RNA–Protein interactions for RNA: ENST00000003302.8

USP28-201, Transcript of ubiquitin specific peptidase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP28, Length 4,669 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-201ENST00000003302 YRDCQ86U90 279 aaKnown RBP9.29□□□□□ -0.92
USP28-201ENST00000003302 SVBPQ8N300 66 aa9.29□□□□□ -0.92
USP28-201ENST00000003302 HSD17B11Q8NBQ5 300 aa9.29□□□□□ -0.92
USP28-201ENST00000003302 AQP10Q96PS8 301 aa9.29□□□□□ -0.92
USP28-201ENST00000003302 KLF2Q9Y5W3 355 aaPredicted RBP9.29□□□□□ -0.92
USP28-201ENST00000003302 TNFSF12O43508 249 aa9.29□□□□□ -0.92
USP28-201ENST00000003302 IGLV3-1P01715 115 aa9.29□□□□□ -0.92
USP28-201ENST00000003302 UMODP07911 640 aa9.29□□□□□ -0.92
USP28-201ENST00000003302 ZNF44P15621 663 aa9.29□□□□□ -0.92
USP28-201ENST00000003302 COL8A2P25067 703 aa9.29□□□□□ -0.92
USP28-201ENST00000003302 FCGR2CP31995 323 aa9.29□□□□□ -0.92
USP28-201ENST00000003302 RAET1LQ5VY80 246 aa9.29□□□□□ -0.92
USP28-201ENST00000003302 SMIM8Q96KF7 97 aa9.29□□□□□ -0.92
USP28-201ENST00000003302 FGF23Q9GZV9 251 aaPredicted RBP9.29□□□□□ -0.92
USP28-201ENST00000003302 RNASEK-C17orf49H0YIS7 233 aa9.29□□□□□ -0.92
USP28-201ENST00000003302 H7C2Y5 167 aa9.29□□□□□ -0.92
USP28-201ENST00000003302 GPR37O15354 613 aa9.29□□□□□ -0.92
USP28-201ENST00000003302 FPR2P25090 351 aa9.29□□□□□ -0.92
USP28-201ENST00000003302 PIGPP57054 158 aa9.29□□□□□ -0.92
USP28-201ENST00000003302 DHRS7BQ6IAN0 325 aaPredicted RBP9.29□□□□□ -0.92
USP28-201ENST00000003302 GLYATL2Q8WU03 294 aa9.29□□□□□ -0.92
USP28-201ENST00000003302 SPACA9Q96E40 222 aaPredicted RBP9.29□□□□□ -0.92
USP28-201ENST00000003302 CCDC74BQ96LY2 380 aa9.29□□□□□ -0.92
USP28-201ENST00000003302 CDC6Q99741 560 aa9.29□□□□□ -0.92
USP28-201ENST00000003302 CHRNA10Q9GZZ6 450 aa9.29□□□□□ -0.92
USP28-201ENST00000003302 CHRDQ9H2X0 955 aa9.29□□□□□ -0.92
USP28-201ENST00000003302 RPL12P30050 165 aaKnown RBP9.28□□□□□ -0.92
USP28-201ENST00000003302 BTNL8Q6UX41 500 aa9.28□□□□□ -0.92
USP28-201ENST00000003302 VASH2Q86V25 355 aa9.28□□□□□ -0.92
USP28-201ENST00000003302 OR6X1Q8NH79 312 aa9.28□□□□□ -0.92
USP28-201ENST00000003302 PLEKHJ1Q9NW61 149 aa9.28□□□□□ -0.92
USP28-201ENST00000003302 GLS2Q9UI32 602 aa9.28□□□□□ -0.92
USP28-201ENST00000003302 TRBV23-1A0A0A0MS06 115 aa9.28□□□□□ -0.92
USP28-201ENST00000003302 ZNF503-AS2A6NEH8 195 aa9.28□□□□□ -0.92
USP28-201ENST00000003302 AQP7P3A6NL99 342 aa9.28□□□□□ -0.92
USP28-201ENST00000003302 CDRT15L2A8MXV6 281 aa9.28□□□□□ -0.92
USP28-201ENST00000003302 ETV2O00321 342 aaPredicted RBP9.28□□□□□ -0.92
USP28-201ENST00000003302 EPHA1P21709 976 aa9.28□□□□□ -0.92
USP28-201ENST00000003302 CCL1P22362 96 aa9.28□□□□□ -0.92
USP28-201ENST00000003302 OMGP23515 440 aa9.28□□□□□ -0.92
USP28-201ENST00000003302 UBALD1Q8TB05 177 aa9.28□□□□□ -0.92
USP28-201ENST00000003302 NAT6Q93015 286 aa9.28□□□□□ -0.92
USP28-201ENST00000003302 C14orf79Q96F83 325 aa9.28□□□□□ -0.92
USP28-201ENST00000003302 MAGT1Q9H0U3 335 aa9.28□□□□□ -0.92
USP28-201ENST00000003302 CARHSP1Q9Y2V2 147 aaKnown RBP9.28□□□□□ -0.92
USP28-201ENST00000003302 ARFGEF3Q5TH69 2177 aa9.28□□□□□ -0.92
USP28-201ENST00000003302 M0R135 149 aa9.28□□□□□ -0.92
USP28-201ENST00000003302 PDGFBP01127 241 aaPredicted RBP9.28□□□□□ -0.92
USP28-201ENST00000003302 JMJD7P0C870 316 aa9.28□□□□□ -0.92
USP28-201ENST00000003302 SRFP11831 508 aa9.28□□□□□ -0.92
USP28-201ENST00000003302 SUCLG1P53597 346 aaKnown RBP9.28□□□□□ -0.92
USP28-201ENST00000003302 MIDNQ504T8 468 aa9.28□□□□□ -0.92
USP28-201ENST00000003302 OR10AD1Q8NGE0 317 aa9.28□□□□□ -0.92
USP28-201ENST00000003302 ARL11Q969Q4 196 aa9.28□□□□□ -0.92
USP28-201ENST00000003302 ZNF799Q96GE5 643 aa9.28□□□□□ -0.92
USP28-201ENST00000003302 MRGPRX4Q96LA9 322 aa9.28□□□□□ -0.92
USP28-201ENST00000003302 CNTNAP3BQ96NU0 1288 aa9.28□□□□□ -0.92
USP28-201ENST00000003302 TP53RKQ96S44 253 aa9.28□□□□□ -0.92
USP28-201ENST00000003302 CNTNAP3Q9BZ76 1288 aa9.28□□□□□ -0.92
USP28-201ENST00000003302 CRLF2Q9HC73 371 aa9.28□□□□□ -0.92
USP28-201ENST00000003302 RAB19A4D1S5 217 aa9.28□□□□□ -0.92
USP28-201ENST00000003302 MTRF1O75570 445 aaKnown RBP9.28□□□□□ -0.92
USP28-201ENST00000003302 ONECUT2O95948 504 aa9.28□□□□□ -0.92
USP28-201ENST00000003302 CAV2P51636 162 aa9.28□□□□□ -0.92
USP28-201ENST00000003302 MTCP1P56278 107 aa9.28□□□□□ -0.92
USP28-201ENST00000003302 MISPQ8IVT2 679 aa9.28□□□□□ -0.92
USP28-201ENST00000003302 TMEM123Q8N131 208 aa9.28□□□□□ -0.92
USP28-201ENST00000003302 ARRDC1Q8N5I2 433 aa9.28□□□□□ -0.92
USP28-201ENST00000003302 HPSE2Q8WWQ2 592 aa9.28□□□□□ -0.92
USP28-201ENST00000003302 EMG1Q92979 244 aaKnown RBP9.28□□□□□ -0.92
USP28-201ENST00000003302 ZNF845Q96IR2 970 aaPredicted RBP9.28□□□□□ -0.92
USP28-201ENST00000003302 C2orf50Q96LR7 162 aa9.28□□□□□ -0.92
USP28-201ENST00000003302 RAB18Q9NP72 206 aa9.28□□□□□ -0.92
USP28-201ENST00000003302 MMP26Q9NRE1 261 aa9.28□□□□□ -0.92
USP28-201ENST00000003302 FBLN5Q9UBX5 448 aa9.28□□□□□ -0.92
USP28-201ENST00000003302 ZNF107Q9UII5 783 aaPredicted RBP9.28□□□□□ -0.92
USP28-201ENST00000003302 FBXO7Q9Y3I1 522 aa9.28□□□□□ -0.92
USP28-201ENST00000003302 TRAV39A0A0B4J263 110 aa9.27□□□□□ -0.93
USP28-201ENST00000003302 A0A1W2PPE2 198 aa9.27□□□□□ -0.93
USP28-201ENST00000003302 TMEM50AO95807 157 aa9.27□□□□□ -0.93
USP28-201ENST00000003302 GSTP1P09211 210 aaKnown RBP9.27□□□□□ -0.93
USP28-201ENST00000003302 OR5H8P0DN80 308 aa9.27□□□□□ -0.93
USP28-201ENST00000003302 HAGHQ16775 308 aa9.27□□□□□ -0.93
USP28-201ENST00000003302 CHRFAM7AQ494W8 412 aa9.27□□□□□ -0.93
USP28-201ENST00000003302 FAHD2BQ6P2I3 314 aaPredicted RBP9.27□□□□□ -0.93
USP28-201ENST00000003302 ODF3L1Q8IXM7 274 aa9.27□□□□□ -0.93
USP28-201ENST00000003302 FAHD2AQ96GK7 314 aa9.27□□□□□ -0.93
USP28-201ENST00000003302 FANCFQ9NPI8 374 aa9.27□□□□□ -0.93
USP28-201ENST00000003302 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.27□□□□□ -0.93
USP28-201ENST00000003302 A0A1W2PPH5 198 aa9.27□□□□□ -0.93
USP28-201ENST00000003302 ZNF726A6NNF4 738 aa9.27□□□□□ -0.93
USP28-201ENST00000003302 CD5P06127 495 aa9.27□□□□□ -0.93
USP28-201ENST00000003302 LYL1P12980 280 aa9.27□□□□□ -0.93
USP28-201ENST00000003302 CPT2P23786 658 aa9.27□□□□□ -0.93
USP28-201ENST00000003302 OR2B8PP59922 312 aa9.27□□□□□ -0.93
USP28-201ENST00000003302 ZNF616Q08AN1 781 aa9.27□□□□□ -0.93
USP28-201ENST00000003302 PCOLCEQ15113 449 aa9.27□□□□□ -0.93
USP28-201ENST00000003302 FAM53AQ6NSI3 398 aaPredicted RBP9.27□□□□□ -0.93
USP28-201ENST00000003302 Q96M66 194 aa9.27□□□□□ -0.93
USP28-201ENST00000003302 TGIF2Q9GZN2 237 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms