RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 WIPF1O43516 503 aa6.54□□□□□ -1.36
PNKP-229ENST00000637897 PTBP3O95758 552 aaKnown RBP6.54□□□□□ -1.36
PNKP-229ENST00000637897 UCHL1P09936 223 aa6.54□□□□□ -1.36
PNKP-229ENST00000637897 PPIAL4FP0DN26 164 aa6.54□□□□□ -1.36
PNKP-229ENST00000637897 IGHV4-38-2P0DP08 117 aa6.54□□□□□ -1.36
PNKP-229ENST00000637897 TUBG1P23258 451 aa6.54□□□□□ -1.36
PNKP-229ENST00000637897 MAPK3P27361 379 aaPredicted RBP6.54□□□□□ -1.36
PNKP-229ENST00000637897 CFPP27918 469 aa6.54□□□□□ -1.36
PNKP-229ENST00000637897 GATA4P43694 442 aa6.54□□□□□ -1.36
PNKP-229ENST00000637897 COMPP49747 757 aaPredicted RBP6.54□□□□□ -1.36
PNKP-229ENST00000637897 ROM1Q03395 351 aa6.54□□□□□ -1.36
PNKP-229ENST00000637897 ZNF154Q13106 437 aa6.54□□□□□ -1.36
PNKP-229ENST00000637897 ALKBH1Q13686 389 aaKnown RBP6.54□□□□□ -1.36
PNKP-229ENST00000637897 OXA1LQ15070 435 aa6.54□□□□□ -1.36
PNKP-229ENST00000637897 ZMAT1Q5H9K5 638 aa6.54□□□□□ -1.36
PNKP-229ENST00000637897 TEX30Q5JUR7 227 aa6.54□□□□□ -1.36
PNKP-229ENST00000637897 GLYATL3Q5SZD4 288 aa6.54□□□□□ -1.36
PNKP-229ENST00000637897 DCAF12L2Q5VW00 463 aa6.54□□□□□ -1.36
PNKP-229ENST00000637897 FDX2Q6P4F2 183 aa6.54□□□□□ -1.36
PNKP-229ENST00000637897 UNQ9370/PRO34162Q6UXP9 181 aa6.54□□□□□ -1.36
PNKP-229ENST00000637897 DPY19L4Q7Z388 723 aa6.54□□□□□ -1.36
PNKP-229ENST00000637897 PEG10Q86TG7 708 aaKnown RBP6.54□□□□□ -1.36
PNKP-229ENST00000637897 WDR86Q86TI4 376 aa6.54□□□□□ -1.36
PNKP-229ENST00000637897 MOGAT3Q86VF5 341 aa6.54□□□□□ -1.36
PNKP-229ENST00000637897 LYSMD2Q8IV50 215 aa6.54□□□□□ -1.36
PNKP-229ENST00000637897 LAX1Q8IWV1 398 aa6.54□□□□□ -1.36
PNKP-229ENST00000637897 C11orf53Q8IXP5 236 aa6.54□□□□□ -1.36
PNKP-229ENST00000637897 FGFRL1Q8N441 504 aa6.54□□□□□ -1.36
PNKP-229ENST00000637897 GDPD1Q8N9F7 314 aa6.54□□□□□ -1.36
PNKP-229ENST00000637897 BHLHE23Q8NDY6 225 aa6.54□□□□□ -1.36
PNKP-229ENST00000637897 OR4M2Q8NGB6 313 aa6.54□□□□□ -1.36
PNKP-229ENST00000637897 OR2AE1Q8NHA4 323 aa6.54□□□□□ -1.36
PNKP-229ENST00000637897 THEM6Q8WUY1 208 aa6.54□□□□□ -1.36
PNKP-229ENST00000637897 PPP1R14BQ96C90 147 aa6.54□□□□□ -1.36
PNKP-229ENST00000637897 RAB39BQ96DA2 213 aa6.54□□□□□ -1.36
PNKP-229ENST00000637897 ATF6BQ99941 703 aa6.54□□□□□ -1.36
PNKP-229ENST00000637897 TMEM246Q9BRR3 403 aa6.54□□□□□ -1.36
PNKP-229ENST00000637897 TTTY10Q9BZA0 68 aa6.54□□□□□ -1.36
PNKP-229ENST00000637897 EGLN1Q9GZT9 426 aa6.54□□□□□ -1.36
PNKP-229ENST00000637897 FGF23Q9GZV9 251 aaPredicted RBP6.54□□□□□ -1.36
PNKP-229ENST00000637897 COMMD4Q9H0A8 199 aa6.54□□□□□ -1.36
PNKP-229ENST00000637897 HDHD2Q9H0R4 259 aa6.54□□□□□ -1.36
PNKP-229ENST00000637897 C7orf69Q9H7B7 122 aa6.54□□□□□ -1.36
PNKP-229ENST00000637897 SP140LQ9H930 580 aa6.54□□□□□ -1.36
PNKP-229ENST00000637897 ABCB9Q9NP78 766 aa6.54□□□□□ -1.36
PNKP-229ENST00000637897 TUBG2Q9NRH3 451 aa6.54□□□□□ -1.36
PNKP-229ENST00000637897 ABCB10Q9NRK6 738 aa6.54□□□□□ -1.36
PNKP-229ENST00000637897 CTSZQ9UBR2 303 aa6.54□□□□□ -1.36
PNKP-229ENST00000637897 MRM2Q9UI43 246 aaKnown RBP6.54□□□□□ -1.36
PNKP-229ENST00000637897 IKZF2Q9UKS7 526 aa6.54□□□□□ -1.36
PNKP-229ENST00000637897 PPP1R3CQ9UQK1 317 aa6.54□□□□□ -1.36
PNKP-229ENST00000637897 KLHDC2Q9Y2U9 406 aa6.54□□□□□ -1.36
PNKP-229ENST00000637897 A0A0A6YYJ9 748 aa6.53□□□□□ -1.36
PNKP-229ENST00000637897 A0A1B0GW55 424 aa6.53□□□□□ -1.36
PNKP-229ENST00000637897 FABP12A6NFH5 140 aa6.53□□□□□ -1.36
PNKP-229ENST00000637897 C22orf46C9J442 243 aa6.53□□□□□ -1.36
PNKP-229ENST00000637897 J3QLI3 93 aa6.53□□□□□ -1.36
PNKP-229ENST00000637897 MAGEB4O15481 346 aaPredicted RBP6.53□□□□□ -1.36
PNKP-229ENST00000637897 ZNF254O75437 659 aa6.53□□□□□ -1.36
PNKP-229ENST00000637897 PTTG1O95997 202 aa6.53□□□□□ -1.36
PNKP-229ENST00000637897 APOA1P02647 267 aa6.53□□□□□ -1.36
PNKP-229ENST00000637897 SPARCP09486 303 aa6.53□□□□□ -1.36
PNKP-229ENST00000637897 DUX4L2P0CJ85 424 aa6.53□□□□□ -1.36
PNKP-229ENST00000637897 DUX4L3P0CJ86 424 aa6.53□□□□□ -1.36
PNKP-229ENST00000637897 DUX4L4P0CJ87 422 aa6.53□□□□□ -1.36
PNKP-229ENST00000637897 DUX4L5P0CJ88 424 aa6.53□□□□□ -1.36
PNKP-229ENST00000637897 DUX4L6P0CJ89 424 aa6.53□□□□□ -1.36
PNKP-229ENST00000637897 DUX4L7P0CJ90 424 aa6.53□□□□□ -1.36
PNKP-229ENST00000637897 SLC2A1P11166 492 aa6.53□□□□□ -1.36
PNKP-229ENST00000637897 ZNF823P16415 610 aa6.53□□□□□ -1.36
PNKP-229ENST00000637897 EGR1P18146 543 aa6.53□□□□□ -1.36
PNKP-229ENST00000637897 AMY2BP19961 511 aa6.53□□□□□ -1.36
PNKP-229ENST00000637897 RAB3BP20337 219 aa6.53□□□□□ -1.36
PNKP-229ENST00000637897 PSMB10P40306 273 aa6.53□□□□□ -1.36
PNKP-229ENST00000637897 CD200P41217 278 aa6.53□□□□□ -1.36
PNKP-229ENST00000637897 GUCA1AP43080 201 aaPredicted RBP6.53□□□□□ -1.36
PNKP-229ENST00000637897 CCR9P51686 369 aa6.53□□□□□ -1.36
PNKP-229ENST00000637897 RPS11P62280 158 aaKnown RBP eCLIP6.53□□□□□ -1.36
PNKP-229ENST00000637897 IFITM3Q01628 133 aa6.53□□□□□ -1.36
PNKP-229ENST00000637897 INSL4Q14641 139 aa6.53□□□□□ -1.36
PNKP-229ENST00000637897 HSD17B12Q53GQ0 312 aa6.53□□□□□ -1.36
PNKP-229ENST00000637897 LIPNQ5VXI9 398 aa6.53□□□□□ -1.36
PNKP-229ENST00000637897 STEAP3Q658P3 488 aa6.53□□□□□ -1.36
PNKP-229ENST00000637897 DEGS2Q6QHC5 323 aa6.53□□□□□ -1.36
PNKP-229ENST00000637897 DUX4L9Q6RFH8 374 aaPredicted RBP6.53□□□□□ -1.36
PNKP-229ENST00000637897 FAM131AQ6UXB0 335 aa6.53□□□□□ -1.36
PNKP-229ENST00000637897 KRT77Q7Z794 578 aa6.53□□□□□ -1.36
PNKP-229ENST00000637897 ZNF679Q8IYX0 411 aa6.53□□□□□ -1.36
PNKP-229ENST00000637897 OR13G1Q8NGZ3 307 aa6.53□□□□□ -1.36
PNKP-229ENST00000637897 OR5AK2Q8NH90 309 aa6.53□□□□□ -1.36
PNKP-229ENST00000637897 SETD6Q8TBK2 473 aa6.53□□□□□ -1.36
PNKP-229ENST00000637897 Q8TCH9 128 aa6.53□□□□□ -1.36
PNKP-229ENST00000637897 FAM216AQ8WUB2 273 aa6.53□□□□□ -1.36
PNKP-229ENST00000637897 TIMD4Q96H15 378 aa6.53□□□□□ -1.36
PNKP-229ENST00000637897 DIRAS2Q96HU8 199 aa6.53□□□□□ -1.36
PNKP-229ENST00000637897 OR8B4Q96RC9 309 aa6.53□□□□□ -1.36
PNKP-229ENST00000637897 PDCD1LG2Q9BQ51 273 aa6.53□□□□□ -1.36
PNKP-229ENST00000637897 SLITRK2Q9H156 845 aa6.53□□□□□ -1.36
PNKP-229ENST00000637897 MIXL1Q9H2W2 232 aa6.53□□□□□ -1.36
PNKP-229ENST00000637897 COMMD3Q9UBI1 195 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms