RNA–Protein interactions for RNA: ENST00000636652.1

CHRNA4-216, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 195 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-216ENST00000636652 UBBP0CG47 229 aa11.29□□□□□ -0.6
CHRNA4-216ENST00000636652 TMEM225BP0DP42 221 aa11.29□□□□□ -0.6
CHRNA4-216ENST00000636652 CFHR2P36980 270 aa11.29□□□□□ -0.6
CHRNA4-216ENST00000636652 HNRNPA0Q13151 305 aaKnown RBP11.29□□□□□ -0.6
CHRNA4-216ENST00000636652 AWAT2Q6E213 333 aa11.29□□□□□ -0.6
CHRNA4-216ENST00000636652 WDR82Q6UXN9 313 aa11.29□□□□□ -0.6
CHRNA4-216ENST00000636652 ASCL4Q6XD76 172 aa11.29□□□□□ -0.6
CHRNA4-216ENST00000636652 SLC25A26Q70HW3 274 aa11.29□□□□□ -0.6
CHRNA4-216ENST00000636652 OR4D6Q8NGJ1 314 aa11.29□□□□□ -0.6
CHRNA4-216ENST00000636652 TBC1D15Q8TC07 691 aa11.29□□□□□ -0.6
CHRNA4-216ENST00000636652 NKX3-1Q99801 234 aaPredicted RBP11.29□□□□□ -0.6
CHRNA4-216ENST00000636652 GHRLQ9UBU3 117 aa11.29□□□□□ -0.6
CHRNA4-216ENST00000636652 MRPS28Q9Y2Q9 187 aaKnown RBP11.29□□□□□ -0.6
CHRNA4-216ENST00000636652 DCHS2Q6V1P9 2916 aa11.29□□□□□ -0.6
CHRNA4-216ENST00000636652 PTPN13Q12923 2485 aa11.28□□□□□ -0.6
CHRNA4-216ENST00000636652 FBN2P35556 2912 aa11.28□□□□□ -0.6
CHRNA4-216ENST00000636652 hCG_1807616A0A1W2PRN6 198 aa11.28□□□□□ -0.6
CHRNA4-216ENST00000636652 LRRC30A6NM36 301 aa11.28□□□□□ -0.6
CHRNA4-216ENST00000636652 SPRY1O43609 319 aaPredicted RBP11.28□□□□□ -0.6
CHRNA4-216ENST00000636652 SYNGR1O43759 233 aa11.28□□□□□ -0.6
CHRNA4-216ENST00000636652 ANGPTL7O43827 346 aa11.28□□□□□ -0.6
CHRNA4-216ENST00000636652 NOS1APO75052 506 aaPredicted RBP11.28□□□□□ -0.6
CHRNA4-216ENST00000636652 PGA5P0DJD9 388 aa11.28□□□□□ -0.6
CHRNA4-216ENST00000636652 IRF2P14316 349 aa11.28□□□□□ -0.6
CHRNA4-216ENST00000636652 PMELP40967 661 aa11.28□□□□□ -0.6
CHRNA4-216ENST00000636652 RORCP51449 518 aa11.28□□□□□ -0.6
CHRNA4-216ENST00000636652 CAPZA1P52907 286 aa11.28□□□□□ -0.6
CHRNA4-216ENST00000636652 CAV3P56539 151 aa11.28□□□□□ -0.6
CHRNA4-216ENST00000636652 HES5Q5TA89 166 aa11.28□□□□□ -0.6
CHRNA4-216ENST00000636652 ZNF826PQ6ZT77 177 aa11.28□□□□□ -0.6
CHRNA4-216ENST00000636652 Q8IYB0 196 aa11.28□□□□□ -0.6
CHRNA4-216ENST00000636652 POC1AQ8NBT0 407 aa11.28□□□□□ -0.6
CHRNA4-216ENST00000636652 OR51F2Q8NH61 342 aa11.28□□□□□ -0.6
CHRNA4-216ENST00000636652 DYNC2LI1Q8TCX1 351 aa11.28□□□□□ -0.6
CHRNA4-216ENST00000636652 RDH5Q92781 318 aa11.28□□□□□ -0.6
CHRNA4-216ENST00000636652 SLC25A28Q96A46 364 aa11.28□□□□□ -0.6
CHRNA4-216ENST00000636652 S100A13Q99584 98 aa11.28□□□□□ -0.6
CHRNA4-216ENST00000636652 MRI1Q9BV20 369 aa11.28□□□□□ -0.6
CHRNA4-216ENST00000636652 RHOFQ9HBH0 211 aa11.28□□□□□ -0.6
CHRNA4-216ENST00000636652 BARX1Q9HBU1 254 aaPredicted RBP11.28□□□□□ -0.6
CHRNA4-216ENST00000636652 SMURF1Q9HCE7 757 aa11.28□□□□□ -0.6
CHRNA4-216ENST00000636652 DLL4Q9NR61 685 aa11.28□□□□□ -0.6
CHRNA4-216ENST00000636652 BEX4Q9NWD9 120 aaPredicted RBP11.28□□□□□ -0.6
CHRNA4-216ENST00000636652 IL36GQ9NZH8 169 aa11.28□□□□□ -0.6
CHRNA4-216ENST00000636652 CCDC59Q9P031 241 aaKnown RBP11.28□□□□□ -0.6
CHRNA4-216ENST00000636652 RNF7Q9UBF6 113 aa11.28□□□□□ -0.6
CHRNA4-216ENST00000636652 STEAP1Q9UHE8 339 aa11.28□□□□□ -0.6
CHRNA4-216ENST00000636652 DAPK2Q9UIK4 370 aa11.28□□□□□ -0.6
CHRNA4-216ENST00000636652 PLEKHA6Q9Y2H5 1048 aa11.28□□□□□ -0.6
CHRNA4-216ENST00000636652 IGKV1-12A0A0C4DH73 117 aa11.27□□□□□ -0.61
CHRNA4-216ENST00000636652 TRAPPC2LH3BP13 241 aa11.27□□□□□ -0.61
CHRNA4-216ENST00000636652 CDC14BO60729 498 aa11.27□□□□□ -0.61
CHRNA4-216ENST00000636652 ZNF780AO75290 641 aaPredicted RBP11.27□□□□□ -0.61
CHRNA4-216ENST00000636652 RHBDL1O75783 438 aa11.27□□□□□ -0.61
CHRNA4-216ENST00000636652 KDM4BO94953 1096 aa11.27□□□□□ -0.61
CHRNA4-216ENST00000636652 BPNT1O95861 308 aa11.27□□□□□ -0.61
CHRNA4-216ENST00000636652 IGKV1D-12P01611 117 aa11.27□□□□□ -0.61
CHRNA4-216ENST00000636652 DAOP14920 347 aa11.27□□□□□ -0.61
CHRNA4-216ENST00000636652 DNASE1P24855 282 aa11.27□□□□□ -0.61
CHRNA4-216ENST00000636652 SOX6P35712 828 aa11.27□□□□□ -0.61
CHRNA4-216ENST00000636652 SCAND1P57086 179 aa11.27□□□□□ -0.61
CHRNA4-216ENST00000636652 GPR176Q14439 515 aa11.27□□□□□ -0.61
CHRNA4-216ENST00000636652 P2RY14Q15391 338 aa11.27□□□□□ -0.61
CHRNA4-216ENST00000636652 DGUOKQ16854 277 aa11.27□□□□□ -0.61
CHRNA4-216ENST00000636652 HFEQ30201 348 aa11.27□□□□□ -0.61
CHRNA4-216ENST00000636652 GLIPR1L1Q6UWM5 242 aa11.27□□□□□ -0.61
CHRNA4-216ENST00000636652 C1orf87Q8N0U7 546 aa11.27□□□□□ -0.61
CHRNA4-216ENST00000636652 LRRC29Q8WV35 223 aa11.27□□□□□ -0.61
CHRNA4-216ENST00000636652 AP3S1Q92572 193 aa11.27□□□□□ -0.61
CHRNA4-216ENST00000636652 NINJ1Q92982 152 aa11.27□□□□□ -0.61
CHRNA4-216ENST00000636652 SLAMF9Q96A28 289 aa11.27□□□□□ -0.61
CHRNA4-216ENST00000636652 KCTD12Q96CX2 325 aaKnown RBP11.27□□□□□ -0.61
CHRNA4-216ENST00000636652 CEP19Q96LK0 163 aa11.27□□□□□ -0.61
CHRNA4-216ENST00000636652 LURAP1Q96LR2 239 aa11.27□□□□□ -0.61
CHRNA4-216ENST00000636652 C1orf147Q96MC9 270 aaPredicted RBP11.27□□□□□ -0.61
CHRNA4-216ENST00000636652 NRIP2Q9BQI9 281 aa11.27□□□□□ -0.61
CHRNA4-216ENST00000636652 BARHL1Q9BZE3 327 aa11.27□□□□□ -0.61
CHRNA4-216ENST00000636652 GSX2Q9BZM3 304 aa11.27□□□□□ -0.61
CHRNA4-216ENST00000636652 METTL9Q9H1A3 318 aa11.27□□□□□ -0.61
CHRNA4-216ENST00000636652 MYOZ1Q9NP98 299 aaPredicted RBP11.27□□□□□ -0.61
CHRNA4-216ENST00000636652 PCDHB16Q9NRJ7 776 aa11.27□□□□□ -0.61
CHRNA4-216ENST00000636652 TMEM106BQ9NUM4 274 aa11.27□□□□□ -0.61
CHRNA4-216ENST00000636652 MTCH1Q9NZJ7 389 aa11.27□□□□□ -0.61
CHRNA4-216ENST00000636652 ING4Q9UNL4 249 aa11.27□□□□□ -0.61
CHRNA4-216ENST00000636652 SRRM5B3KS81 715 aa11.26□□□□□ -0.61
CHRNA4-216ENST00000636652 NDUFS7O75251 213 aa11.26□□□□□ -0.61
CHRNA4-216ENST00000636652 RP2O75695 350 aa11.26□□□□□ -0.61
CHRNA4-216ENST00000636652 LHBP01229 141 aa11.26□□□□□ -0.61
CHRNA4-216ENST00000636652 IGHV4-39P01824 125 aa11.26□□□□□ -0.61
CHRNA4-216ENST00000636652 CALCBP10092 127 aa11.26□□□□□ -0.61
CHRNA4-216ENST00000636652 SLC2A2P11168 524 aaPredicted RBP11.26□□□□□ -0.61
CHRNA4-216ENST00000636652 ARSBP15848 533 aa11.26□□□□□ -0.61
CHRNA4-216ENST00000636652 ZNF182P17025 639 aaPredicted RBP11.26□□□□□ -0.61
CHRNA4-216ENST00000636652 PTH2RP49190 550 aa11.26□□□□□ -0.61
CHRNA4-216ENST00000636652 BMXP51813 675 aa11.26□□□□□ -0.61
CHRNA4-216ENST00000636652 CLDN12P56749 244 aa11.26□□□□□ -0.61
CHRNA4-216ENST00000636652 ERVK11-1P61568 191 aa11.26□□□□□ -0.61
CHRNA4-216ENST00000636652 DYNC1I2Q13409 638 aaKnown RBP11.26□□□□□ -0.61
CHRNA4-216ENST00000636652 RSU1Q15404 277 aa11.26□□□□□ -0.61
CHRNA4-216ENST00000636652 IDNKQ5T6J7 187 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms