RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 SLC1A7O00341 560 aa22.19■■□□□ 1.14
VEGFA-231ENST00000640499 NDUFA2O43678 99 aa22.19■■□□□ 1.14
VEGFA-231ENST00000640499 CCDC159P0C7I6 412 aa22.19■■□□□ 1.14
VEGFA-231ENST00000640499 FAM157CP0CG43 387 aa22.19■■□□□ 1.14
VEGFA-231ENST00000640499 GNB2P62879 340 aa22.19■■□□□ 1.14
VEGFA-231ENST00000640499 KCNJ8Q15842 424 aa22.19■■□□□ 1.14
VEGFA-231ENST00000640499 MICBQ29980 383 aa22.19■■□□□ 1.14
VEGFA-231ENST00000640499 CCDC58Q4VC31 144 aa22.19■■□□□ 1.14
VEGFA-231ENST00000640499 DCAF12L2Q5VW00 463 aa22.19■■□□□ 1.14
VEGFA-231ENST00000640499 UTS2BQ765I0 119 aa22.19■■□□□ 1.14
VEGFA-231ENST00000640499 ZNF573Q86YE8 665 aa22.19■■□□□ 1.14
VEGFA-231ENST00000640499 OR4M2Q8NGB6 313 aa22.19■■□□□ 1.14
VEGFA-231ENST00000640499 HAVCR2Q8TDQ0 301 aa22.19■■□□□ 1.14
VEGFA-231ENST00000640499 PP6455Q8WZ26 134 aa22.19■■□□□ 1.14
VEGFA-231ENST00000640499 INSIG2Q9Y5U4 225 aa22.19■■□□□ 1.14
VEGFA-231ENST00000640499 ATF1P18846 271 aa22.18■■□□□ 1.14
VEGFA-231ENST00000640499 ATPAF1Q5TC12 328 aaPredicted RBP22.18■■□□□ 1.14
VEGFA-231ENST00000640499 ASPHD2Q6ICH7 369 aa22.18■■□□□ 1.14
VEGFA-231ENST00000640499 CRIP3Q6Q6R5 217 aa22.18■■□□□ 1.14
VEGFA-231ENST00000640499 NLRC3Q7RTR2 1065 aa22.18■■□□□ 1.14
VEGFA-231ENST00000640499 POC1AQ8NBT0 407 aa22.18■■□□□ 1.14
VEGFA-231ENST00000640499 OR13C3Q8NGS6 347 aa22.18■■□□□ 1.14
VEGFA-231ENST00000640499 ANGPTL6Q8NI99 470 aa22.18■■□□□ 1.14
VEGFA-231ENST00000640499 ZNF671Q8TAW3 534 aa22.18■■□□□ 1.14
VEGFA-231ENST00000640499 C12orf43Q96C57 262 aaKnown RBP22.18■■□□□ 1.14
VEGFA-231ENST00000640499 RRP15Q9Y3B9 282 aaKnown RBP22.18■■□□□ 1.14
VEGFA-231ENST00000640499 C22orf46C9J442 243 aa22.17■■□□□ 1.14
VEGFA-231ENST00000640499 NOS1APO75052 506 aaPredicted RBP22.17■■□□□ 1.14
VEGFA-231ENST00000640499 GATBO75879 557 aaKnown RBP22.17■■□□□ 1.14
VEGFA-231ENST00000640499 PGA5P0DJD9 388 aa22.17■■□□□ 1.14
VEGFA-231ENST00000640499 PCMT1P22061 227 aa22.17■■□□□ 1.14
VEGFA-231ENST00000640499 FUT6P51993 359 aa22.17■■□□□ 1.14
VEGFA-231ENST00000640499 DMKNQ6E0U4 476 aaPredicted RBP22.17■■□□□ 1.14
VEGFA-231ENST00000640499 STX19Q8N4C7 294 aa22.17■■□□□ 1.14
VEGFA-231ENST00000640499 CLN8Q9UBY8 286 aa22.17■■□□□ 1.14
VEGFA-231ENST00000640499 SLC7A11Q9UPY5 501 aa22.17■■□□□ 1.14
VEGFA-231ENST00000640499 LOC105371242A0A075B767 164 aa22.16■■□□□ 1.14
VEGFA-231ENST00000640499 PTGES3LE9PB15 166 aa22.16■■□□□ 1.14
VEGFA-231ENST00000640499 J3QLI3 93 aa22.16■■□□□ 1.14
VEGFA-231ENST00000640499 SERPINA3P01011 423 aa22.16■■□□□ 1.14
VEGFA-231ENST00000640499 CDK1P06493 297 aa22.16■■□□□ 1.14
VEGFA-231ENST00000640499 SELLP14151 372 aa22.16■■□□□ 1.14
VEGFA-231ENST00000640499 GLRA1P23415 457 aa22.16■■□□□ 1.14
VEGFA-231ENST00000640499 GATA3P23771 443 aa22.16■■□□□ 1.14
VEGFA-231ENST00000640499 BATF2Q8N1L9 274 aa22.16■■□□□ 1.14
VEGFA-231ENST00000640499 PARP16Q8N5Y8 322 aa22.16■■□□□ 1.14
VEGFA-231ENST00000640499 FAM216BQ8N7L0 139 aa22.16■■□□□ 1.14
VEGFA-231ENST00000640499 NANOGP1Q8N7R0 232 aa22.16■■□□□ 1.14
VEGFA-231ENST00000640499 ZFP41Q8N8Y5 198 aa22.16■■□□□ 1.14
VEGFA-231ENST00000640499 TECTBQ96PL2 329 aa22.16■■□□□ 1.14
VEGFA-231ENST00000640499 NRIP2Q9BQI9 281 aa22.16■■□□□ 1.14
VEGFA-231ENST00000640499 PKIBQ9C010 78 aa22.16■■□□□ 1.14
VEGFA-231ENST00000640499 C7orf69Q9H7B7 122 aa22.16■■□□□ 1.14
VEGFA-231ENST00000640499 CHCHD3Q9NX63 227 aaKnown RBP22.16■■□□□ 1.14
VEGFA-231ENST00000640499 NLKQ9UBE8 527 aa22.16■■□□□ 1.14
VEGFA-231ENST00000640499 ZNF222Q9UK12 451 aa22.16■■□□□ 1.14
VEGFA-231ENST00000640499 IGKV1D-17A0A075B6S4 117 aa22.15■■□□□ 1.14
VEGFA-231ENST00000640499 F8VVB4 439 aa22.15■■□□□ 1.14
VEGFA-231ENST00000640499 F8VWA3 439 aa22.15■■□□□ 1.14
VEGFA-231ENST00000640499 DVL1O14640 695 aa22.15■■□□□ 1.14
VEGFA-231ENST00000640499 TMPRSS2O15393 492 aa22.15■■□□□ 1.14
VEGFA-231ENST00000640499 PSG2P11465 335 aa22.15■■□□□ 1.14
VEGFA-231ENST00000640499 ZNF20P17024 532 aa22.15■■□□□ 1.14
VEGFA-231ENST00000640499 SRD5A1P18405 259 aa22.15■■□□□ 1.14
VEGFA-231ENST00000640499 ERVK11-1P61568 191 aa22.15■■□□□ 1.14
VEGFA-231ENST00000640499 SLC35A2P78381 396 aa22.15■■□□□ 1.14
VEGFA-231ENST00000640499 PAX8Q06710 450 aa22.15■■□□□ 1.14
VEGFA-231ENST00000640499 RNLSQ5VYX0 342 aa22.15■■□□□ 1.14
VEGFA-231ENST00000640499 ACP7Q6ZNF0 438 aa22.15■■□□□ 1.14
VEGFA-231ENST00000640499 ZNF788Q6ZQV5 615 aa22.15■■□□□ 1.14
VEGFA-231ENST00000640499 DNAAF1Q8NEP3 725 aa22.15■■□□□ 1.14
VEGFA-231ENST00000640499 GAFA1Q96PS6 74 aa22.15■■□□□ 1.14
VEGFA-231ENST00000640499 COMMD4Q9H0A8 199 aa22.15■■□□□ 1.14
VEGFA-231ENST00000640499 HES4Q9HCC6 221 aa22.15■■□□□ 1.14
VEGFA-231ENST00000640499 MTCH1Q9NZJ7 389 aa22.15■■□□□ 1.14
VEGFA-231ENST00000640499 DNAJB11Q9UBS4 358 aa22.15■■□□□ 1.14
VEGFA-231ENST00000640499 OR5V1Q9UGF6 321 aa22.15■■□□□ 1.14
VEGFA-231ENST00000640499 IGHV2-70DA0A0C4DH43 119 aa22.14■■□□□ 1.13
VEGFA-231ENST00000640499 KIR2DS1A0A191URI9 304 aa22.14■■□□□ 1.13
VEGFA-231ENST00000640499 OR2AT4A6NND4 320 aa22.14■■□□□ 1.13
VEGFA-231ENST00000640499 MT-ND2P03891 347 aa22.14■■□□□ 1.13
VEGFA-231ENST00000640499 ACAA1P09110 424 aaPredicted RBP22.14■■□□□ 1.13
VEGFA-231ENST00000640499 ADRA2CP18825 462 aa22.14■■□□□ 1.13
VEGFA-231ENST00000640499 AZGP1P25311 298 aaKnown RBP22.14■■□□□ 1.13
VEGFA-231ENST00000640499 VHLP40337 213 aa22.14■■□□□ 1.13
VEGFA-231ENST00000640499 IL24Q13007 206 aa22.14■■□□□ 1.13
VEGFA-231ENST00000640499 OR13C5Q8NGS8 318 aa22.14■■□□□ 1.13
VEGFA-231ENST00000640499 RAB40AQ8WXH6 277 aa22.14■■□□□ 1.13
VEGFA-231ENST00000640499 TMIGD2Q96BF3 282 aa22.14■■□□□ 1.13
VEGFA-231ENST00000640499 SMIM19Q96E16 107 aa22.14■■□□□ 1.13
VEGFA-231ENST00000640499 PGLYRP3Q96LB9 341 aa22.14■■□□□ 1.13
VEGFA-231ENST00000640499 DUSP21Q9H596 190 aa22.14■■□□□ 1.13
VEGFA-231ENST00000640499 RASL12Q9NYN1 266 aa22.14■■□□□ 1.13
VEGFA-231ENST00000640499 FSHBP01225 129 aa22.13■■□□□ 1.13
VEGFA-231ENST00000640499 HNF1AP20823 631 aa22.13■■□□□ 1.13
VEGFA-231ENST00000640499 HSPA13P48723 471 aa22.13■■□□□ 1.13
VEGFA-231ENST00000640499 NPY4RP50391 375 aa22.13■■□□□ 1.13
VEGFA-231ENST00000640499 RPS11P62280 158 aaKnown RBP eCLIP22.13■■□□□ 1.13
VEGFA-231ENST00000640499 MED21Q13503 144 aa22.13■■□□□ 1.13
VEGFA-231ENST00000640499 IRF3Q14653 427 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms