RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 PLA2G2EQ9NZK7 142 aa12.72□□□□□ -0.37
CLN6-215ENST00000636674 C19orf25Q9UFG5 118 aaPredicted RBP12.72□□□□□ -0.37
CLN6-215ENST00000636674 SCRG1O75711 98 aa12.71□□□□□ -0.37
CLN6-215ENST00000636674 IFNA21P01568 189 aa12.71□□□□□ -0.37
CLN6-215ENST00000636674 SERPINA5P05154 406 aa12.71□□□□□ -0.37
CLN6-215ENST00000636674 HOXB1P14653 301 aaPredicted RBP12.71□□□□□ -0.37
CLN6-215ENST00000636674 FCGR2CP31995 323 aa12.71□□□□□ -0.37
CLN6-215ENST00000636674 GUCA1AP43080 201 aaPredicted RBP12.71□□□□□ -0.37
CLN6-215ENST00000636674 RSPO1Q2MKA7 263 aaPredicted RBP12.71□□□□□ -0.37
CLN6-215ENST00000636674 DTX1Q86Y01 620 aa12.71□□□□□ -0.37
CLN6-215ENST00000636674 COMMD1Q8N668 190 aa12.71□□□□□ -0.37
CLN6-215ENST00000636674 NPRL2Q8WTW4 380 aa12.71□□□□□ -0.37
CLN6-215ENST00000636674 ANXA10Q9UJ72 324 aa12.71□□□□□ -0.37
CLN6-215ENST00000636674 HSF4Q9ULV5 492 aa12.71□□□□□ -0.37
CLN6-215ENST00000636674 TIMM10BQ9Y5J6 103 aa12.71□□□□□ -0.37
CLN6-215ENST00000636674 KPTNQ9Y664 436 aa12.71□□□□□ -0.37
CLN6-215ENST00000636674 CHCHD2Q9Y6H1 151 aaPredicted RBP12.71□□□□□ -0.37
CLN6-215ENST00000636674 COLCA2A8K830 154 aa12.71□□□□□ -0.38
CLN6-215ENST00000636674 MSTNO14793 375 aa12.71□□□□□ -0.38
CLN6-215ENST00000636674 PNLIPP16233 465 aa12.71□□□□□ -0.38
CLN6-215ENST00000636674 DTYMKP23919 212 aa12.71□□□□□ -0.38
CLN6-215ENST00000636674 NFYBP25208 207 aa12.71□□□□□ -0.38
CLN6-215ENST00000636674 RPL35P42766 123 aaKnown RBP12.71□□□□□ -0.38
CLN6-215ENST00000636674 AFF3P51826 1226 aaKnown RBP12.71□□□□□ -0.38
CLN6-215ENST00000636674 UCP2P55851 309 aa12.71□□□□□ -0.38
CLN6-215ENST00000636674 S100A12P80511 92 aa12.71□□□□□ -0.38
CLN6-215ENST00000636674 PEA15Q15121 130 aa12.71□□□□□ -0.38
CLN6-215ENST00000636674 GGNBP1Q5YKI7 109 aa12.71□□□□□ -0.38
CLN6-215ENST00000636674 RPUSD3Q6P087 351 aaKnown RBP12.71□□□□□ -0.38
CLN6-215ENST00000636674 DHRS11Q6UWP2 260 aa12.71□□□□□ -0.38
CLN6-215ENST00000636674 PLXDC2Q6UX71 529 aa12.71□□□□□ -0.38
CLN6-215ENST00000636674 Q6ZRG5 221 aa12.71□□□□□ -0.38
CLN6-215ENST00000636674 C6orf201Q7Z4U5 140 aa12.71□□□□□ -0.38
CLN6-215ENST00000636674 C15orf54Q8N8G6 183 aa12.71□□□□□ -0.38
CLN6-215ENST00000636674 SPSB1Q96BD6 273 aa12.71□□□□□ -0.38
CLN6-215ENST00000636674 GALNT14Q96FL9 552 aa12.71□□□□□ -0.38
CLN6-215ENST00000636674 KIRREL1Q96J84 757 aa12.71□□□□□ -0.38
CLN6-215ENST00000636674 OR6C1Q96RD1 312 aa12.71□□□□□ -0.38
CLN6-215ENST00000636674 SMCO4Q9NRQ5 59 aa12.71□□□□□ -0.38
CLN6-215ENST00000636674 PIGLQ9Y2B2 252 aa12.71□□□□□ -0.38
CLN6-215ENST00000636674 ABCA7Q8IZY2 2146 aa12.7□□□□□ -0.38
CLN6-215ENST00000636674 MYO7BQ6PIF6 2116 aa12.7□□□□□ -0.38
CLN6-215ENST00000636674 F5H5K5 113 aa12.7□□□□□ -0.38
CLN6-215ENST00000636674 M0R135 149 aa12.7□□□□□ -0.38
CLN6-215ENST00000636674 VAMP5O95183 116 aa12.7□□□□□ -0.38
CLN6-215ENST00000636674 PDGFBP01127 241 aaPredicted RBP12.7□□□□□ -0.38
CLN6-215ENST00000636674 CD63P08962 238 aa12.7□□□□□ -0.38
CLN6-215ENST00000636674 AKR1D1P51857 326 aa12.7□□□□□ -0.38
CLN6-215ENST00000636674 SUCLG1P53597 346 aaKnown RBP12.7□□□□□ -0.38
CLN6-215ENST00000636674 TMEM33P57088 247 aa12.7□□□□□ -0.38
CLN6-215ENST00000636674 PHYHD1Q5SRE7 291 aa12.7□□□□□ -0.38
CLN6-215ENST00000636674 FAM219AQ8IW50 185 aa12.7□□□□□ -0.38
CLN6-215ENST00000636674 TMEM123Q8N131 208 aa12.7□□□□□ -0.38
CLN6-215ENST00000636674 LRTM2Q8N967 370 aa12.7□□□□□ -0.38
CLN6-215ENST00000636674 CPNE2Q96FN4 548 aaPredicted RBP12.7□□□□□ -0.38
CLN6-215ENST00000636674 ZNF799Q96GE5 643 aa12.7□□□□□ -0.38
CLN6-215ENST00000636674 C12orf57Q99622 126 aa12.7□□□□□ -0.38
CLN6-215ENST00000636674 SULT4A1Q9BR01 284 aa12.7□□□□□ -0.38
CLN6-215ENST00000636674 PIGQQ9BRB3 760 aa12.7□□□□□ -0.38
CLN6-215ENST00000636674 CRB3Q9BUF7 120 aa12.7□□□□□ -0.38
CLN6-215ENST00000636674 PLEKHJ1Q9NW61 149 aa12.7□□□□□ -0.38
CLN6-215ENST00000636674 CACFD1Q9UGQ2 172 aa12.7□□□□□ -0.38
CLN6-215ENST00000636674 PADI1Q9ULC6 663 aa12.7□□□□□ -0.38
CLN6-215ENST00000636674 CA14Q9ULX7 337 aa12.7□□□□□ -0.38
CLN6-215ENST00000636674 STARD10Q9Y365 291 aa12.7□□□□□ -0.38
CLN6-215ENST00000636674 KIAA1549Q9HCM3 1950 aa12.7□□□□□ -0.38
CLN6-215ENST00000636674 OR5H15A6NDH6 313 aa12.69□□□□□ -0.38
CLN6-215ENST00000636674 PCP4L1A6NKN8 68 aa12.69□□□□□ -0.38
CLN6-215ENST00000636674 TP53I11O14683 189 aa12.69□□□□□ -0.38
CLN6-215ENST00000636674 EIF1BO60739 113 aaKnown RBP12.69□□□□□ -0.38
CLN6-215ENST00000636674 CD80P33681 288 aa12.69□□□□□ -0.38
CLN6-215ENST00000636674 FAM76BQ5HYJ3 339 aa12.69□□□□□ -0.38
CLN6-215ENST00000636674 OR9K2Q8NGE7 335 aa12.69□□□□□ -0.38
CLN6-215ENST00000636674 PIGTQ969N2 578 aa12.69□□□□□ -0.38
CLN6-215ENST00000636674 MRPL24Q96A35 216 aaKnown RBP12.69□□□□□ -0.38
CLN6-215ENST00000636674 DEFB126Q9BYW3 111 aa12.69□□□□□ -0.38
CLN6-215ENST00000636674 RARRES3Q9UL19 164 aa12.69□□□□□ -0.38
CLN6-215ENST00000636674 C9JQL5 133 aa12.69□□□□□ -0.38
CLN6-215ENST00000636674 E5RGE8 158 aa12.69□□□□□ -0.38
CLN6-215ENST00000636674 BCAT2O15382 392 aaPredicted RBP12.69□□□□□ -0.38
CLN6-215ENST00000636674 DHHO43323 396 aa12.69□□□□□ -0.38
CLN6-215ENST00000636674 SEC11BP0C7V7 166 aa12.69□□□□□ -0.38
CLN6-215ENST00000636674 B2MP61769 119 aa12.69□□□□□ -0.38
CLN6-215ENST00000636674 FOXRED2Q8IWF2 684 aa12.69□□□□□ -0.38
CLN6-215ENST00000636674 SFT2D1Q8WV19 159 aa12.69□□□□□ -0.38
CLN6-215ENST00000636674 SPTSSAQ969W0 71 aa12.69□□□□□ -0.38
CLN6-215ENST00000636674 INTS12Q96CB8 462 aaKnown RBP12.69□□□□□ -0.38
CLN6-215ENST00000636674 FAM212BQ9NTI7 297 aaPredicted RBP12.69□□□□□ -0.38
CLN6-215ENST00000636674 FOXD3Q9UJU5 478 aaPredicted RBP12.69□□□□□ -0.38
CLN6-215ENST00000636674 SSUH2Q9Y2M2 353 aa12.69□□□□□ -0.38
CLN6-215ENST00000636674 NSG2Q9Y328 171 aa12.69□□□□□ -0.38
CLN6-215ENST00000636674 OR8U9P0C7N5 309 aa12.68□□□□□ -0.38
CLN6-215ENST00000636674 OR5H8P0DN80 308 aa12.68□□□□□ -0.38
CLN6-215ENST00000636674 GABRR1P24046 479 aa12.68□□□□□ -0.38
CLN6-215ENST00000636674 TMEM187Q14656 261 aa12.68□□□□□ -0.38
CLN6-215ENST00000636674 SHBQ15464 509 aa12.68□□□□□ -0.38
CLN6-215ENST00000636674 SWI5Q1ZZU3 235 aa12.68□□□□□ -0.38
CLN6-215ENST00000636674 DMRTC1Q5HYR2 192 aa12.68□□□□□ -0.38
CLN6-215ENST00000636674 ASCL4Q6XD76 172 aa12.68□□□□□ -0.38
CLN6-215ENST00000636674 GALNTL5Q7Z4T8 443 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms