1-201ENST00000248668 GSK3AP49840 483 aa13.7□□□□□ -0.22
LRFN1-201ENST00000248668 C9orf152Q5JTZ5 239 aa13.7□□□□□ -0.22
LRFN1-201ENST00000248668 HES3Q5TGS1 186 aa13.7□□□□□ -0.22
LRFN1-201ENST00000248668 MITD1Q8WV92 249 aa13.7□□□□□ -0.22
LRFN1-201ENST00000248668 CPNE4Q96A23 557 aaPredicted RBP13.7□□□□□ -0.22
LRFN1-201ENST00000248668 ZPBPQ9BS86 351 aa13.7□□□□□ -0.22
LRFN1-201ENST00000248668 SELLP14151 372 aa13.7□□□□□ -0.22
LRFN1-201ENST00000248668 PIGYQ3MUY2 71 aa13.7□□□□□ -0.22
LRFN1-201ENST00000248668 CHRFAM7AQ494W8 412 aa13.7□□□□□ -0.22
LRFN1-201ENST00000248668 RBMS3Q6XE24 437 aaKnown RBP13.7□□□□□ -0.22
LRFN1-201ENST00000248668 PDZD9Q8IXQ8 264 aa13.7□□□□□ -0.22
LRFN1-201ENST00000248668 BORCS8Q96FH0 119 aa13.7□□□□□ -0.22
LRFN1-201ENST00000248668 ZNF75AQ96N20 296 aa13.7□□□□□ -0.22
LRFN1-201ENST00000248668 DDA1Q9BW61 102 aa13.7□□□□□ -0.22
LRFN1-201ENST00000248668 ZNF703Q9H7S9 590 aaPredicted RBP13.7□□□□□ -0.22
LRFN1-201ENST00000248668 TIMM10BQ9Y5J6 103 aa13.7□□□□□ -0.22
LRFN1-201ENST00000248668 COL27A1Q8IZC6 1860 aaPredicted RBP13.7□□□□□ -0.22
LRFN1-201ENST00000248668 SHANK1Q9Y566 2161 aa13.69□□□□□ -0.22
LRFN1-201ENST00000248668 CPT2P23786 658 aa13.69□□□□□ -0.22
LRFN1-201ENST00000248668 ZNF660Q6AZW8 331 aaPredicted RBP13.69□□□□□ -0.22
LRFN1-201ENST00000248668 VASH2Q86V25 355 aa13.69□□□□□ -0.22
LRFN1-201ENST00000248668 CPEB3Q8NE35 698 aaKnown RBP13.69□□□□□ -0.22
LRFN1-201ENST00000248668 TMEM230Q96A57 120 aa13.69□□□□□ -0.22
LRFN1-201ENST00000248668 TTTY12Q9BZ98 90 aa13.69□□□□□ -0.22
LRFN1-201ENST00000248668 OR51B6Q9H340 312 aa13.69□□□□□ -0.22
LRFN1-201ENST00000248668 ZNF883P0CG24 379 aa13.69□□□□□ -0.22
LRFN1-201ENST00000248668 PVALBP20472 110 aaPredicted RBP13.69□□□□□ -0.22
LRFN1-201ENST00000248668 ARF1P84077 181 aaKnown RBP13.69□□□□□ -0.22
LRFN1-201ENST00000248668 MOB3CQ70IA8 216 aa13.69□□□□□ -0.22
LRFN1-201ENST00000248668 VRK1Q99986 396 aaPredicted RBP13.69□□□□□ -0.22
LRFN1-201ENST00000248668 FAM173AQ9BQD7 235 aa13.69□□□□□ -0.22
LRFN1-201ENST00000248668 MBD2Q9UBB5 411 aa13.69□□□□□ -0.22
LRFN1-201ENST00000248668 PURGQ9UJV8 347 aaKnown RBP13.69□□□□□ -0.22
LRFN1-201ENST00000248668 TINAGQ9UJW2 476 aa13.69□□□□□ -0.22
LRFN1-201ENST00000248668 DHRS7CA6NNS2 312 aa13.69□□□□□ -0.22
LRFN1-201ENST00000248668 DNPH1O43598 174 aa13.69□□□□□ -0.22
LRFN1-201ENST00000248668 NRASP01111 189 aa13.69□□□□□ -0.22
LRFN1-201ENST00000248668 PGAM2P15259 253 aa13.69□□□□□ -0.22
LRFN1-201ENST00000248668 RAB13P51153 203 aa13.69□□□□□ -0.22
LRFN1-201ENST00000248668 LUMP51884 338 aaPredicted RBP13.69□□□□□ -0.22
LRFN1-201ENST00000248668 C11orf87Q6NUJ2 197 aa13.69□□□□□ -0.22
LRFN1-201ENST00000248668 FAM89BQ8N5H3 189 aa13.69□□□□□ -0.22
LRFN1-201ENST00000248668 BHLHE23Q8NDY6 225 aa13.69□□□□□ -0.22
LRFN1-201ENST00000248668 SCARB1Q8WTV0 552 aa13.69□□□□□ -0.22
LRFN1-201ENST00000248668 ACKR4Q9NPB9 350 aa13.69□□□□□ -0.22
LRFN1-201ENST00000248668 OR6C6A6NF89 314 aa13.68□□□□□ -0.22
LRFN1-201ENST00000248668 ABCD4O14678 606 aa13.68□□□□□ -0.22
LRFN1-201ENST00000248668 CYTIPO60759 359 aa13.68□□□□□ -0.22
LRFN1-201ENST00000248668 PLCXD3Q63HM9 321 aa13.68□□□□□ -0.22
LRFN1-201ENST00000248668 OCSTAMPQ9BR26 566 aa13.68□□□□□ -0.22
LRFN1-201ENST00000248668 ZNF471Q9BX82 626 aaPredicted RBP13.68□□□□□ -0.22
LRFN1-201ENST00000248668 MYOZ1Q9NP98 299 aaPredicted RBP13.68□□□□□ -0.22
LRFN1-201ENST00000248668 GSN-AS1Q9NRJ2 163 aa13.68□□□□□ -0.22
LRFN1-201ENST00000248668 SPENQ96T58 3664 aaKnown RBP13.68□□□□□ -0.22
LRFN1-201ENST00000248668 LHX2P50458 406 aa13.68□□□□□ -0.22
LRFN1-201ENST00000248668 CLEC18BQ6UXF7 455 aa13.68□□□□□ -0.22
LRFN1-201ENST00000248668 FOXRED2Q8IWF2 684 aa13.68□□□□□ -0.22
LRFN1-201ENST00000248668 TMEM251Q8N6I4 163 aa13.68□□□□□ -0.22
LRFN1-201ENST00000248668 GEMIN2O14893 280 aaKnown RBP13.68□□□□□ -0.22
LRFN1-201ENST00000248668 FARS2O95363 451 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms