RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 CCNOP22674 350 aa14.7□□□□□ -0.06
PHGDH-229ENST00000641891 FPR2P25090 351 aa14.7□□□□□ -0.06
PHGDH-229ENST00000641891 SERPINF1P36955 418 aa14.7□□□□□ -0.06
PHGDH-229ENST00000641891 TAS2R46P59540 309 aa14.7□□□□□ -0.06
PHGDH-229ENST00000641891 SUPT4H1P63272 117 aaKnown RBP14.7□□□□□ -0.06
PHGDH-229ENST00000641891 TGIF1Q15583 401 aa14.7□□□□□ -0.06
PHGDH-229ENST00000641891 AANATQ16613 207 aa14.7□□□□□ -0.06
PHGDH-229ENST00000641891 PIGYQ3MUY2 71 aa14.7□□□□□ -0.06
PHGDH-229ENST00000641891 CHRFAM7AQ494W8 412 aa14.7□□□□□ -0.06
PHGDH-229ENST00000641891 TMEM128Q5BJH2 165 aa14.7□□□□□ -0.06
PHGDH-229ENST00000641891 BRICD5Q6PL45 260 aa14.7□□□□□ -0.06
PHGDH-229ENST00000641891 CLEC18BQ6UXF7 455 aa14.7□□□□□ -0.06
PHGDH-229ENST00000641891 LHFPL2Q6ZUX7 228 aa14.7□□□□□ -0.06
PHGDH-229ENST00000641891 PEG10Q86TG7 708 aaKnown RBP14.7□□□□□ -0.06
PHGDH-229ENST00000641891 BATF2Q8N1L9 274 aa14.7□□□□□ -0.06
PHGDH-229ENST00000641891 C1QTNF6Q9BXI9 259 aa14.7□□□□□ -0.06
PHGDH-229ENST00000641891 LINC00470Q9BZP3 86 aa14.7□□□□□ -0.06
PHGDH-229ENST00000641891 KIF25Q9UIL4 384 aa14.7□□□□□ -0.06
PHGDH-229ENST00000641891 TNFSF18Q9UNG2 199 aa14.7□□□□□ -0.06
PHGDH-229ENST00000641891 FREM1Q5H8C1 2179 aa14.7□□□□□ -0.06
PHGDH-229ENST00000641891 C5orf51A6NDU8 294 aa14.7□□□□□ -0.06
PHGDH-229ENST00000641891 NMBP08949 121 aa14.7□□□□□ -0.06
PHGDH-229ENST00000641891 GLRA1P23415 457 aa14.7□□□□□ -0.06
PHGDH-229ENST00000641891 OR8B8Q15620 311 aa14.7□□□□□ -0.06
PHGDH-229ENST00000641891 PLCXD3Q63HM9 321 aa14.7□□□□□ -0.06
PHGDH-229ENST00000641891 RPUSD3Q6P087 351 aaKnown RBP14.7□□□□□ -0.06
PHGDH-229ENST00000641891 OVCH2Q7RTZ1 564 aa14.7□□□□□ -0.06
PHGDH-229ENST00000641891 MDS2Q8NDY4 140 aa14.7□□□□□ -0.06
PHGDH-229ENST00000641891 TMEM185AQ8NFB2 350 aa14.7□□□□□ -0.06
PHGDH-229ENST00000641891 OR6K3Q8NGY3 331 aa14.7□□□□□ -0.06
PHGDH-229ENST00000641891 SCARB1Q8WTV0 552 aa14.7□□□□□ -0.06
PHGDH-229ENST00000641891 WBP1Q96G27 269 aa14.7□□□□□ -0.06
PHGDH-229ENST00000641891 SLX1AQ9BQ83 275 aa14.7□□□□□ -0.06
PHGDH-229ENST00000641891 C1QTNF5Q9BXJ0 243 aa14.7□□□□□ -0.06
PHGDH-229ENST00000641891 PRRG4Q9BZD6 226 aa14.7□□□□□ -0.06
PHGDH-229ENST00000641891 WDR13Q9H1Z4 485 aa14.7□□□□□ -0.06
PHGDH-229ENST00000641891 AK3Q9UIJ7 227 aa14.7□□□□□ -0.06
PHGDH-229ENST00000641891 NME2P1O60361 137 aa14.69□□□□□ -0.06
PHGDH-229ENST00000641891 SFT2D2O95562 160 aa14.69□□□□□ -0.06
PHGDH-229ENST00000641891 RLN2P04090 185 aa14.69□□□□□ -0.06
PHGDH-229ENST00000641891 SLC25A4P12235 298 aa14.69□□□□□ -0.06
PHGDH-229ENST00000641891 NME2P22392 152 aa14.69□□□□□ -0.06
PHGDH-229ENST00000641891 AGTR1P30556 359 aa14.69□□□□□ -0.06
PHGDH-229ENST00000641891 RRADP55042 308 aa14.69□□□□□ -0.06
PHGDH-229ENST00000641891 PPIAP62937 165 aaKnown RBP14.69□□□□□ -0.06
PHGDH-229ENST00000641891 PDCD1Q15116 288 aa14.69□□□□□ -0.06
PHGDH-229ENST00000641891 TMEM65Q6PI78 240 aa14.69□□□□□ -0.06
PHGDH-229ENST00000641891 ZNF100Q8IYN0 542 aa14.69□□□□□ -0.06
PHGDH-229ENST00000641891 RGCCQ9H4X1 137 aa14.69□□□□□ -0.06
PHGDH-229ENST00000641891 CRIM1Q9NZV1 1036 aa14.69□□□□□ -0.06
PHGDH-229ENST00000641891 RNF222A6NCQ9 220 aa14.68□□□□□ -0.06
PHGDH-229ENST00000641891 TEX46H3BTG2 121 aa14.68□□□□□ -0.06
PHGDH-229ENST00000641891 GEMIN2O14893 280 aaKnown RBP14.68□□□□□ -0.06
PHGDH-229ENST00000641891 ADAP1O75689 374 aa14.68□□□□□ -0.06
PHGDH-229ENST00000641891 SFTPBP07988 381 aa14.68□□□□□ -0.06
PHGDH-229ENST00000641891 ANKRD55Q3KP44 614 aa14.68□□□□□ -0.06
PHGDH-229ENST00000641891 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.68□□□□□ -0.06
PHGDH-229ENST00000641891 TMEM17Q86X19 198 aa14.68□□□□□ -0.06
PHGDH-229ENST00000641891 ZSCAN4Q8NAM6 433 aaPredicted RBP14.68□□□□□ -0.06
PHGDH-229ENST00000641891 VRK1Q99986 396 aaPredicted RBP14.68□□□□□ -0.06
PHGDH-229ENST00000641891 SULT4A1Q9BR01 284 aa14.68□□□□□ -0.06
PHGDH-229ENST00000641891 GPR160Q9UJ42 338 aa14.68□□□□□ -0.06
PHGDH-229ENST00000641891 ZNF391Q9UJN7 358 aa14.68□□□□□ -0.06
PHGDH-229ENST00000641891 TUBAL3A6NHL2 446 aa14.68□□□□□ -0.06
PHGDH-229ENST00000641891 ARGFXA6NJG6 315 aa14.68□□□□□ -0.06
PHGDH-229ENST00000641891 MPTX1A8MV57 137 aa14.68□□□□□ -0.06
PHGDH-229ENST00000641891 PDGFAP04085 211 aa14.68□□□□□ -0.06
PHGDH-229ENST00000641891 ASCL4Q6XD76 172 aa14.68□□□□□ -0.06
PHGDH-229ENST00000641891 NUFIP2Q7Z417 695 aaKnown RBP14.68□□□□□ -0.06
PHGDH-229ENST00000641891 SLC51BQ86UW2 128 aa14.68□□□□□ -0.06
PHGDH-229ENST00000641891 KCNRGQ8N5I3 272 aa14.68□□□□□ -0.06
PHGDH-229ENST00000641891 FER1L6-AS2Q96M78 137 aa14.68□□□□□ -0.06
PHGDH-229ENST00000641891 PRDM14Q9GZV8 571 aa14.68□□□□□ -0.06
PHGDH-229ENST00000641891 PARPBPQ9NWS1 579 aa14.68□□□□□ -0.06
PHGDH-229ENST00000641891 MBD2Q9UBB5 411 aa14.68□□□□□ -0.06
PHGDH-229ENST00000641891 ZNF407Q9C0G0 2248 aa14.68□□□□□ -0.06
PHGDH-229ENST00000641891 ZNF816-ZNF321PA0A0X1KG74 233 aa14.67□□□□□ -0.06
PHGDH-229ENST00000641891 ZNF850A8MQ14 1090 aa14.67□□□□□ -0.06
PHGDH-229ENST00000641891 XRCC2O43543 280 aa14.67□□□□□ -0.06
PHGDH-229ENST00000641891 CA11O75493 328 aa14.67□□□□□ -0.06
PHGDH-229ENST00000641891 OPRM1P35372 400 aa14.67□□□□□ -0.06
PHGDH-229ENST00000641891 PDZK1IP1Q13113 114 aa14.67□□□□□ -0.06
PHGDH-229ENST00000641891 TRIP6Q15654 476 aaKnown RBP14.67□□□□□ -0.06
PHGDH-229ENST00000641891 NRN1LQ496H8 165 aa14.67□□□□□ -0.06
PHGDH-229ENST00000641891 CALHM1Q8IU99 346 aa14.67□□□□□ -0.06
PHGDH-229ENST00000641891 FBXL14Q8N1E6 418 aa14.67□□□□□ -0.06
PHGDH-229ENST00000641891 ANGPTL6Q8NI99 470 aa14.67□□□□□ -0.06
PHGDH-229ENST00000641891 SPSB4Q96A44 273 aa14.67□□□□□ -0.06
PHGDH-229ENST00000641891 CPNE2Q96FN4 548 aaPredicted RBP14.67□□□□□ -0.06
PHGDH-229ENST00000641891 DEFB127Q9H1M4 99 aa14.67□□□□□ -0.06
PHGDH-229ENST00000641891 KLF13Q9Y2Y9 288 aaPredicted RBP14.67□□□□□ -0.06
PHGDH-229ENST00000641891 A0A0D9SG52 128 aa14.67□□□□□ -0.06
PHGDH-229ENST00000641891 FAM221AA4D161 298 aa14.67□□□□□ -0.06
PHGDH-229ENST00000641891 C5orf49A4QMS7 147 aa14.67□□□□□ -0.06
PHGDH-229ENST00000641891 RPL36A-HNRNPH2H7BZ11 118 aa14.67□□□□□ -0.06
PHGDH-229ENST00000641891 ZNF205O95201 554 aa14.67□□□□□ -0.06
PHGDH-229ENST00000641891 CD79AP11912 226 aa14.67□□□□□ -0.06
PHGDH-229ENST00000641891 RPS2P15880 293 aaKnown RBP14.67□□□□□ -0.06
PHGDH-229ENST00000641891 CHATP28329 748 aa14.67□□□□□ -0.06
PHGDH-229ENST00000641891 FUT6P51993 359 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms