RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 CDH24Q86UP0 819 aa11.83□□□□□ -0.52
SEC61B-201ENST00000223641 TGIF2LYQ8IUE0 185 aa11.83□□□□□ -0.52
SEC61B-201ENST00000223641 GCSAMQ8N6F7 178 aa11.83□□□□□ -0.52
SEC61B-201ENST00000223641 MRPS24Q96EL2 167 aaKnown RBP11.83□□□□□ -0.52
SEC61B-201ENST00000223641 CMTM3Q96MX0 182 aa11.83□□□□□ -0.52
SEC61B-201ENST00000223641 CCL19Q99731 98 aa11.83□□□□□ -0.52
SEC61B-201ENST00000223641 METTL9Q9H1A3 318 aa11.83□□□□□ -0.52
SEC61B-201ENST00000223641 C1orf123Q9NWV4 160 aa11.83□□□□□ -0.52
SEC61B-201ENST00000223641 PTTG2Q9NZH5 202 aa11.83□□□□□ -0.52
SEC61B-201ENST00000223641 ING4Q9UNL4 249 aa11.83□□□□□ -0.52
SEC61B-201ENST00000223641 ETV7Q9Y603 341 aa11.83□□□□□ -0.52
SEC61B-201ENST00000223641 APCP25054 2843 aa11.82□□□□□ -0.52
SEC61B-201ENST00000223641 IGHV1-69-2A0A0G2JMI3 117 aa11.82□□□□□ -0.52
SEC61B-201ENST00000223641 TMEM272A0A1B0GTI8 110 aa11.82□□□□□ -0.52
SEC61B-201ENST00000223641 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.82□□□□□ -0.52
SEC61B-201ENST00000223641 TPD52L2O43399 206 aaKnown RBP11.82□□□□□ -0.52
SEC61B-201ENST00000223641 RP2O75695 350 aa11.82□□□□□ -0.52
SEC61B-201ENST00000223641 SNRPBP14678 240 aaKnown RBP11.82□□□□□ -0.52
SEC61B-201ENST00000223641 BCL3P20749 454 aa11.82□□□□□ -0.52
SEC61B-201ENST00000223641 NHLRC3Q5JS37 347 aa11.82□□□□□ -0.52
SEC61B-201ENST00000223641 Q8IYB0 196 aa11.82□□□□□ -0.52
SEC61B-201ENST00000223641 TMEM104Q8NE00 496 aa11.82□□□□□ -0.52
SEC61B-201ENST00000223641 OR51T1Q8NGJ9 327 aa11.82□□□□□ -0.52
SEC61B-201ENST00000223641 OR5H6Q8NGV6 325 aa11.82□□□□□ -0.52
SEC61B-201ENST00000223641 KCNG3Q8TAE7 436 aa11.82□□□□□ -0.52
SEC61B-201ENST00000223641 LGALS14Q8TCE9 139 aa11.82□□□□□ -0.52
SEC61B-201ENST00000223641 SLAMF9Q96A28 289 aa11.82□□□□□ -0.52
SEC61B-201ENST00000223641 POM121Q96HA1 1249 aa11.82□□□□□ -0.52
SEC61B-201ENST00000223641 CEP19Q96LK0 163 aa11.82□□□□□ -0.52
SEC61B-201ENST00000223641 S100A13Q99584 98 aa11.82□□□□□ -0.52
SEC61B-201ENST00000223641 MMP27Q9H306 513 aa11.82□□□□□ -0.52
SEC61B-201ENST00000223641 CXorf56Q9H5V9 222 aa11.82□□□□□ -0.52
SEC61B-201ENST00000223641 RNF7Q9UBF6 113 aa11.82□□□□□ -0.52
SEC61B-201ENST00000223641 CACNG2Q9Y698 323 aa11.82□□□□□ -0.52
SEC61B-201ENST00000223641 A0A1W2PP11 408 aa11.81□□□□□ -0.52
SEC61B-201ENST00000223641 TRAPPC2LH3BP13 241 aa11.81□□□□□ -0.52
SEC61B-201ENST00000223641 TMEM178BH3BS89 294 aa11.81□□□□□ -0.52
SEC61B-201ENST00000223641 AKR7A2O43488 359 aa11.81□□□□□ -0.52
SEC61B-201ENST00000223641 NDUFS7O75251 213 aa11.81□□□□□ -0.52
SEC61B-201ENST00000223641 FSTL3O95633 263 aa11.81□□□□□ -0.52
SEC61B-201ENST00000223641 RAB6AP20340 208 aa11.81□□□□□ -0.52
SEC61B-201ENST00000223641 COL8A2P25067 703 aa11.81□□□□□ -0.52
SEC61B-201ENST00000223641 BMXP51813 675 aa11.81□□□□□ -0.52
SEC61B-201ENST00000223641 EFNA4P52798 201 aa11.81□□□□□ -0.52
SEC61B-201ENST00000223641 FGF12P61328 243 aa11.81□□□□□ -0.52
SEC61B-201ENST00000223641 PLA2G7Q13093 441 aa11.81□□□□□ -0.52
SEC61B-201ENST00000223641 RSU1Q15404 277 aa11.81□□□□□ -0.52
SEC61B-201ENST00000223641 SLC22A6Q4U2R8 563 aa11.81□□□□□ -0.52
SEC61B-201ENST00000223641 OR10K2Q6IF99 312 aa11.81□□□□□ -0.52
SEC61B-201ENST00000223641 MZT2AQ6P582 158 aa11.81□□□□□ -0.52
SEC61B-201ENST00000223641 OR11L1Q8NGX0 322 aa11.81□□□□□ -0.52
SEC61B-201ENST00000223641 OR10K1Q8NGX5 313 aa11.81□□□□□ -0.52
SEC61B-201ENST00000223641 MCFD2Q8NI22 146 aa11.81□□□□□ -0.52
SEC61B-201ENST00000223641 LRRC29Q8WV35 223 aa11.81□□□□□ -0.52
SEC61B-201ENST00000223641 NRGNQ92686 78 aa11.81□□□□□ -0.52
SEC61B-201ENST00000223641 RDH5Q92781 318 aa11.81□□□□□ -0.52
SEC61B-201ENST00000223641 HPS1Q92902 700 aa11.81□□□□□ -0.52
SEC61B-201ENST00000223641 YIPF5Q969M3 257 aa11.81□□□□□ -0.52
SEC61B-201ENST00000223641 ZNF488Q96MN9 340 aa11.81□□□□□ -0.52
SEC61B-201ENST00000223641 TM2D1Q9BX74 207 aa11.81□□□□□ -0.52
SEC61B-201ENST00000223641 CST11Q9H112 138 aa11.81□□□□□ -0.52
SEC61B-201ENST00000223641 ABCG5Q9H222 651 aa11.81□□□□□ -0.52
SEC61B-201ENST00000223641 KCNK15Q9H427 330 aa11.81□□□□□ -0.52
SEC61B-201ENST00000223641 HMG20AQ9NP66 347 aa11.81□□□□□ -0.52
SEC61B-201ENST00000223641 DLL4Q9NR61 685 aa11.81□□□□□ -0.52
SEC61B-201ENST00000223641 PCDHB16Q9NRJ7 776 aa11.81□□□□□ -0.52
SEC61B-201ENST00000223641 TMEM106BQ9NUM4 274 aa11.81□□□□□ -0.52
SEC61B-201ENST00000223641 DCAF16Q9NXF7 216 aa11.81□□□□□ -0.52
SEC61B-201ENST00000223641 RASL12Q9NYN1 266 aa11.81□□□□□ -0.52
SEC61B-201ENST00000223641 RAB22AQ9UL26 194 aa11.81□□□□□ -0.52
SEC61B-201ENST00000223641 AKAP6Q13023 2319 aa11.8□□□□□ -0.52
SEC61B-201ENST00000223641 hCG_1807616A0A1W2PRN6 198 aa11.8□□□□□ -0.52
SEC61B-201ENST00000223641 CTDSP2O14595 271 aa11.8□□□□□ -0.52
SEC61B-201ENST00000223641 CDC14BO60729 498 aa11.8□□□□□ -0.52
SEC61B-201ENST00000223641 CSTBP04080 98 aaKnown RBP11.8□□□□□ -0.52
SEC61B-201ENST00000223641 GTF2F2P13984 249 aa11.8□□□□□ -0.52
SEC61B-201ENST00000223641 EGR1P18146 543 aa11.8□□□□□ -0.52
SEC61B-201ENST00000223641 SERPINA2P20848 420 aa11.8□□□□□ -0.52
SEC61B-201ENST00000223641 RBMXP38159 391 aaKnown RBP11.8□□□□□ -0.52
SEC61B-201ENST00000223641 EFNB2P52799 333 aa11.8□□□□□ -0.52
SEC61B-201ENST00000223641 ACP7Q6ZNF0 438 aa11.8□□□□□ -0.52
SEC61B-201ENST00000223641 LINC00299Q6ZSB3 139 aa11.8□□□□□ -0.52
SEC61B-201ENST00000223641 BIVMQ86UB2 503 aa11.8□□□□□ -0.52
SEC61B-201ENST00000223641 FAM90A1Q86YD7 464 aa11.8□□□□□ -0.52
SEC61B-201ENST00000223641 FAM58AQ8N1B3 248 aa11.8□□□□□ -0.52
SEC61B-201ENST00000223641 OSR2Q8N2R0 312 aa11.8□□□□□ -0.52
SEC61B-201ENST00000223641 FAM89BQ8N5H3 189 aa11.8□□□□□ -0.52
SEC61B-201ENST00000223641 SLC25A38Q96DW6 304 aa11.8□□□□□ -0.52
SEC61B-201ENST00000223641 GSX2Q9BZM3 304 aa11.8□□□□□ -0.52
SEC61B-201ENST00000223641 LPAR5Q9H1C0 372 aa11.8□□□□□ -0.52
SEC61B-201ENST00000223641 WDR13Q9H1Z4 485 aa11.8□□□□□ -0.52
SEC61B-201ENST00000223641 MIXL1Q9H2W2 232 aa11.8□□□□□ -0.52
SEC61B-201ENST00000223641 SEBOXQ9HB31 216 aaPredicted RBP11.8□□□□□ -0.52
SEC61B-201ENST00000223641 RBFOX1Q9NWB1 397 aaKnown RBP11.8□□□□□ -0.52
SEC61B-201ENST00000223641 TREM2Q9NZC2 230 aa11.8□□□□□ -0.52
SEC61B-201ENST00000223641 COMMD3Q9UBI1 195 aa11.8□□□□□ -0.52
SEC61B-201ENST00000223641 NPTNQ9Y639 398 aa11.8□□□□□ -0.52
SEC61B-201ENST00000223641 USF3Q68DE3 2245 aa11.79□□□□□ -0.52
SEC61B-201ENST00000223641 LRRC30A6NM36 301 aa11.79□□□□□ -0.52
SEC61B-201ENST00000223641 WNT9BO14905 357 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms