RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 CEACAM19Q7Z692 300 aa11.06□□□□□ -0.64
GTF3A-209ENST00000640289 OR52N4Q8NGI2 321 aa11.06□□□□□ -0.64
GTF3A-209ENST00000640289 OR5D18Q8NGL1 313 aa11.06□□□□□ -0.64
GTF3A-209ENST00000640289 OR10Z1Q8NGY1 313 aa11.06□□□□□ -0.64
GTF3A-209ENST00000640289 C18orf12Q96KH6 178 aa11.06□□□□□ -0.64
GTF3A-209ENST00000640289 NR1H4Q96RI1 486 aaPredicted RBP11.06□□□□□ -0.64
GTF3A-209ENST00000640289 GAL3ST1Q99999 423 aa11.06□□□□□ -0.64
GTF3A-209ENST00000640289 TMEM246Q9BRR3 403 aa11.06□□□□□ -0.64
GTF3A-209ENST00000640289 PPIL3Q9H2H8 161 aaKnown RBP11.06□□□□□ -0.64
GTF3A-209ENST00000640289 OTOGQ6ZRI0 2925 aa11.06□□□□□ -0.64
GTF3A-209ENST00000640289 ZNF469Q96JG9 3925 aaPredicted RBP11.06□□□□□ -0.64
GTF3A-209ENST00000640289 DYSFO75923 2080 aa11.05□□□□□ -0.64
GTF3A-209ENST00000640289 MYO9AB2RTY4 2548 aa11.05□□□□□ -0.64
GTF3A-209ENST00000640289 OOEPA6NGQ2 149 aa11.05□□□□□ -0.64
GTF3A-209ENST00000640289 CCRL2O00421 344 aa11.05□□□□□ -0.64
GTF3A-209ENST00000640289 GABRPO00591 440 aa11.05□□□□□ -0.64
GTF3A-209ENST00000640289 GPX5O75715 221 aa11.05□□□□□ -0.64
GTF3A-209ENST00000640289 RGS9O75916 674 aaPredicted RBP11.05□□□□□ -0.64
GTF3A-209ENST00000640289 TFF1P04155 84 aa11.05□□□□□ -0.64
GTF3A-209ENST00000640289 MAS1P04201 325 aa11.05□□□□□ -0.64
GTF3A-209ENST00000640289 INHBBP09529 407 aa11.05□□□□□ -0.64
GTF3A-209ENST00000640289 GLRA1P23415 457 aa11.05□□□□□ -0.64
GTF3A-209ENST00000640289 MAPK3P27361 379 aaPredicted RBP11.05□□□□□ -0.64
GTF3A-209ENST00000640289 GABRA5P31644 462 aa11.05□□□□□ -0.64
GTF3A-209ENST00000640289 PPP3R1P63098 170 aa11.05□□□□□ -0.64
GTF3A-209ENST00000640289 FABP5Q01469 135 aa11.05□□□□□ -0.64
GTF3A-209ENST00000640289 IL24Q13007 206 aa11.05□□□□□ -0.64
GTF3A-209ENST00000640289 KISS1Q15726 138 aa11.05□□□□□ -0.64
GTF3A-209ENST00000640289 ZNF404Q494X3 552 aa11.05□□□□□ -0.64
GTF3A-209ENST00000640289 TMEM155Q4W5P6 130 aa11.05□□□□□ -0.64
GTF3A-209ENST00000640289 SYT6Q5T7P8 510 aaPredicted RBP11.05□□□□□ -0.64
GTF3A-209ENST00000640289 TEX36Q5VZQ5 186 aa11.05□□□□□ -0.64
GTF3A-209ENST00000640289 LYPD2Q6UXB3 125 aa11.05□□□□□ -0.64
GTF3A-209ENST00000640289 SLC25A26Q70HW3 274 aa11.05□□□□□ -0.64
GTF3A-209ENST00000640289 SATL1Q86VE3 508 aa11.05□□□□□ -0.64
GTF3A-209ENST00000640289 FAM90A1Q86YD7 464 aa11.05□□□□□ -0.64
GTF3A-209ENST00000640289 MUC20Q8N307 709 aaPredicted RBP11.05□□□□□ -0.64
GTF3A-209ENST00000640289 POC1AQ8NBT0 407 aa11.05□□□□□ -0.64
GTF3A-209ENST00000640289 ZNF671Q8TAW3 534 aa11.05□□□□□ -0.64
GTF3A-209ENST00000640289 MUL1Q969V5 352 aa11.05□□□□□ -0.64
GTF3A-209ENST00000640289 SLAMF9Q96A28 289 aa11.05□□□□□ -0.64
GTF3A-209ENST00000640289 SMR3AQ99954 134 aa11.05□□□□□ -0.64
GTF3A-209ENST00000640289 PKIBQ9C010 78 aa11.05□□□□□ -0.64
GTF3A-209ENST00000640289 ZNF665Q9H7R5 613 aa11.05□□□□□ -0.64
GTF3A-209ENST00000640289 SNTG1Q9NSN8 517 aa11.05□□□□□ -0.64
GTF3A-209ENST00000640289 NDUFB11Q9NX14 153 aa11.05□□□□□ -0.64
GTF3A-209ENST00000640289 MTCH1Q9NZJ7 389 aa11.05□□□□□ -0.64
GTF3A-209ENST00000640289 TEX15Q9BXT5 2789 aa11.05□□□□□ -0.64
GTF3A-209ENST00000640289 IGKV1-12A0A0C4DH73 117 aa11.04□□□□□ -0.64
GTF3A-209ENST00000640289 CEACAM18A8MTB9 384 aa11.04□□□□□ -0.64
GTF3A-209ENST00000640289 FAM157AC9JC47 383 aa11.04□□□□□ -0.64
GTF3A-209ENST00000640289 F8VVB4 439 aa11.04□□□□□ -0.64
GTF3A-209ENST00000640289 F8VWA3 439 aa11.04□□□□□ -0.64
GTF3A-209ENST00000640289 ANGPTL7O43827 346 aa11.04□□□□□ -0.64
GTF3A-209ENST00000640289 IGKV1D-12P01611 117 aa11.04□□□□□ -0.64
GTF3A-209ENST00000640289 IGHV2-5P01817 119 aa11.04□□□□□ -0.64
GTF3A-209ENST00000640289 GYPAP02724 150 aa11.04□□□□□ -0.64
GTF3A-209ENST00000640289 UCHL1P09936 223 aa11.04□□□□□ -0.64
GTF3A-209ENST00000640289 PGA5P0DJD9 388 aa11.04□□□□□ -0.64
GTF3A-209ENST00000640289 SMIM18P0DKX4 95 aa11.04□□□□□ -0.64
GTF3A-209ENST00000640289 PSMA1P25786 263 aaKnown RBP11.04□□□□□ -0.64
GTF3A-209ENST00000640289 BDKRB2P30411 391 aa11.04□□□□□ -0.64
GTF3A-209ENST00000640289 ZP1P60852 638 aa11.04□□□□□ -0.64
GTF3A-209ENST00000640289 SEC61A1P61619 476 aaKnown RBP11.04□□□□□ -0.64
GTF3A-209ENST00000640289 PDZK1IP1Q13113 114 aa11.04□□□□□ -0.64
GTF3A-209ENST00000640289 TRAM1Q15629 374 aa11.04□□□□□ -0.64
GTF3A-209ENST00000640289 TMEM249Q2WGJ8 235 aa11.04□□□□□ -0.64
GTF3A-209ENST00000640289 DDI2Q5TDH0 399 aa11.04□□□□□ -0.64
GTF3A-209ENST00000640289 SPICQ8N5J4 248 aa11.04□□□□□ -0.64
GTF3A-209ENST00000640289 OR5T2Q8NGG2 359 aa11.04□□□□□ -0.64
GTF3A-209ENST00000640289 THRSPQ92748 146 aa11.04□□□□□ -0.64
GTF3A-209ENST00000640289 PATZ1Q9HBE1 687 aaKnown RBP11.04□□□□□ -0.64
GTF3A-209ENST00000640289 NEK6Q9HC98 313 aa11.04□□□□□ -0.64
GTF3A-209ENST00000640289 TMEM138Q9NPI0 162 aa11.04□□□□□ -0.64
GTF3A-209ENST00000640289 CKLFQ9UBR5 152 aa11.04□□□□□ -0.64
GTF3A-209ENST00000640289 DNAJB11Q9UBS4 358 aa11.04□□□□□ -0.64
GTF3A-209ENST00000640289 PCDHB10Q9UN67 800 aa11.04□□□□□ -0.64
GTF3A-209ENST00000640289 FOXJ3Q9UPW0 622 aa11.04□□□□□ -0.64
GTF3A-209ENST00000640289 POLDIP2Q9Y2S7 368 aa11.04□□□□□ -0.64
GTF3A-209ENST00000640289 TRAV38-1A0A0B4J264 116 aa11.03□□□□□ -0.64
GTF3A-209ENST00000640289 TRIM64CA6NLI5 447 aa11.03□□□□□ -0.64
GTF3A-209ENST00000640289 TNFRSF13BO14836 293 aaPredicted RBP11.03□□□□□ -0.64
GTF3A-209ENST00000640289 MAGEB3O15480 346 aa11.03□□□□□ -0.64
GTF3A-209ENST00000640289 NOS1APO75052 506 aaPredicted RBP11.03□□□□□ -0.64
GTF3A-209ENST00000640289 FSTL3O95633 263 aa11.03□□□□□ -0.64
GTF3A-209ENST00000640289 IGHV4-31P0DP07 118 aa11.03□□□□□ -0.64
GTF3A-209ENST00000640289 CALCBP10092 127 aa11.03□□□□□ -0.64
GTF3A-209ENST00000640289 ERVK11-1P61568 191 aa11.03□□□□□ -0.64
GTF3A-209ENST00000640289 KRTAP1-1Q07627 177 aa11.03□□□□□ -0.64
GTF3A-209ENST00000640289 MICBQ29980 383 aa11.03□□□□□ -0.64
GTF3A-209ENST00000640289 HSD17B12Q53GQ0 312 aa11.03□□□□□ -0.64
GTF3A-209ENST00000640289 ACP7Q6ZNF0 438 aa11.03□□□□□ -0.64
GTF3A-209ENST00000640289 OR51F2Q8NH61 342 aa11.03□□□□□ -0.64
GTF3A-209ENST00000640289 TMIGD2Q96BF3 282 aa11.03□□□□□ -0.64
GTF3A-209ENST00000640289 GPER1Q99527 375 aa11.03□□□□□ -0.64
GTF3A-209ENST00000640289 NRIP2Q9BQI9 281 aa11.03□□□□□ -0.64
GTF3A-209ENST00000640289 TCF7L1Q9HCS4 588 aa11.03□□□□□ -0.64
GTF3A-209ENST00000640289 NLKQ9UBE8 527 aa11.03□□□□□ -0.64
GTF3A-209ENST00000640289 A0A1B0GW55 424 aa11.02□□□□□ -0.65
GTF3A-209ENST00000640289 F5H0A9 414 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms