RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 NIPAL2Q9H841 368 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 RNF121Q9H920 327 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 BATF3Q9NR55 127 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 SLC17A5Q9NRA2 495 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 ELOVL5Q9NYP7 299 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 KCNN3Q9UGI6 736 aa6.88□□□□□ -1.31
SCARB2-220ENST00000640076 CADP27708 2225 aa6.87□□□□□ -1.31
SCARB2-220ENST00000640076 A0A0B4J293 547 aa6.87□□□□□ -1.31
SCARB2-220ENST00000640076 OR5H1A6NKK0 313 aa6.87□□□□□ -1.31
SCARB2-220ENST00000640076 OGG1O15527 345 aa6.87□□□□□ -1.31
SCARB2-220ENST00000640076 PLPP2O43688 288 aa6.87□□□□□ -1.31
SCARB2-220ENST00000640076 SRSF10O75494 262 aaKnown RBP6.87□□□□□ -1.31
SCARB2-220ENST00000640076 CD36P16671 472 aa6.87□□□□□ -1.31
SCARB2-220ENST00000640076 CRYGSP22914 178 aa6.87□□□□□ -1.31
SCARB2-220ENST00000640076 S100A1P23297 94 aa6.87□□□□□ -1.31
SCARB2-220ENST00000640076 GCSHP23434 173 aa6.87□□□□□ -1.31
SCARB2-220ENST00000640076 HSD11B1P28845 292 aa6.87□□□□□ -1.31
SCARB2-220ENST00000640076 HTR5AP47898 357 aa6.87□□□□□ -1.31
SCARB2-220ENST00000640076 P2RX3P56373 397 aa6.87□□□□□ -1.31
SCARB2-220ENST00000640076 UBE2NP61088 152 aaKnown RBP6.87□□□□□ -1.31
SCARB2-220ENST00000640076 MFGE8Q08431 387 aaPredicted RBP6.87□□□□□ -1.31
SCARB2-220ENST00000640076 FAM27E3Q08E93 113 aa6.87□□□□□ -1.31
SCARB2-220ENST00000640076 ECH1Q13011 328 aa6.87□□□□□ -1.31
SCARB2-220ENST00000640076 PDZK1IP1Q13113 114 aa6.87□□□□□ -1.31
SCARB2-220ENST00000640076 GPR50Q13585 617 aa6.87□□□□□ -1.31
SCARB2-220ENST00000640076 GSG1Q2KHT4 349 aa6.87□□□□□ -1.31
SCARB2-220ENST00000640076 SLC25A35Q3KQZ1 300 aa6.87□□□□□ -1.31
SCARB2-220ENST00000640076 KRTAP27-1Q3LI81 207 aa6.87□□□□□ -1.31
SCARB2-220ENST00000640076 RPL22L1Q6P5R6 122 aaKnown RBP6.87□□□□□ -1.31
SCARB2-220ENST00000640076 ARL9Q6T311 187 aa6.87□□□□□ -1.31
SCARB2-220ENST00000640076 MDP1Q86V88 176 aa6.87□□□□□ -1.31
SCARB2-220ENST00000640076 FAM219AQ8IW50 185 aa6.87□□□□□ -1.31
SCARB2-220ENST00000640076 CPEB3Q8NE35 698 aaKnown RBP6.87□□□□□ -1.31
SCARB2-220ENST00000640076 OR2G2Q8NGZ5 317 aa6.87□□□□□ -1.31
SCARB2-220ENST00000640076 MITD1Q8WV92 249 aa6.87□□□□□ -1.31
SCARB2-220ENST00000640076 CAPSLQ8WWF8 208 aa6.87□□□□□ -1.31
SCARB2-220ENST00000640076 SLC7A6Q92536 515 aa6.87□□□□□ -1.31
SCARB2-220ENST00000640076 SMIM19Q96E16 107 aa6.87□□□□□ -1.31
SCARB2-220ENST00000640076 FUNDC2Q9BWH2 189 aa6.87□□□□□ -1.31
SCARB2-220ENST00000640076 C1QTNF5Q9BXJ0 243 aa6.87□□□□□ -1.31
SCARB2-220ENST00000640076 MFFQ9GZY8 342 aa6.87□□□□□ -1.31
SCARB2-220ENST00000640076 ZNF275Q9NSD4 429 aaPredicted RBP6.87□□□□□ -1.31
SCARB2-220ENST00000640076 NDUFB11Q9NX14 153 aa6.87□□□□□ -1.31
SCARB2-220ENST00000640076 R4GMQ9 66 aa6.87□□□□□ -1.31
SCARB2-220ENST00000640076 USP9XQ93008 2570 aaPredicted RBP6.87□□□□□ -1.31
SCARB2-220ENST00000640076 C13orf42A0A1B0GVH6 325 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 TMEM269A0A1B0GVZ9 245 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 A0A1W2PR80 420 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 SSX5O60225 188 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 LCATP04180 440 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 RPA2P15927 270 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 CCKARP32238 428 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 PRKXP51817 358 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 GALK2Q01415 458 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 SLC3A1Q07837 685 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 BEX5Q5H9J7 111 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 WDR38Q5JTN6 314 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 GPR107Q5VW38 600 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 TEX38Q6PEX7 206 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 DOK3Q7L591 496 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 RTN4RL2Q86UN3 420 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 CATSPERDQ86XM0 798 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 ZNF584Q8IVC4 421 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 PRSS35Q8N3Z0 413 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 COMMD1Q8N668 190 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 ASB5Q8WWX0 329 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 SPTSSAQ969W0 71 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 S100PBPQ96BU1 408 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 DAZAP1Q96EP5 407 aaKnown RBP6.86□□□□□ -1.31
SCARB2-220ENST00000640076 PGLYRP3Q96LB9 341 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 C4orf45Q96LM5 186 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 ZNF75AQ96N20 296 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 DOK1Q99704 481 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 ASCL2Q99929 193 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 RBM38Q9H0Z9 239 aaKnown RBP6.86□□□□□ -1.31
SCARB2-220ENST00000640076 C12orf4Q9NQ89 552 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 FAM206AQ9NX38 181 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 MGAT4CQ9UBM8 478 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 ERRFI1Q9UJM3 462 aaPredicted RBP6.86□□□□□ -1.31
SCARB2-220ENST00000640076 SMIM31A0A1B0GVY4 71 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 OR4C45A6NMZ5 311 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 F5H5K5 113 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 LOC110117498-PIK3R3F6TDL0 507 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 C16orf97H3BN30 126 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 H3BSA7 217 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 M0R135 149 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 ZFPL1O95159 310 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 SERPINA5P05154 406 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 COX5BP10606 129 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 ZNF14P17017 642 aaPredicted RBP6.86□□□□□ -1.31
SCARB2-220ENST00000640076 GADD45AP24522 165 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 GABRA5P31644 462 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 UGT2B10P36537 528 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 KIR3DL2P43630 455 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 CX3CR1P49238 355 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 ASCL1P50553 236 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 ZNF121P58317 390 aaPredicted RBP6.86□□□□□ -1.31
SCARB2-220ENST00000640076 HGFACQ04756 655 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 PLP2Q04941 152 aa6.86□□□□□ -1.31
SCARB2-220ENST00000640076 FBXL19-AS1Q494R0 122 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms