RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 C1orf100Q5SVJ3 147 aa12.47□□□□□ -0.41
PCDHB3-201ENST00000231130 FDX2Q6P4F2 183 aa12.47□□□□□ -0.41
PCDHB3-201ENST00000231130 OPN5Q6U736 354 aa12.47□□□□□ -0.41
PCDHB3-201ENST00000231130 BTNL3Q6UXE8 466 aa12.47□□□□□ -0.41
PCDHB3-201ENST00000231130 NKAIN3Q8N8D7 197 aa12.47□□□□□ -0.41
PCDHB3-201ENST00000231130 OR13G1Q8NGZ3 307 aa12.47□□□□□ -0.41
PCDHB3-201ENST00000231130 PTPMT1Q8WUK0 201 aaPredicted RBP12.47□□□□□ -0.41
PCDHB3-201ENST00000231130 CDCA3Q99618 268 aaPredicted RBP12.47□□□□□ -0.41
PCDHB3-201ENST00000231130 NUDT21O43809 227 aaKnown RBP12.47□□□□□ -0.41
PCDHB3-201ENST00000231130 OR4A8P0C604 315 aa12.47□□□□□ -0.41
PCDHB3-201ENST00000231130 MNX1P50219 401 aaPredicted RBP12.47□□□□□ -0.41
PCDHB3-201ENST00000231130 IDH3GP51553 393 aaPredicted RBP12.47□□□□□ -0.41
PCDHB3-201ENST00000231130 TMEM50BP56557 158 aa12.47□□□□□ -0.41
PCDHB3-201ENST00000231130 SLC37A1P57057 533 aa12.47□□□□□ -0.41
PCDHB3-201ENST00000231130 FXYD4P59646 89 aa12.47□□□□□ -0.41
PCDHB3-201ENST00000231130 BPIFB3P59826 476 aa12.47□□□□□ -0.41
PCDHB3-201ENST00000231130 TSPO2Q5TGU0 170 aa12.47□□□□□ -0.41
PCDHB3-201ENST00000231130 C1orf87Q8N0U7 546 aa12.47□□□□□ -0.41
PCDHB3-201ENST00000231130 COMMD1Q8N668 190 aa12.47□□□□□ -0.41
PCDHB3-201ENST00000231130 LPAR5Q9H1C0 372 aa12.47□□□□□ -0.41
PCDHB3-201ENST00000231130 SLC26A1Q9H2B4 701 aa12.47□□□□□ -0.41
PCDHB3-201ENST00000231130 SHANK1Q9Y566 2161 aa12.47□□□□□ -0.41
PCDHB3-201ENST00000231130 IL33O95760 270 aa12.47□□□□□ -0.41
PCDHB3-201ENST00000231130 TNFP01375 233 aa12.47□□□□□ -0.41
PCDHB3-201ENST00000231130 ANOS1P23352 680 aa12.47□□□□□ -0.41
PCDHB3-201ENST00000231130 OMGP23515 440 aa12.47□□□□□ -0.41
PCDHB3-201ENST00000231130 BLVRBP30043 206 aaPredicted RBP12.47□□□□□ -0.41
PCDHB3-201ENST00000231130 GABRA4P48169 554 aa12.47□□□□□ -0.41
PCDHB3-201ENST00000231130 GFERP55789 205 aa12.47□□□□□ -0.41
PCDHB3-201ENST00000231130 PAX5Q02548 391 aa12.47□□□□□ -0.41
PCDHB3-201ENST00000231130 FNDC9Q8TBE3 224 aa12.47□□□□□ -0.41
PCDHB3-201ENST00000231130 RTBDNQ9BSG5 229 aaPredicted RBP12.47□□□□□ -0.41
PCDHB3-201ENST00000231130 ADAM19Q9H013 955 aa12.47□□□□□ -0.41
PCDHB3-201ENST00000231130 RAB18Q9NP72 206 aa12.47□□□□□ -0.41
PCDHB3-201ENST00000231130 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.47□□□□□ -0.41
PCDHB3-201ENST00000231130 TRANK1O15050 2925 aa12.46□□□□□ -0.41
PCDHB3-201ENST00000231130 CHD3Q12873 2000 aaKnown RBP12.46□□□□□ -0.41
PCDHB3-201ENST00000231130 IFNA21P01568 189 aa12.46□□□□□ -0.41
PCDHB3-201ENST00000231130 RPLP1P05386 114 aaKnown RBP12.46□□□□□ -0.41
PCDHB3-201ENST00000231130 MMP9P14780 707 aa12.46□□□□□ -0.41
PCDHB3-201ENST00000231130 KIR2DL1P43626 348 aaPredicted RBP12.46□□□□□ -0.41
PCDHB3-201ENST00000231130 CCL20P78556 96 aa12.46□□□□□ -0.41
PCDHB3-201ENST00000231130 TLE3Q04726 772 aa12.46□□□□□ -0.41
PCDHB3-201ENST00000231130 PMS2P11Q13670 270 aa12.46□□□□□ -0.41
PCDHB3-201ENST00000231130 NSDHLQ15738 373 aa12.46□□□□□ -0.41
PCDHB3-201ENST00000231130 PHF19Q5T6S3 580 aa12.46□□□□□ -0.41
PCDHB3-201ENST00000231130 NUP54Q7Z3B4 507 aa12.46□□□□□ -0.41
PCDHB3-201ENST00000231130 CYB561D1Q8N8Q1 229 aa12.46□□□□□ -0.41
PCDHB3-201ENST00000231130 C11orf40Q8WZ69 217 aa12.46□□□□□ -0.41
PCDHB3-201ENST00000231130 PRRX2Q99811 253 aa12.46□□□□□ -0.41
PCDHB3-201ENST00000231130 WNT5BQ9H1J7 359 aa12.46□□□□□ -0.41
PCDHB3-201ENST00000231130 DUSP15Q9H1R2 295 aaPredicted RBP12.46□□□□□ -0.41
PCDHB3-201ENST00000231130 TMED3Q9Y3Q3 217 aa12.46□□□□□ -0.41
PCDHB3-201ENST00000231130 B3GALT1Q9Y5Z6 326 aa12.46□□□□□ -0.41
PCDHB3-201ENST00000231130 PLPP3O14495 311 aa12.46□□□□□ -0.41
PCDHB3-201ENST00000231130 GABRR1P24046 479 aa12.46□□□□□ -0.41
PCDHB3-201ENST00000231130 FCARP24071 287 aa12.46□□□□□ -0.41
PCDHB3-201ENST00000231130 BIDP55957 195 aa12.46□□□□□ -0.41
PCDHB3-201ENST00000231130 HERPUD1Q15011 391 aa12.46□□□□□ -0.41
PCDHB3-201ENST00000231130 OR5R1Q8NH85 324 aa12.46□□□□□ -0.41
PCDHB3-201ENST00000231130 ZNF519Q8TB69 540 aa12.46□□□□□ -0.41
PCDHB3-201ENST00000231130 TMEM37Q8WXS4 190 aa12.46□□□□□ -0.41
PCDHB3-201ENST00000231130 HOXB13Q92826 284 aaPredicted RBP12.46□□□□□ -0.41
PCDHB3-201ENST00000231130 BADQ92934 168 aa12.46□□□□□ -0.41
PCDHB3-201ENST00000231130 HDHD3Q9BSH5 251 aaPredicted RBP12.46□□□□□ -0.41
PCDHB3-201ENST00000231130 CABLES2Q9BTV7 478 aa12.46□□□□□ -0.41
PCDHB3-201ENST00000231130 C14orf166Q9Y224 244 aaKnown RBP12.46□□□□□ -0.41
PCDHB3-201ENST00000231130 CELSR3Q9NYQ7 3312 aa12.46□□□□□ -0.42
PCDHB3-201ENST00000231130 TMEM150CB9EJG8 249 aa12.46□□□□□ -0.42
PCDHB3-201ENST00000231130 SIAH2O43255 324 aa12.46□□□□□ -0.42
PCDHB3-201ENST00000231130 AMBPP02760 352 aa12.46□□□□□ -0.42
PCDHB3-201ENST00000231130 HIST1H1DP16402 221 aaKnown RBP12.46□□□□□ -0.42
PCDHB3-201ENST00000231130 FSTP19883 344 aa12.46□□□□□ -0.42
PCDHB3-201ENST00000231130 OR3A1P47881 315 aa12.46□□□□□ -0.42
PCDHB3-201ENST00000231130 FNDC7Q5VTL7 733 aa12.46□□□□□ -0.42
PCDHB3-201ENST00000231130 BRICD5Q6PL45 260 aa12.46□□□□□ -0.42
PCDHB3-201ENST00000231130 TMEM123Q8N131 208 aa12.46□□□□□ -0.42
PCDHB3-201ENST00000231130 PRR18Q8N4B5 295 aa12.46□□□□□ -0.42
PCDHB3-201ENST00000231130 LIPHQ8WWY8 451 aa12.46□□□□□ -0.42
PCDHB3-201ENST00000231130 MRPL24Q96A35 216 aaKnown RBP12.46□□□□□ -0.42
PCDHB3-201ENST00000231130 SCARF2Q96GP6 870 aaPredicted RBP12.46□□□□□ -0.42
PCDHB3-201ENST00000231130 LIN37Q96GY3 246 aaPredicted RBP12.46□□□□□ -0.42
PCDHB3-201ENST00000231130 GPR84Q9NQS5 396 aa12.46□□□□□ -0.42
PCDHB3-201ENST00000231130 XKRY2A2RUG3 117 aa12.45□□□□□ -0.42
PCDHB3-201ENST00000231130 FAM221AA4D161 298 aa12.45□□□□□ -0.42
PCDHB3-201ENST00000231130 DHRS7CA6NNS2 312 aa12.45□□□□□ -0.42
PCDHB3-201ENST00000231130 CST2P09228 141 aa12.45□□□□□ -0.42
PCDHB3-201ENST00000231130 OR5H8P0DN80 308 aa12.45□□□□□ -0.42
PCDHB3-201ENST00000231130 ZNF708P17019 499 aa12.45□□□□□ -0.42
PCDHB3-201ENST00000231130 S100A7P31151 101 aa12.45□□□□□ -0.42
PCDHB3-201ENST00000231130 TMEM268Q5VZI3 342 aa12.45□□□□□ -0.42
PCDHB3-201ENST00000231130 FAHD2BQ6P2I3 314 aaPredicted RBP12.45□□□□□ -0.42
PCDHB3-201ENST00000231130 FAM57BQ71RH2 274 aa12.45□□□□□ -0.42
PCDHB3-201ENST00000231130 FAHD2AQ96GK7 314 aa12.45□□□□□ -0.42
PCDHB3-201ENST00000231130 PITPNC1Q9UKF7 332 aa12.45□□□□□ -0.42
PCDHB3-201ENST00000231130 NUP210LQ5VU65 1888 aa12.45□□□□□ -0.42
PCDHB3-201ENST00000231130 A0A1W2PQF6 199 aa12.45□□□□□ -0.42
PCDHB3-201ENST00000231130 RBFOX3A6NFN3 312 aa12.45□□□□□ -0.42
PCDHB3-201ENST00000231130 A6NIZ1 184 aa12.45□□□□□ -0.42
PCDHB3-201ENST00000231130 OPRM1P35372 400 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms