RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Timp2P25785 220 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Gabrb1P50571 474 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr18Q0VAX9 331 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Slc2a12Q8BFW9 622 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Lrrc61Q8R2R5 259 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Tomm34Q9CYG7 309 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr653E9PVA0 317 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Ugt8Q64676 541 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Timd4Q6U7R4 343 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Ikzf5Q8BU00 419 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Tctex1d1Q9D5I4 173 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Ergic1Q9DC16 290 aaKnown RBP10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr887Q9EQA6 309 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Gm31371A0A1D5RM70 265 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 1700001O22RikA2APZ1 375 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Tmem229aB9EJI9 371 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr543E9PWI5 336 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Vmn2r83E9Q0G7 864 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Vmn1r152E9Q9N3 307 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Vmn1r104L7N293 307 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 GzmaP11032 260 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Cpeb1P70166 561 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Defb25Q30KN8 71 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Selenbp2Q63836 472 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Znf728Q6P5C7 752 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Znf770Q8BIQ8 705 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Slc17a5Q8BN82 495 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Acaa1bQ8VCH0 424 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr60Q8VGL4 311 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Pofut1Q91ZW2 393 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Acaa1aQ921H8 424 aaKnown RBP10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Plrg1Q922V4 513 aaKnown RBP10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 L3hypdhQ9CXA2 354 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Emg1O35130 244 aaKnown RBP10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 DffbO54788 344 aaKnown RBP10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Csf3P09920 208 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr1000Q7TR99 314 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr720Q8VF37 316 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr262Q8VFV8 312 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr478Q8VG04 314 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 A630073D07RikE9PWS6 100 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 IghmP01872 454 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Htr1bP28334 386 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Gnb2P62880 340 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Klhdc8bQ9D2D9 354 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Ropn1lQ9EQ00 218 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Scamp2Q9ERN0 329 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 P2rx6O54803 389 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr728Q7TRM6 311 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Ell3Q80VR2 395 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Gabarapl1Q8R3R8 117 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Usp3Q91W36 520 aaKnown RBP10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 RabifQ91X96 123 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 NpvfQ9ESQ8 188 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Vmn1r120K7N6J6 305 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Hmgn2P09602 90 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 VtnP29788 478 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Elavl1P70372 326 aaKnown RBP10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr9Q60885 312 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 G6pc3Q6NSQ9 346 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr266Q8VFC3 316 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr1444Q8VFX2 319 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr583Q8VG25 319 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 PvrigA0A1B0GS01 234 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Zfp930A0A1D5RM15 441 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 DhodhO35435 395 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Prss2P07146 246 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Glra1Q64018 457 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr497Q8VG08 314 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Csnk1eQ9JMK2 416 aaKnown RBP10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Znf346Q9R0B7 294 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Rnf148G3X9R7 316 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Mtnd4lP03903 98 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Hoxd4P10628 250 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Hmx3P42581 356 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Vmn1r15Q14C10 299 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 ErasQ7TN89 227 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Lmf2Q8C3X8 702 aaKnown RBP10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr229Q8VFN5 307 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Epdr1Q99M71 224 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Hspb2Q99PR8 182 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Vmn1r61W4VSP5 300 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Gm4565A0A140LJ87 301 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Mamdc4A2AJA7 1228 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Vmn1r5B2RQT2 315 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 D7Ertd443eD2J0Y4 644 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Gm6176J3QK59 301 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Rps16P14131 146 aaKnown RBP10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Fgf2P15655 154 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Oprd1P32300 372 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Rab7aP51150 207 aaKnown RBP10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Rack1P68040 317 aaKnown RBP10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Gm4567Q3UTA8 301 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Taar2Q5QD17 339 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr142Q60881 305 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 PigvQ7TPN3 493 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Acer1Q8R4X1 273 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Vmn1r51Q8VIC6 319 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Wdr81Q5ND34 1934 aa10.87□□□□□ -0.67
Trim56-201ENSMUST00000054384 Gm12666A2AMD0 254 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 64.4 ms