RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 FAM220AQ7Z4H9 259 aa11.36□□□□□ -0.59
VEGFA-201ENST00000230480 C1QL2Q7Z5L3 287 aa11.36□□□□□ -0.59
VEGFA-201ENST00000230480 C8orf59Q8N0T1 100 aaPredicted RBP11.36□□□□□ -0.59
VEGFA-201ENST00000230480 BATF2Q8N1L9 274 aa11.36□□□□□ -0.59
VEGFA-201ENST00000230480 FTMTQ8N4E7 242 aa11.36□□□□□ -0.59
VEGFA-201ENST00000230480 POC1AQ8NBT0 407 aa11.36□□□□□ -0.59
VEGFA-201ENST00000230480 LY6G5BQ8NDX9 201 aa11.36□□□□□ -0.59
VEGFA-201ENST00000230480 SETD9Q8NE22 299 aa11.36□□□□□ -0.59
VEGFA-201ENST00000230480 TRMT10AQ8TBZ6 339 aaKnown RBP11.36□□□□□ -0.59
VEGFA-201ENST00000230480 NPRL2Q8WTW4 380 aa11.36□□□□□ -0.59
VEGFA-201ENST00000230480 C17orf50Q8WW18 174 aa11.36□□□□□ -0.59
VEGFA-201ENST00000230480 RAB40AQ8WXH6 277 aa11.36□□□□□ -0.59
VEGFA-201ENST00000230480 TMEM80Q96HE8 168 aa11.36□□□□□ -0.59
VEGFA-201ENST00000230480 C7orf69Q9H7B7 122 aa11.36□□□□□ -0.59
VEGFA-201ENST00000230480 CAB39Q9Y376 341 aaPredicted RBP11.36□□□□□ -0.59
VEGFA-201ENST00000230480 TENM1Q9UKZ4 2725 aa11.36□□□□□ -0.59
VEGFA-201ENST00000230480 KIAA2026Q5HYC2 2103 aa11.35□□□□□ -0.59
VEGFA-201ENST00000230480 A0A0G2JMP0 313 aa11.35□□□□□ -0.59
VEGFA-201ENST00000230480 A0A0X1KG70 313 aa11.35□□□□□ -0.59
VEGFA-201ENST00000230480 J3QLI3 93 aa11.35□□□□□ -0.59
VEGFA-201ENST00000230480 J3QT63 122 aa11.35□□□□□ -0.59
VEGFA-201ENST00000230480 IFNA2P01563 188 aa11.35□□□□□ -0.59
VEGFA-201ENST00000230480 JUNBP17275 347 aaPredicted RBP11.35□□□□□ -0.59
VEGFA-201ENST00000230480 SRD5A1P18405 259 aa11.35□□□□□ -0.59
VEGFA-201ENST00000230480 ATF1P18846 271 aa11.35□□□□□ -0.59
VEGFA-201ENST00000230480 HAAOP46952 286 aa11.35□□□□□ -0.59
VEGFA-201ENST00000230480 TMBIM6P55061 237 aa11.35□□□□□ -0.59
VEGFA-201ENST00000230480 ACTA2P62736 377 aa11.35□□□□□ -0.59
VEGFA-201ENST00000230480 GNB2P62879 340 aa11.35□□□□□ -0.59
VEGFA-201ENST00000230480 ACTG2P63267 376 aa11.35□□□□□ -0.59
VEGFA-201ENST00000230480 IRF3Q14653 427 aa11.35□□□□□ -0.59
VEGFA-201ENST00000230480 CDK5R1Q15078 307 aa11.35□□□□□ -0.59
VEGFA-201ENST00000230480 ESCO2Q56NI9 601 aa11.35□□□□□ -0.59
VEGFA-201ENST00000230480 DMKNQ6E0U4 476 aaPredicted RBP11.35□□□□□ -0.59
VEGFA-201ENST00000230480 ACP7Q6ZNF0 438 aa11.35□□□□□ -0.59
VEGFA-201ENST00000230480 UTS2BQ765I0 119 aa11.35□□□□□ -0.59
VEGFA-201ENST00000230480 BCL6BQ8N143 479 aaPredicted RBP11.35□□□□□ -0.59
VEGFA-201ENST00000230480 CENPSQ8N2Z9 138 aa11.35□□□□□ -0.59
VEGFA-201ENST00000230480 OR4M2Q8NGB6 313 aa11.35□□□□□ -0.59
VEGFA-201ENST00000230480 OR8B3Q8NGG8 313 aa11.35□□□□□ -0.59
VEGFA-201ENST00000230480 OR13C5Q8NGS8 318 aa11.35□□□□□ -0.59
VEGFA-201ENST00000230480 GATAD2BQ8WXI9 593 aa11.35□□□□□ -0.59
VEGFA-201ENST00000230480 TMIGD2Q96BF3 282 aa11.35□□□□□ -0.59
VEGFA-201ENST00000230480 C10orf35Q96D05 121 aa11.35□□□□□ -0.59
VEGFA-201ENST00000230480 ORAI1Q96D31 301 aa11.35□□□□□ -0.59
VEGFA-201ENST00000230480 PGLYRP3Q96LB9 341 aa11.35□□□□□ -0.59
VEGFA-201ENST00000230480 HIST1H2AAQ96QV6 131 aa11.35□□□□□ -0.59
VEGFA-201ENST00000230480 OR8B2Q96RD0 313 aa11.35□□□□□ -0.59
VEGFA-201ENST00000230480 BABAM2Q9NXR7 383 aa11.35□□□□□ -0.59
VEGFA-201ENST00000230480 HHLA2Q9UM44 414 aa11.35□□□□□ -0.59
VEGFA-201ENST00000230480 LSM2Q9Y333 95 aaKnown RBP11.35□□□□□ -0.59
VEGFA-201ENST00000230480 NDUFA2O43678 99 aa11.34□□□□□ -0.59
VEGFA-201ENST00000230480 IGHV4-38-2P0DP08 117 aa11.34□□□□□ -0.59
VEGFA-201ENST00000230480 S100A1P23297 94 aa11.34□□□□□ -0.59
VEGFA-201ENST00000230480 GATA3P23771 443 aa11.34□□□□□ -0.59
VEGFA-201ENST00000230480 CEBPDP49716 269 aaPredicted RBP11.34□□□□□ -0.59
VEGFA-201ENST00000230480 RGS21Q2M5E4 152 aa11.34□□□□□ -0.59
VEGFA-201ENST00000230480 PARP16Q8N5Y8 322 aa11.34□□□□□ -0.59
VEGFA-201ENST00000230480 ZFP41Q8N8Y5 198 aa11.34□□□□□ -0.59
VEGFA-201ENST00000230480 CCDC54Q8NEL0 328 aa11.34□□□□□ -0.59
VEGFA-201ENST00000230480 BPIFB6Q8NFQ5 453 aa11.34□□□□□ -0.59
VEGFA-201ENST00000230480 UPRTQ96BW1 309 aa11.34□□□□□ -0.59
VEGFA-201ENST00000230480 SDSLQ96GA7 329 aa11.34□□□□□ -0.59
VEGFA-201ENST00000230480 TECTBQ96PL2 329 aa11.34□□□□□ -0.59
VEGFA-201ENST00000230480 TBX15Q96SF7 602 aa11.34□□□□□ -0.59
VEGFA-201ENST00000230480 NUDT16L1Q9BRJ7 211 aaKnown RBP11.34□□□□□ -0.59
VEGFA-201ENST00000230480 DUSP21Q9H596 190 aa11.34□□□□□ -0.59
VEGFA-201ENST00000230480 CNOT2Q9NZN8 540 aaKnown RBP11.34□□□□□ -0.59
VEGFA-201ENST00000230480 NLKQ9UBE8 527 aa11.34□□□□□ -0.59
VEGFA-201ENST00000230480 IL36RNQ9UBH0 155 aa11.34□□□□□ -0.59
VEGFA-201ENST00000230480 CLN8Q9UBY8 286 aa11.34□□□□□ -0.59
VEGFA-201ENST00000230480 TRBV5-5A0A0J9YX44 114 aa11.33□□□□□ -0.6
VEGFA-201ENST00000230480 FAM230AA0A1W2PPH8 454 aa11.33□□□□□ -0.6
VEGFA-201ENST00000230480 OR2AT4A6NND4 320 aa11.33□□□□□ -0.6
VEGFA-201ENST00000230480 H3BMQ9 156 aa11.33□□□□□ -0.6
VEGFA-201ENST00000230480 SLC1A7O00341 560 aa11.33□□□□□ -0.6
VEGFA-201ENST00000230480 SIGLEC5O15389 551 aa11.33□□□□□ -0.6
VEGFA-201ENST00000230480 TMPRSS2O15393 492 aa11.33□□□□□ -0.6
VEGFA-201ENST00000230480 VENTXO95231 258 aa11.33□□□□□ -0.6
VEGFA-201ENST00000230480 MT-ND2P03891 347 aa11.33□□□□□ -0.6
VEGFA-201ENST00000230480 GLRA1P23415 457 aa11.33□□□□□ -0.6
VEGFA-201ENST00000230480 NPBWR2P48146 333 aa11.33□□□□□ -0.6
VEGFA-201ENST00000230480 FUT6P51993 359 aa11.33□□□□□ -0.6
VEGFA-201ENST00000230480 GP2P55259 537 aaKnown RBP11.33□□□□□ -0.6
VEGFA-201ENST00000230480 IL24Q13007 206 aa11.33□□□□□ -0.6
VEGFA-201ENST00000230480 NDUFA5Q16718 116 aa11.33□□□□□ -0.6
VEGFA-201ENST00000230480 MICBQ29980 383 aa11.33□□□□□ -0.6
VEGFA-201ENST00000230480 RPL22L1Q6P5R6 122 aaKnown RBP11.33□□□□□ -0.6
VEGFA-201ENST00000230480 C16orf87Q6PH81 154 aa11.33□□□□□ -0.6
VEGFA-201ENST00000230480 AHSA2Q719I0 299 aa11.33□□□□□ -0.6
VEGFA-201ENST00000230480 BTN2A1Q7KYR7 527 aa11.33□□□□□ -0.6
VEGFA-201ENST00000230480 C11orf42Q8N5U0 333 aa11.33□□□□□ -0.6
VEGFA-201ENST00000230480 NANOGP1Q8N7R0 232 aa11.33□□□□□ -0.6
VEGFA-201ENST00000230480 ZNRF1Q8ND25 227 aa11.33□□□□□ -0.6
VEGFA-201ENST00000230480 DNAAF1Q8NEP3 725 aa11.33□□□□□ -0.6
VEGFA-201ENST00000230480 OR51A2Q8NGJ7 313 aa11.33□□□□□ -0.6
VEGFA-201ENST00000230480 OR52N1Q8NH53 320 aa11.33□□□□□ -0.6
VEGFA-201ENST00000230480 SPATA3Q8NHX4 192 aa11.33□□□□□ -0.6
VEGFA-201ENST00000230480 ZNF48Q96MX3 618 aaPredicted RBP11.33□□□□□ -0.6
VEGFA-201ENST00000230480 SPACA5Q96QH8 159 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms