RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 MEDAGQ5VYS4 303 aa11.65□□□□□ -0.54
GPN3-201ENST00000228827 LDLRAD3Q86YD5 345 aa11.65□□□□□ -0.54
GPN3-201ENST00000228827 C10orf67Q8IYJ2 551 aa11.65□□□□□ -0.54
GPN3-201ENST00000228827 OR2G2Q8NGZ5 317 aa11.65□□□□□ -0.54
GPN3-201ENST00000228827 SLC29A1Q99808 456 aa11.65□□□□□ -0.54
GPN3-201ENST00000228827 C9orf16Q9BUW7 83 aa11.65□□□□□ -0.54
GPN3-201ENST00000228827 PKIBQ9C010 78 aa11.65□□□□□ -0.54
GPN3-201ENST00000228827 METTL8Q9H825 291 aaKnown RBP11.65□□□□□ -0.54
GPN3-201ENST00000228827 C1RLQ9NZP8 487 aa11.65□□□□□ -0.54
GPN3-201ENST00000228827 CAB39Q9Y376 341 aaPredicted RBP11.65□□□□□ -0.54
GPN3-201ENST00000228827 MEIOCA2RUB1 952 aa11.64□□□□□ -0.55
GPN3-201ENST00000228827 J3QRE1 110 aa11.64□□□□□ -0.55
GPN3-201ENST00000228827 SLC16A6O15403 523 aa11.64□□□□□ -0.55
GPN3-201ENST00000228827 GPR137BO60478 399 aa11.64□□□□□ -0.55
GPN3-201ENST00000228827 GATBO75879 557 aaKnown RBP11.64□□□□□ -0.55
GPN3-201ENST00000228827 SERPINA3P01011 423 aa11.64□□□□□ -0.55
GPN3-201ENST00000228827 FUT6P51993 359 aa11.64□□□□□ -0.55
GPN3-201ENST00000228827 RELBQ01201 579 aa11.64□□□□□ -0.55
GPN3-201ENST00000228827 ZNF91Q05481 1191 aa11.64□□□□□ -0.55
GPN3-201ENST00000228827 IL24Q13007 206 aa11.64□□□□□ -0.55
GPN3-201ENST00000228827 ZBTB49Q6ZSB9 765 aa11.64□□□□□ -0.55
GPN3-201ENST00000228827 ENTHD1Q8IYW4 607 aa11.64□□□□□ -0.55
GPN3-201ENST00000228827 ZNF561Q8N587 486 aa11.64□□□□□ -0.55
GPN3-201ENST00000228827 FGGYQ96C11 551 aa11.64□□□□□ -0.55
GPN3-201ENST00000228827 LGALS12Q96DT0 336 aa11.64□□□□□ -0.55
GPN3-201ENST00000228827 ADAT3Q96EY9 351 aaPredicted RBP11.64□□□□□ -0.55
GPN3-201ENST00000228827 BORCS8Q96FH0 119 aa11.64□□□□□ -0.55
GPN3-201ENST00000228827 CHST5Q9GZS9 411 aa11.64□□□□□ -0.55
GPN3-201ENST00000228827 DPAGT1Q9H3H5 408 aa11.64□□□□□ -0.55
GPN3-201ENST00000228827 HES4Q9HCC6 221 aa11.64□□□□□ -0.55
GPN3-201ENST00000228827 MTCH1Q9NZJ7 389 aa11.64□□□□□ -0.55
GPN3-201ENST00000228827 FRRS1LQ9P0K9 344 aa11.64□□□□□ -0.55
GPN3-201ENST00000228827 SNTNA6NMZ2 147 aa11.63□□□□□ -0.55
GPN3-201ENST00000228827 POM121CA8CG34 1229 aa11.63□□□□□ -0.55
GPN3-201ENST00000228827 F8VVB4 439 aa11.63□□□□□ -0.55
GPN3-201ENST00000228827 F8VWA3 439 aa11.63□□□□□ -0.55
GPN3-201ENST00000228827 SPRY1O43609 319 aaPredicted RBP11.63□□□□□ -0.55
GPN3-201ENST00000228827 ANGPTL7O43827 346 aa11.63□□□□□ -0.55
GPN3-201ENST00000228827 BAG2O95816 211 aa11.63□□□□□ -0.55
GPN3-201ENST00000228827 PAHP00439 452 aa11.63□□□□□ -0.55
GPN3-201ENST00000228827 KNG1P01042 644 aa11.63□□□□□ -0.55
GPN3-201ENST00000228827 HTR1AP08908 422 aa11.63□□□□□ -0.55
GPN3-201ENST00000228827 FBP1P09467 338 aa11.63□□□□□ -0.55
GPN3-201ENST00000228827 PIPP12273 146 aaPredicted RBP11.63□□□□□ -0.55
GPN3-201ENST00000228827 ZNF20P17024 532 aa11.63□□□□□ -0.55
GPN3-201ENST00000228827 SAA4P35542 130 aa11.63□□□□□ -0.55
GPN3-201ENST00000228827 UBE2E1P51965 193 aa11.63□□□□□ -0.55
GPN3-201ENST00000228827 NANOS3P60323 173 aaKnown RBP11.63□□□□□ -0.55
GPN3-201ENST00000228827 ERVK11-1P61568 191 aa11.63□□□□□ -0.55
GPN3-201ENST00000228827 RPL31P62899 125 aaKnown RBP11.63□□□□□ -0.55
GPN3-201ENST00000228827 COL10A1Q03692 680 aa11.63□□□□□ -0.55
GPN3-201ENST00000228827 CNN3Q15417 329 aaKnown RBP11.63□□□□□ -0.55
GPN3-201ENST00000228827 TMEM244Q5VVB8 128 aa11.63□□□□□ -0.55
GPN3-201ENST00000228827 NCR3LG1Q68D85 454 aa11.63□□□□□ -0.55
GPN3-201ENST00000228827 C1orf122Q6ZSJ8 110 aa11.63□□□□□ -0.55
GPN3-201ENST00000228827 SLC25A26Q70HW3 274 aa11.63□□□□□ -0.55
GPN3-201ENST00000228827 MKXQ8IYA7 352 aa11.63□□□□□ -0.55
GPN3-201ENST00000228827 PQLC1Q8N2U9 271 aa11.63□□□□□ -0.55
GPN3-201ENST00000228827 ACBD7Q8N6N7 88 aa11.63□□□□□ -0.55
GPN3-201ENST00000228827 ASCC1Q8N9N2 400 aaKnown RBP11.63□□□□□ -0.55
GPN3-201ENST00000228827 CCDC54Q8NEL0 328 aa11.63□□□□□ -0.55
GPN3-201ENST00000228827 OR4F5Q8NH21 305 aa11.63□□□□□ -0.55
GPN3-201ENST00000228827 DYRK2Q92630 601 aa11.63□□□□□ -0.55
GPN3-201ENST00000228827 C4orf36Q96KX1 117 aa11.63□□□□□ -0.55
GPN3-201ENST00000228827 CEP19Q96LK0 163 aa11.63□□□□□ -0.55
GPN3-201ENST00000228827 BEX1Q9HBH7 125 aa11.63□□□□□ -0.55
GPN3-201ENST00000228827 AMBNQ9NP70 447 aa11.63□□□□□ -0.55
GPN3-201ENST00000228827 ZNRD1Q9P1U0 126 aa11.63□□□□□ -0.55
GPN3-201ENST00000228827 EXOGQ9Y2C4 368 aaKnown RBP11.63□□□□□ -0.55
GPN3-201ENST00000228827 MEX3AA1L020 520 aaKnown RBP11.63□□□□□ -0.55
GPN3-201ENST00000228827 TK1P04183 234 aa11.63□□□□□ -0.55
GPN3-201ENST00000228827 DBTP11182 482 aaKnown RBP11.63□□□□□ -0.55
GPN3-201ENST00000228827 CCL3L1P16619 93 aa11.63□□□□□ -0.55
GPN3-201ENST00000228827 GABRB1P18505 474 aa11.63□□□□□ -0.55
GPN3-201ENST00000228827 POU3F4P49335 361 aa11.63□□□□□ -0.55
GPN3-201ENST00000228827 ERVFRD-1P60508 538 aa11.63□□□□□ -0.55
GPN3-201ENST00000228827 SRSF4Q08170 494 aaKnown RBP11.63□□□□□ -0.55
GPN3-201ENST00000228827 TAF9Q16594 264 aa11.63□□□□□ -0.55
GPN3-201ENST00000228827 TMEM200BQ69YZ2 307 aa11.63□□□□□ -0.55
GPN3-201ENST00000228827 HCP5Q6MZN7 132 aa11.63□□□□□ -0.55
GPN3-201ENST00000228827 KCTD20Q7Z5Y7 419 aa11.63□□□□□ -0.55
GPN3-201ENST00000228827 LHFPL3Q86UP9 236 aa11.63□□□□□ -0.55
GPN3-201ENST00000228827 OR5D13Q8NGL4 314 aa11.63□□□□□ -0.55
GPN3-201ENST00000228827 OR10AC1Q8NH08 325 aa11.63□□□□□ -0.55
GPN3-201ENST00000228827 C17orf50Q8WW18 174 aa11.63□□□□□ -0.55
GPN3-201ENST00000228827 PP6455Q8WZ26 134 aa11.63□□□□□ -0.55
GPN3-201ENST00000228827 SF3B6Q9Y3B4 125 aaKnown RBP11.63□□□□□ -0.55
GPN3-201ENST00000228827 IGKV1-9A0A0C4DH69 117 aa11.62□□□□□ -0.55
GPN3-201ENST00000228827 LOC100130705A0A1B0GUX0 176 aa11.62□□□□□ -0.55
GPN3-201ENST00000228827 BTBD17A6NE02 478 aa11.62□□□□□ -0.55
GPN3-201ENST00000228827 CALCBP10092 127 aa11.62□□□□□ -0.55
GPN3-201ENST00000228827 RBP2P50120 134 aa11.62□□□□□ -0.55
GPN3-201ENST00000228827 ATP1B3P54709 279 aa11.62□□□□□ -0.55
GPN3-201ENST00000228827 ZNF273Q14593 569 aa11.62□□□□□ -0.55
GPN3-201ENST00000228827 EGFL6Q8IUX8 553 aa11.62□□□□□ -0.55
GPN3-201ENST00000228827 RHOXF1Q8NHV9 184 aa11.62□□□□□ -0.55
GPN3-201ENST00000228827 EMG1Q92979 244 aaKnown RBP11.62□□□□□ -0.55
GPN3-201ENST00000228827 C10orf35Q96D05 121 aa11.62□□□□□ -0.55
GPN3-201ENST00000228827 PELI1Q96FA3 418 aa11.62□□□□□ -0.55
GPN3-201ENST00000228827 ALG8Q9BVK2 526 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms