RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 TMEM186Q96B77 213 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 SMIM19Q96E16 107 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 SEH1LQ96EE3 360 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 NEIL1Q96FI4 390 aaPredicted RBP8.12□□□□□ -1.11
LINC00339-210ENST00000635675 WDR13Q9H1Z4 485 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 HIF1ANQ9NWT6 349 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 KCNS2Q9ULS6 477 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 SLC7A11Q9UPY5 501 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 ERGIC3Q9Y282 383 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 POLR3KQ9Y2Y1 108 aaPredicted RBP8.12□□□□□ -1.11
LINC00339-210ENST00000635675 DOCK11Q5JSL3 2073 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 IGHV3OR15-7A0A075B7D8 119 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 PPIAL4CA0A0B4J2A2 164 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 PNMA8CA0A1B0GUJ8 204 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 FAM230AA0A1W2PPH8 454 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 KIAA1324LA8MWY0 1029 aaPredicted RBP8.12□□□□□ -1.11
LINC00339-210ENST00000635675 A8MXK9 166 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 J3QT63 122 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 SYNGR1O43759 233 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 NOS1APO75052 506 aaPredicted RBP8.12□□□□□ -1.11
LINC00339-210ENST00000635675 CRLF1O75462 422 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 FOXH1O75593 365 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 ACAA1P09110 424 aaPredicted RBP8.12□□□□□ -1.11
LINC00339-210ENST00000635675 RPS2P15880 293 aaKnown RBP8.12□□□□□ -1.11
LINC00339-210ENST00000635675 ZNF20P17024 532 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 HOXB4P17483 251 aaPredicted RBP8.12□□□□□ -1.11
LINC00339-210ENST00000635675 ATF1P18846 271 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 PCMT1P22061 227 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 RPL5P46777 297 aaKnown RBP8.12□□□□□ -1.11
LINC00339-210ENST00000635675 ALDH3B2P48448 385 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 LCN2P80188 198 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 CNN3Q15417 329 aaKnown RBP8.12□□□□□ -1.11
LINC00339-210ENST00000635675 MICBQ29980 383 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 NLRC3Q7RTR2 1065 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 ANGPTL5Q86XS5 388 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 CALHM1Q8IU99 346 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 SERPINA12Q8IW75 414 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 DNAAF1Q8NEP3 725 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 TRMT10AQ8TBZ6 339 aaKnown RBP8.12□□□□□ -1.11
LINC00339-210ENST00000635675 GPR148Q8TDV2 347 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 NPRL2Q8WTW4 380 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 MUL1Q969V5 352 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 C12orf43Q96C57 262 aaKnown RBP8.12□□□□□ -1.11
LINC00339-210ENST00000635675 PGLYRP3Q96LB9 341 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 ACOT13Q9NPJ3 140 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 KAAG1Q9UBP8 84 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 CTSZQ9UBR2 303 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 DHDHQ9UQ10 334 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 ZNF281Q9Y2X9 895 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 LSM2Q9Y333 95 aaKnown RBP8.12□□□□□ -1.11
LINC00339-210ENST00000635675 WNK2Q9Y3S1 2297 aa8.11□□□□□ -1.11
LINC00339-210ENST00000635675 TRIM64CA6NLI5 447 aa8.11□□□□□ -1.11
LINC00339-210ENST00000635675 TRAPPC2LH3BP13 241 aa8.11□□□□□ -1.11
LINC00339-210ENST00000635675 PHF1O43189 567 aaPredicted RBP8.11□□□□□ -1.11
LINC00339-210ENST00000635675 ALX3O95076 343 aa8.11□□□□□ -1.11
LINC00339-210ENST00000635675 GYPAP02724 150 aa8.11□□□□□ -1.11
LINC00339-210ENST00000635675 CD1AP06126 327 aa8.11□□□□□ -1.11
LINC00339-210ENST00000635675 PGA5P0DJD9 388 aa8.11□□□□□ -1.11
LINC00339-210ENST00000635675 AMY2BP19961 511 aa8.11□□□□□ -1.11
LINC00339-210ENST00000635675 PRKACBP22694 351 aa8.11□□□□□ -1.11
LINC00339-210ENST00000635675 AZGP1P25311 298 aaKnown RBP8.11□□□□□ -1.11
LINC00339-210ENST00000635675 PITPNBP48739 271 aa8.11□□□□□ -1.11
LINC00339-210ENST00000635675 GP2P55259 537 aaKnown RBP8.11□□□□□ -1.11
LINC00339-210ENST00000635675 TAS2R43P59537 309 aa8.11□□□□□ -1.11
LINC00339-210ENST00000635675 RPS11P62280 158 aaKnown RBP eCLIP8.11□□□□□ -1.11
LINC00339-210ENST00000635675 BDH1Q02338 343 aa8.11□□□□□ -1.11
LINC00339-210ENST00000635675 PAX2Q02962 417 aa8.11□□□□□ -1.11
LINC00339-210ENST00000635675 ACSM1Q08AH1 577 aa8.11□□□□□ -1.11
LINC00339-210ENST00000635675 IL24Q13007 206 aa8.11□□□□□ -1.11
LINC00339-210ENST00000635675 CR1LQ2VPA4 569 aa8.11□□□□□ -1.11
LINC00339-210ENST00000635675 ESCO2Q56NI9 601 aa8.11□□□□□ -1.11
LINC00339-210ENST00000635675 FAM120AOSQ5T036 256 aa8.11□□□□□ -1.11
LINC00339-210ENST00000635675 ATPAF1Q5TC12 328 aaPredicted RBP8.11□□□□□ -1.11
LINC00339-210ENST00000635675 GPR107Q5VW38 600 aa8.11□□□□□ -1.11
LINC00339-210ENST00000635675 WDR25Q64LD2 544 aaPredicted RBP8.11□□□□□ -1.11
LINC00339-210ENST00000635675 STUMQ69YW2 141 aa8.11□□□□□ -1.11
LINC00339-210ENST00000635675 ASPHD2Q6ICH7 369 aa8.11□□□□□ -1.11
LINC00339-210ENST00000635675 ZNF529Q6P280 563 aa8.11□□□□□ -1.11
LINC00339-210ENST00000635675 CLVS1Q8IUQ0 354 aaPredicted RBP8.11□□□□□ -1.11
LINC00339-210ENST00000635675 ZFP41Q8N8Y5 198 aa8.11□□□□□ -1.11
LINC00339-210ENST00000635675 POC1AQ8NBT0 407 aa8.11□□□□□ -1.11
LINC00339-210ENST00000635675 OR5T2Q8NGG2 359 aa8.11□□□□□ -1.11
LINC00339-210ENST00000635675 OR8B3Q8NGG8 313 aa8.11□□□□□ -1.11
LINC00339-210ENST00000635675 OR5D14Q8NGL3 314 aa8.11□□□□□ -1.11
LINC00339-210ENST00000635675 OR13C9Q8NGT0 318 aa8.11□□□□□ -1.11
LINC00339-210ENST00000635675 TSEN15Q8WW01 171 aaKnown RBP8.11□□□□□ -1.11
LINC00339-210ENST00000635675 SPSB1Q96BD6 273 aa8.11□□□□□ -1.11
LINC00339-210ENST00000635675 BORCS8Q96FH0 119 aa8.11□□□□□ -1.11
LINC00339-210ENST00000635675 OR5M11Q96RB7 305 aa8.11□□□□□ -1.11
LINC00339-210ENST00000635675 OR8B2Q96RD0 313 aa8.11□□□□□ -1.11
LINC00339-210ENST00000635675 NRIP2Q9BQI9 281 aa8.11□□□□□ -1.11
LINC00339-210ENST00000635675 MND1Q9BWT6 205 aa8.11□□□□□ -1.11
LINC00339-210ENST00000635675 SSBP3Q9BWW4 388 aaPredicted RBP8.11□□□□□ -1.11
LINC00339-210ENST00000635675 PKIBQ9C010 78 aa8.11□□□□□ -1.11
LINC00339-210ENST00000635675 ZCCHC4Q9H5U6 513 aa8.11□□□□□ -1.11
LINC00339-210ENST00000635675 MMP26Q9NRE1 261 aa8.11□□□□□ -1.11
LINC00339-210ENST00000635675 RASL12Q9NYN1 266 aa8.11□□□□□ -1.11
LINC00339-210ENST00000635675 POLDIP2Q9Y2S7 368 aa8.11□□□□□ -1.11
LINC00339-210ENST00000635675 C2CD3Q4AC94 2353 aa8.1□□□□□ -1.11
LINC00339-210ENST00000635675 A0A0G2JMP0 313 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms