RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 VCXQ9H320 206 aa13.01□□□□□ -0.33
LINC00339-207ENST00000634712 CNTD2Q9H8S5 307 aa13.01□□□□□ -0.33
LINC00339-207ENST00000634712 MRPS18AQ9NVS2 196 aaKnown RBP13.01□□□□□ -0.33
LINC00339-207ENST00000634712 ERVK13-1Q9NX77 482 aa13.01□□□□□ -0.33
LINC00339-207ENST00000634712 ZNF69Q9UC07 566 aa13.01□□□□□ -0.33
LINC00339-207ENST00000634712 TRAV40A0A0B4J280 105 aa13□□□□□ -0.33
LINC00339-207ENST00000634712 A0A1B0GW55 424 aa13□□□□□ -0.33
LINC00339-207ENST00000634712 IRGMA1A4Y4 181 aa13□□□□□ -0.33
LINC00339-207ENST00000634712 SYNGR1O43759 233 aa13□□□□□ -0.33
LINC00339-207ENST00000634712 NXPH2O95156 264 aa13□□□□□ -0.33
LINC00339-207ENST00000634712 CLIC3O95833 236 aa13□□□□□ -0.33
LINC00339-207ENST00000634712 IGHA1P01876 353 aa13□□□□□ -0.33
LINC00339-207ENST00000634712 ISG15P05161 165 aa13□□□□□ -0.33
LINC00339-207ENST00000634712 RPSAP08865 295 aaKnown RBP13□□□□□ -0.33
LINC00339-207ENST00000634712 ACAA1P09110 424 aaPredicted RBP13□□□□□ -0.33
LINC00339-207ENST00000634712 DUX4L2P0CJ85 424 aa13□□□□□ -0.33
LINC00339-207ENST00000634712 DUX4L3P0CJ86 424 aa13□□□□□ -0.33
LINC00339-207ENST00000634712 DUX4L4P0CJ87 422 aa13□□□□□ -0.33
LINC00339-207ENST00000634712 DUX4L5P0CJ88 424 aa13□□□□□ -0.33
LINC00339-207ENST00000634712 DUX4L6P0CJ89 424 aa13□□□□□ -0.33
LINC00339-207ENST00000634712 DUX4L7P0CJ90 424 aa13□□□□□ -0.33
LINC00339-207ENST00000634712 GBX2P52951 348 aaPredicted RBP13□□□□□ -0.33
LINC00339-207ENST00000634712 HILS1P60008 231 aa13□□□□□ -0.33
LINC00339-207ENST00000634712 NANOS3P60323 173 aaKnown RBP13□□□□□ -0.33
LINC00339-207ENST00000634712 ARF6P62330 175 aa13□□□□□ -0.33
LINC00339-207ENST00000634712 GABPB1Q06547 395 aaPredicted RBP13□□□□□ -0.33
LINC00339-207ENST00000634712 CNN3Q15417 329 aaKnown RBP13□□□□□ -0.33
LINC00339-207ENST00000634712 UBE2V2Q15819 145 aa13□□□□□ -0.33
LINC00339-207ENST00000634712 SMIM21Q3B7S5 101 aa13□□□□□ -0.33
LINC00339-207ENST00000634712 GPR157Q5UAW9 335 aa13□□□□□ -0.33
LINC00339-207ENST00000634712 DUX4L9Q6RFH8 374 aaPredicted RBP13□□□□□ -0.33
LINC00339-207ENST00000634712 ZNF788Q6ZQV5 615 aa13□□□□□ -0.33
LINC00339-207ENST00000634712 ANGPTL5Q86XS5 388 aa13□□□□□ -0.33
LINC00339-207ENST00000634712 POC1AQ8NBT0 407 aa13□□□□□ -0.33
LINC00339-207ENST00000634712 FGGYQ96C11 551 aa13□□□□□ -0.33
LINC00339-207ENST00000634712 BORCS8Q96FH0 119 aa13□□□□□ -0.33
LINC00339-207ENST00000634712 CHST5Q9GZS9 411 aa13□□□□□ -0.33
LINC00339-207ENST00000634712 DCLRE1BQ9H816 532 aa13□□□□□ -0.33
LINC00339-207ENST00000634712 DUX4Q9UBX2 424 aa13□□□□□ -0.33
LINC00339-207ENST00000634712 SLC25A10Q9UBX3 287 aaPredicted RBP13□□□□□ -0.33
LINC00339-207ENST00000634712 RPUSD1Q9UJJ7 312 aaKnown RBP13□□□□□ -0.33
LINC00339-207ENST00000634712 HHLA2Q9UM44 414 aa13□□□□□ -0.33
LINC00339-207ENST00000634712 SIGLEC5O15389 551 aa12.99□□□□□ -0.33
LINC00339-207ENST00000634712 WBP4O75554 376 aaKnown RBP12.99□□□□□ -0.33
LINC00339-207ENST00000634712 PGA5P0DJD9 388 aa12.99□□□□□ -0.33
LINC00339-207ENST00000634712 IGHV4-38-2P0DP08 117 aa12.99□□□□□ -0.33
LINC00339-207ENST00000634712 PSG2P11465 335 aa12.99□□□□□ -0.33
LINC00339-207ENST00000634712 NDUFB7P17568 137 aa12.99□□□□□ -0.33
LINC00339-207ENST00000634712 AMY2BP19961 511 aa12.99□□□□□ -0.33
LINC00339-207ENST00000634712 CAPZA1P52907 286 aa12.99□□□□□ -0.33
LINC00339-207ENST00000634712 SMN1Q16637 294 aaKnown RBP12.99□□□□□ -0.33
LINC00339-207ENST00000634712 ACP7Q6ZNF0 438 aa12.99□□□□□ -0.33
LINC00339-207ENST00000634712 CMTM4Q8IZR5 234 aa12.99□□□□□ -0.33
LINC00339-207ENST00000634712 OR13C3Q8NGS6 347 aa12.99□□□□□ -0.33
LINC00339-207ENST00000634712 CNIH3Q8TBE1 160 aa12.99□□□□□ -0.33
LINC00339-207ENST00000634712 HAVCR2Q8TDQ0 301 aa12.99□□□□□ -0.33
LINC00339-207ENST00000634712 ZFAND2BQ8WV99 257 aa12.99□□□□□ -0.33
LINC00339-207ENST00000634712 RNF166Q96A37 237 aaPredicted RBP12.99□□□□□ -0.33
LINC00339-207ENST00000634712 ZNF488Q96MN9 340 aa12.99□□□□□ -0.33
LINC00339-207ENST00000634712 WDFY2Q96P53 400 aa12.99□□□□□ -0.33
LINC00339-207ENST00000634712 GAFA1Q96PS6 74 aa12.99□□□□□ -0.33
LINC00339-207ENST00000634712 PKIBQ9C010 78 aa12.99□□□□□ -0.33
LINC00339-207ENST00000634712 COMMD4Q9H0A8 199 aa12.99□□□□□ -0.33
LINC00339-207ENST00000634712 ISG20L2Q9H9L3 353 aaKnown RBP12.99□□□□□ -0.33
LINC00339-207ENST00000634712 ONECUT1Q9UBC0 465 aa12.99□□□□□ -0.33
LINC00339-207ENST00000634712 RFPL4AA6NLU0 287 aa12.98□□□□□ -0.33
LINC00339-207ENST00000634712 RFPL4AL1F8VTS6 287 aa12.98□□□□□ -0.33
LINC00339-207ENST00000634712 NOS1APO75052 506 aaPredicted RBP12.98□□□□□ -0.33
LINC00339-207ENST00000634712 TFF1P04155 84 aa12.98□□□□□ -0.33
LINC00339-207ENST00000634712 CCDC159P0C7I6 412 aa12.98□□□□□ -0.33
LINC00339-207ENST00000634712 DCKP27707 260 aa12.98□□□□□ -0.33
LINC00339-207ENST00000634712 ATP1B3P54709 279 aa12.98□□□□□ -0.33
LINC00339-207ENST00000634712 BPIFB3P59826 476 aa12.98□□□□□ -0.33
LINC00339-207ENST00000634712 IL24Q13007 206 aa12.98□□□□□ -0.33
LINC00339-207ENST00000634712 IL18R1Q13478 541 aa12.98□□□□□ -0.33
LINC00339-207ENST00000634712 MED21Q13503 144 aa12.98□□□□□ -0.33
LINC00339-207ENST00000634712 PDCD1Q15116 288 aa12.98□□□□□ -0.33
LINC00339-207ENST00000634712 OGFRL1Q5TC84 451 aaPredicted RBP12.98□□□□□ -0.33
LINC00339-207ENST00000634712 TMPRSS11AQ6ZMR5 421 aa12.98□□□□□ -0.33
LINC00339-207ENST00000634712 BCL6BQ8N143 479 aaPredicted RBP12.98□□□□□ -0.33
LINC00339-207ENST00000634712 FGFRL1Q8N441 504 aa12.98□□□□□ -0.33
LINC00339-207ENST00000634712 SIGLECL1Q8N7X8 197 aa12.98□□□□□ -0.33
LINC00339-207ENST00000634712 TMEM185AQ8NFB2 350 aa12.98□□□□□ -0.33
LINC00339-207ENST00000634712 NEK6Q9HC98 313 aa12.98□□□□□ -0.33
LINC00339-207ENST00000634712 FGF20Q9NP95 211 aaPredicted RBP12.98□□□□□ -0.33
LINC00339-207ENST00000634712 CHCHD3Q9NX63 227 aaKnown RBP12.98□□□□□ -0.33
LINC00339-207ENST00000634712 IGKV1D-17A0A075B6S4 117 aa12.97□□□□□ -0.33
LINC00339-207ENST00000634712 OR4C45A6NMZ5 311 aa12.97□□□□□ -0.33
LINC00339-207ENST00000634712 SLC1A7O00341 560 aa12.97□□□□□ -0.33
LINC00339-207ENST00000634712 CASQ2O14958 399 aaPredicted RBP12.97□□□□□ -0.33
LINC00339-207ENST00000634712 FCN3O75636 299 aa12.97□□□□□ -0.33
LINC00339-207ENST00000634712 CYB5AP00167 134 aa12.97□□□□□ -0.33
LINC00339-207ENST00000634712 PLATP00750 562 aa12.97□□□□□ -0.33
LINC00339-207ENST00000634712 SFTPBP07988 381 aa12.97□□□□□ -0.33
LINC00339-207ENST00000634712 SELLP14151 372 aa12.97□□□□□ -0.33
LINC00339-207ENST00000634712 MYL12AP19105 171 aa12.97□□□□□ -0.33
LINC00339-207ENST00000634712 PRKACBP22694 351 aa12.97□□□□□ -0.33
LINC00339-207ENST00000634712 MPZP25189 248 aa12.97□□□□□ -0.33
LINC00339-207ENST00000634712 CAPGP40121 348 aa12.97□□□□□ -0.33
LINC00339-207ENST00000634712 RBP2P50120 134 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms