RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 TEX101Q9BY14 249 aa17.47■□□□□ 0.39
CACNA1A-257ENST00000638009 ONECUT1Q9UBC0 465 aa17.47■□□□□ 0.39
CACNA1A-257ENST00000638009 OR2J2O76002 312 aa17.47■□□□□ 0.39
CACNA1A-257ENST00000638009 WFIKKN1Q96NZ8 548 aa17.47■□□□□ 0.39
CACNA1A-257ENST00000638009 HMSDA8MTL9 139 aa17.47■□□□□ 0.39
CACNA1A-257ENST00000638009 SLC38A11Q08AI6 406 aa17.47■□□□□ 0.39
CACNA1A-257ENST00000638009 PARM1Q6UWI2 310 aa17.47■□□□□ 0.39
CACNA1A-257ENST00000638009 CMC2Q9NRP2 79 aa17.47■□□□□ 0.39
CACNA1A-257ENST00000638009 RASL12Q9NYN1 266 aa17.47■□□□□ 0.39
CACNA1A-257ENST00000638009 AJAP1Q9UKB5 411 aaPredicted RBP17.47■□□□□ 0.39
CACNA1A-257ENST00000638009 CTNSO60931 367 aa17.47■□□□□ 0.39
CACNA1A-257ENST00000638009 CD70P32970 193 aa17.47■□□□□ 0.39
CACNA1A-257ENST00000638009 MAT1AQ00266 395 aaKnown RBP17.47■□□□□ 0.39
CACNA1A-257ENST00000638009 HLA-DRB5Q30154 266 aa17.47■□□□□ 0.39
CACNA1A-257ENST00000638009 PABPC1L2AQ5JQF8 200 aa17.47■□□□□ 0.39
CACNA1A-257ENST00000638009 PRSS45Q7RTY3 260 aa17.47■□□□□ 0.39
CACNA1A-257ENST00000638009 COL11A1P12107 1806 aaPredicted RBP17.47■□□□□ 0.39
CACNA1A-257ENST00000638009 K7EQS6 105 aa17.47■□□□□ 0.39
CACNA1A-257ENST00000638009 RNF39Q9H2S5 420 aa17.47■□□□□ 0.39
CACNA1A-257ENST00000638009 TECRQ9NZ01 308 aaKnown RBP17.47■□□□□ 0.39
CACNA1A-257ENST00000638009 RAXQ9Y2V3 346 aa17.47■□□□□ 0.39
CACNA1A-257ENST00000638009 KLF13Q9Y2Y9 288 aaPredicted RBP17.47■□□□□ 0.39
CACNA1A-257ENST00000638009 GABRA6Q16445 453 aa17.47■□□□□ 0.39
CACNA1A-257ENST00000638009 SPSB1Q96BD6 273 aa17.47■□□□□ 0.39
CACNA1A-257ENST00000638009 TMEM38BQ9NVV0 291 aa17.47■□□□□ 0.39
CACNA1A-257ENST00000638009 H3BNC9 293 aa17.46■□□□□ 0.39
CACNA1A-257ENST00000638009 SIRPB1O00241 398 aa17.46■□□□□ 0.39
CACNA1A-257ENST00000638009 GPNMBQ14956 572 aa17.46■□□□□ 0.39
CACNA1A-257ENST00000638009 NHSL2Q5HYW2 709 aa17.46■□□□□ 0.39
CACNA1A-257ENST00000638009 UBALD2Q8IYN6 164 aa17.46■□□□□ 0.39
CACNA1A-257ENST00000638009 ARIH2OSQ8N7S6 290 aa17.46■□□□□ 0.39
CACNA1A-257ENST00000638009 OR5C1Q8NGR4 320 aa17.46■□□□□ 0.39
CACNA1A-257ENST00000638009 FITM1A5D6W6 292 aa17.46■□□□□ 0.39
CACNA1A-257ENST00000638009 APCSP02743 223 aa17.46■□□□□ 0.39
CACNA1A-257ENST00000638009 PMCHL1Q16048 86 aa17.46■□□□□ 0.39
CACNA1A-257ENST00000638009 SNX22Q96L94 193 aa17.46■□□□□ 0.39
CACNA1A-257ENST00000638009 PAM16Q9Y3D7 125 aa17.46■□□□□ 0.39
CACNA1A-257ENST00000638009 TANC2Q9HCD6 1990 aa17.46■□□□□ 0.39
CACNA1A-257ENST00000638009 OPRM1P35372 400 aa17.46■□□□□ 0.39
CACNA1A-257ENST00000638009 C18orf21Q32NC0 220 aaPredicted RBP17.46■□□□□ 0.39
CACNA1A-257ENST00000638009 PELI3Q8N2H9 469 aa17.46■□□□□ 0.39
CACNA1A-257ENST00000638009 SYT8Q8NBV8 401 aa17.46■□□□□ 0.39
CACNA1A-257ENST00000638009 OR8A1Q8NGG7 326 aa17.46■□□□□ 0.39
CACNA1A-257ENST00000638009 UBTD2Q8WUN7 234 aa17.46■□□□□ 0.39
CACNA1A-257ENST00000638009 ISL2Q96A47 359 aa17.46■□□□□ 0.39
CACNA1A-257ENST00000638009 OPN1LWP04000 364 aa17.46■□□□□ 0.39
CACNA1A-257ENST00000638009 OR5M1Q8NGP8 315 aa17.46■□□□□ 0.39
CACNA1A-257ENST00000638009 CACNG5Q9UF02 275 aa17.46■□□□□ 0.39
CACNA1A-257ENST00000638009 FBLL1A6NHQ2 334 aaKnown RBP17.46■□□□□ 0.39
CACNA1A-257ENST00000638009 ADAMTSL4Q6UY14 1074 aa17.46■□□□□ 0.39
CACNA1A-257ENST00000638009 CTRCQ99895 268 aa17.46■□□□□ 0.39
CACNA1A-257ENST00000638009 MYOZ1Q9NP98 299 aaPredicted RBP17.46■□□□□ 0.39
CACNA1A-257ENST00000638009 ATAD5Q96QE3 1844 aa17.46■□□□□ 0.39
CACNA1A-257ENST00000638009 TMEM267Q0VDI3 215 aaPredicted RBP17.46■□□□□ 0.39
CACNA1A-257ENST00000638009 SAP30LQ9HAJ7 183 aa17.46■□□□□ 0.39
CACNA1A-257ENST00000638009 FOXA1P55317 472 aa17.46■□□□□ 0.38
CACNA1A-257ENST00000638009 SNRNP40Q96DI7 357 aaKnown RBP17.46■□□□□ 0.38
CACNA1A-257ENST00000638009 PMP22Q01453 160 aa17.45■□□□□ 0.38
CACNA1A-257ENST00000638009 RAB32Q13637 225 aa17.45■□□□□ 0.38
CACNA1A-257ENST00000638009 LIPNQ5VXI9 398 aa17.45■□□□□ 0.38
CACNA1A-257ENST00000638009 ZNF383Q8NA42 475 aa17.45■□□□□ 0.38
CACNA1A-257ENST00000638009 PMCHL2Q9BQD1 86 aa17.45■□□□□ 0.38
CACNA1A-257ENST00000638009 PSMG3Q9BT73 122 aaPredicted RBP17.45■□□□□ 0.38
CACNA1A-257ENST00000638009 KDM3BQ7LBC6 1761 aa17.45■□□□□ 0.38
CACNA1A-257ENST00000638009 RBFOX3A6NFN3 312 aa17.45■□□□□ 0.38
CACNA1A-257ENST00000638009 MASP2O00187 686 aa17.45■□□□□ 0.38
CACNA1A-257ENST00000638009 MNX1P50219 401 aaPredicted RBP17.45■□□□□ 0.38
CACNA1A-257ENST00000638009 JMJD6Q6NYC1 403 aaPredicted RBP17.45■□□□□ 0.38
CACNA1A-257ENST00000638009 MARCH1Q8TCQ1 289 aa17.45■□□□□ 0.38
CACNA1A-257ENST00000638009 SARAFQ96BY9 339 aa17.45■□□□□ 0.38
CACNA1A-257ENST00000638009 IL23AQ9NPF7 189 aa17.45■□□□□ 0.38
CACNA1A-257ENST00000638009 PLXNA1Q9UIW2 1896 aa17.45■□□□□ 0.38
CACNA1A-257ENST00000638009 MICBQ29980 383 aa17.45■□□□□ 0.38
CACNA1A-257ENST00000638009 LILRA2Q8N149 483 aa17.45■□□□□ 0.38
CACNA1A-257ENST00000638009 FBXO27Q8NI29 283 aa17.45■□□□□ 0.38
CACNA1A-257ENST00000638009 TBX15Q96SF7 602 aa17.45■□□□□ 0.38
CACNA1A-257ENST00000638009 CA10Q9NS85 328 aa17.45■□□□□ 0.38
CACNA1A-257ENST00000638009 IFITM10A6NMD0 228 aa17.45■□□□□ 0.38
CACNA1A-257ENST00000638009 DHRS3O75911 302 aa17.45■□□□□ 0.38
CACNA1A-257ENST00000638009 ZNF253O75346 499 aa17.45■□□□□ 0.38
CACNA1A-257ENST00000638009 ID1P41134 155 aa17.45■□□□□ 0.38
CACNA1A-257ENST00000638009 SIGIRRQ6IA17 410 aa17.45■□□□□ 0.38
CACNA1A-257ENST00000638009 NUDT16L1Q9BRJ7 211 aaKnown RBP17.45■□□□□ 0.38
CACNA1A-257ENST00000638009 SAXO2Q658L1 398 aa17.45■□□□□ 0.38
CACNA1A-257ENST00000638009 TMEM25Q86YD3 366 aa17.45■□□□□ 0.38
CACNA1A-257ENST00000638009 ZIC5Q96T25 663 aa17.45■□□□□ 0.38
CACNA1A-257ENST00000638009 NUFIP2Q7Z417 695 aaKnown RBP17.44■□□□□ 0.38
CACNA1A-257ENST00000638009 OXGR1Q96P68 337 aa17.44■□□□□ 0.38
CACNA1A-257ENST00000638009 NPTNQ9Y639 398 aa17.44■□□□□ 0.38
CACNA1A-257ENST00000638009 SNRPEP62304 92 aaKnown RBP17.44■□□□□ 0.38
CACNA1A-257ENST00000638009 ZXDAP98168 799 aa17.44■□□□□ 0.38
CACNA1A-257ENST00000638009 GABRG3Q99928 467 aa17.44■□□□□ 0.38
CACNA1A-257ENST00000638009 GLIPR2Q9H4G4 154 aa17.44■□□□□ 0.38
CACNA1A-257ENST00000638009 GREB1Q4ZG55 1949 aa17.44■□□□□ 0.38
CACNA1A-257ENST00000638009 ACAA1P09110 424 aaPredicted RBP17.44■□□□□ 0.38
CACNA1A-257ENST00000638009 OR1B1Q8NGR6 318 aa17.44■□□□□ 0.38
CACNA1A-257ENST00000638009 SMAD2Q15796 467 aaKnown RBP17.44■□□□□ 0.38
CACNA1A-257ENST00000638009 TCTN1Q2MV58 587 aa17.44■□□□□ 0.38
CACNA1A-257ENST00000638009 TMEM136Q6ZRR5 245 aa17.44■□□□□ 0.38
CACNA1A-257ENST00000638009 COA3Q9Y2R0 106 aaPredicted RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms