RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 ARPC3O15145 178 aa9.38□□□□□ -0.91
VPS18-201ENST00000220509 TPT1P13693 172 aaKnown RBP9.38□□□□□ -0.91
VPS18-201ENST00000220509 CSNK2A1P68400 391 aaPredicted RBP9.38□□□□□ -0.91
VPS18-201ENST00000220509 NKX6-1P78426 367 aaPredicted RBP9.38□□□□□ -0.91
VPS18-201ENST00000220509 DCAF12Q5T6F0 453 aa9.38□□□□□ -0.91
VPS18-201ENST00000220509 HIST2H3PS2Q5TEC6 136 aa9.38□□□□□ -0.91
VPS18-201ENST00000220509 TUSC5Q8IXB3 177 aa9.38□□□□□ -0.91
VPS18-201ENST00000220509 CSNK2A3Q8NEV1 391 aa9.38□□□□□ -0.91
VPS18-201ENST00000220509 OR52M1Q8NGK5 317 aa9.38□□□□□ -0.91
VPS18-201ENST00000220509 WNT16Q9UBV4 365 aa9.38□□□□□ -0.91
VPS18-201ENST00000220509 CSAG2Q9Y5P2 127 aa9.38□□□□□ -0.91
VPS18-201ENST00000220509 URGCP-MRPS24S4R325 110 aa9.38□□□□□ -0.91
VPS18-201ENST00000220509 LOC107986453A0A1B0GWG9 222 aa9.38□□□□□ -0.91
VPS18-201ENST00000220509 ZNF850A8MQ14 1090 aa9.38□□□□□ -0.91
VPS18-201ENST00000220509 TFPI2P48307 235 aa9.38□□□□□ -0.91
VPS18-201ENST00000220509 CEBPEQ15744 281 aa9.38□□□□□ -0.91
VPS18-201ENST00000220509 YRDCQ86U90 279 aaKnown RBP9.38□□□□□ -0.91
VPS18-201ENST00000220509 ZNF679Q8IYX0 411 aa9.38□□□□□ -0.91
VPS18-201ENST00000220509 OR51A4Q8NGJ6 313 aa9.38□□□□□ -0.91
VPS18-201ENST00000220509 AKR1E2Q96JD6 320 aa9.38□□□□□ -0.91
VPS18-201ENST00000220509 ABHD6Q9BV23 337 aa9.38□□□□□ -0.91
VPS18-201ENST00000220509 TXNIPQ9H3M7 391 aa9.38□□□□□ -0.91
VPS18-201ENST00000220509 ACKR4Q9NPB9 350 aa9.38□□□□□ -0.91
VPS18-201ENST00000220509 CHST11Q9NPF2 352 aa9.38□□□□□ -0.91
VPS18-201ENST00000220509 HIF1ANQ9NWT6 349 aa9.38□□□□□ -0.91
VPS18-201ENST00000220509 RASL12Q9NYN1 266 aa9.38□□□□□ -0.91
VPS18-201ENST00000220509 STEAP1Q9UHE8 339 aa9.38□□□□□ -0.91
VPS18-201ENST00000220509 LRRK1Q38SD2 2015 aa9.38□□□□□ -0.91
VPS18-201ENST00000220509 IGHV3-15A0A0B4J1V0 119 aa9.38□□□□□ -0.91
VPS18-201ENST00000220509 HMSDA8MTL9 139 aa9.38□□□□□ -0.91
VPS18-201ENST00000220509 PPIHO43447 177 aaKnown RBP9.38□□□□□ -0.91
VPS18-201ENST00000220509 THY1P04216 161 aa9.38□□□□□ -0.91
VPS18-201ENST00000220509 HOXB5P09067 269 aa9.38□□□□□ -0.91
VPS18-201ENST00000220509 MMP7P09237 267 aaPredicted RBP9.38□□□□□ -0.91
VPS18-201ENST00000220509 GABRR1P24046 479 aa9.38□□□□□ -0.91
VPS18-201ENST00000220509 S100GP29377 79 aa9.38□□□□□ -0.91
VPS18-201ENST00000220509 APOBEC1P41238 236 aaKnown RBP9.38□□□□□ -0.91
VPS18-201ENST00000220509 SLC37A1P57057 533 aa9.38□□□□□ -0.91
VPS18-201ENST00000220509 OR2A2Q6IF42 318 aa9.38□□□□□ -0.91
VPS18-201ENST00000220509 ANGPTL5Q86XS5 388 aa9.38□□□□□ -0.91
VPS18-201ENST00000220509 GABRG1Q8N1C3 465 aa9.38□□□□□ -0.91
VPS18-201ENST00000220509 SPTSSAQ969W0 71 aa9.38□□□□□ -0.91
VPS18-201ENST00000220509 HAVCR1Q96D42 359 aa9.38□□□□□ -0.91
VPS18-201ENST00000220509 ZNF426Q9BUY5 554 aa9.38□□□□□ -0.91
VPS18-201ENST00000220509 ZNF442Q9H7R0 627 aa9.38□□□□□ -0.91
VPS18-201ENST00000220509 PRRC2CQ9Y520 2896 aaKnown RBP9.38□□□□□ -0.91
VPS18-201ENST00000220509 CFAP54Q96N23 3096 aa9.38□□□□□ -0.91
VPS18-201ENST00000220509 TRAV1-2A0A0B4J238 106 aa9.37□□□□□ -0.91
VPS18-201ENST00000220509 GJE1A6NN92 205 aa9.37□□□□□ -0.91
VPS18-201ENST00000220509 MKRN2OSH3BPM6 223 aa9.37□□□□□ -0.91
VPS18-201ENST00000220509 ZIC2O95409 532 aaPredicted RBP9.37□□□□□ -0.91
VPS18-201ENST00000220509 IGHV2-5P01817 119 aa9.37□□□□□ -0.91
VPS18-201ENST00000220509 HOXA5P20719 270 aa9.37□□□□□ -0.91
VPS18-201ENST00000220509 RBMXP38159 391 aaKnown RBP9.37□□□□□ -0.91
VPS18-201ENST00000220509 ZNF658BQ4V348 819 aaPredicted RBP9.37□□□□□ -0.91
VPS18-201ENST00000220509 EMC4Q5J8M3 183 aa9.37□□□□□ -0.91
VPS18-201ENST00000220509 OR10G3Q8NGC4 313 aa9.37□□□□□ -0.91
VPS18-201ENST00000220509 OR5H2Q8NGV7 314 aa9.37□□□□□ -0.91
VPS18-201ENST00000220509 PTPMT1Q8WUK0 201 aaPredicted RBP9.37□□□□□ -0.91
VPS18-201ENST00000220509 MIB2Q96AX9 1013 aa9.37□□□□□ -0.91
VPS18-201ENST00000220509 SCGB3A2Q96PL1 93 aa9.37□□□□□ -0.91
VPS18-201ENST00000220509 TP53RKQ96S44 253 aa9.37□□□□□ -0.91
VPS18-201ENST00000220509 FOXD3Q9UJU5 478 aaPredicted RBP9.37□□□□□ -0.91
VPS18-201ENST00000220509 GBF1Q92538 1859 aa9.37□□□□□ -0.91
VPS18-201ENST00000220509 F6UZH7 168 aa9.37□□□□□ -0.91
VPS18-201ENST00000220509 PIN1P1O15428 100 aa9.37□□□□□ -0.91
VPS18-201ENST00000220509 CD79AP11912 226 aa9.37□□□□□ -0.91
VPS18-201ENST00000220509 RAB5AP20339 215 aa9.37□□□□□ -0.91
VPS18-201ENST00000220509 FUT7Q11130 342 aa9.37□□□□□ -0.91
VPS18-201ENST00000220509 DHRS2Q13268 280 aa9.37□□□□□ -0.91
VPS18-201ENST00000220509 NSUN5P2Q63ZY6 315 aa9.37□□□□□ -0.91
VPS18-201ENST00000220509 WFDC8Q8IUA0 241 aa9.37□□□□□ -0.91
VPS18-201ENST00000220509 FAM24BQ8N5W8 94 aa9.37□□□□□ -0.91
VPS18-201ENST00000220509 HAS2Q92819 552 aa9.37□□□□□ -0.91
VPS18-201ENST00000220509 RHOFQ9HBH0 211 aa9.37□□□□□ -0.91
VPS18-201ENST00000220509 NXT1Q9UKK6 140 aaKnown RBP9.37□□□□□ -0.91
VPS18-201ENST00000220509 SLC5A6Q9Y289 635 aa9.37□□□□□ -0.91
VPS18-201ENST00000220509 POLEQ07864 2286 aa9.37□□□□□ -0.91
VPS18-201ENST00000220509 TRAV8-7A0A075B6U6 113 aa9.37□□□□□ -0.91
VPS18-201ENST00000220509 OR2M5A3KFT3 312 aa9.37□□□□□ -0.91
VPS18-201ENST00000220509 SEC14L6B5MCN3 397 aa9.37□□□□□ -0.91
VPS18-201ENST00000220509 AQP8O94778 261 aa9.37□□□□□ -0.91
VPS18-201ENST00000220509 IL5P05113 134 aa9.37□□□□□ -0.91
VPS18-201ENST00000220509 TBPP20226 339 aa9.37□□□□□ -0.91
VPS18-201ENST00000220509 APLNRP35414 380 aa9.37□□□□□ -0.91
VPS18-201ENST00000220509 KLF3P57682 345 aaPredicted RBP9.37□□□□□ -0.91
VPS18-201ENST00000220509 CD81P60033 236 aa9.37□□□□□ -0.91
VPS18-201ENST00000220509 NANOS3P60323 173 aaKnown RBP9.37□□□□□ -0.91
VPS18-201ENST00000220509 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.37□□□□□ -0.91
VPS18-201ENST00000220509 ACOT7LQ6ZUV0 252 aa9.37□□□□□ -0.91
VPS18-201ENST00000220509 DND1Q8IYX4 353 aaKnown RBP9.37□□□□□ -0.91
VPS18-201ENST00000220509 GALNT16Q8N428 558 aa9.37□□□□□ -0.91
VPS18-201ENST00000220509 KCNRGQ8N5I3 272 aa9.37□□□□□ -0.91
VPS18-201ENST00000220509 OR2D3Q8NGH3 330 aa9.37□□□□□ -0.91
VPS18-201ENST00000220509 ZPLD1Q8TCW7 415 aa9.37□□□□□ -0.91
VPS18-201ENST00000220509 SLC39A7Q92504 469 aa9.37□□□□□ -0.91
VPS18-201ENST00000220509 SMIM12Q96EX1 92 aa9.37□□□□□ -0.91
VPS18-201ENST00000220509 ZNF479Q96JC4 524 aa9.37□□□□□ -0.91
VPS18-201ENST00000220509 LPAR2Q9HBW0 351 aa9.37□□□□□ -0.91
VPS18-201ENST00000220509 HELZP42694 1942 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms