RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 ATP1B1P05026 303 aa4.09□□□□□ -1.75
SDCBP-213ENST00000630925 METTL15P1P0C7V9 234 aa4.09□□□□□ -1.75
SDCBP-213ENST00000630925 SPI1P17947 270 aa4.09□□□□□ -1.75
SDCBP-213ENST00000630925 PSMB1P20618 241 aaKnown RBP4.09□□□□□ -1.75
SDCBP-213ENST00000630925 CDKN2BP42772 138 aa4.09□□□□□ -1.75
SDCBP-213ENST00000630925 PTH2RP49190 550 aa4.09□□□□□ -1.75
SDCBP-213ENST00000630925 ZNF133P52736 654 aaPredicted RBP4.09□□□□□ -1.75
SDCBP-213ENST00000630925 ARG2P78540 354 aa4.09□□□□□ -1.75
SDCBP-213ENST00000630925 CDK5Q00535 292 aa4.09□□□□□ -1.75
SDCBP-213ENST00000630925 IFITM2Q01629 132 aa4.09□□□□□ -1.75
SDCBP-213ENST00000630925 GINS1Q14691 196 aa4.09□□□□□ -1.75
SDCBP-213ENST00000630925 SLC25A35Q3KQZ1 300 aa4.09□□□□□ -1.75
SDCBP-213ENST00000630925 RNF212Q495C1 297 aa4.09□□□□□ -1.75
SDCBP-213ENST00000630925 STAC2Q6ZMT1 411 aa4.09□□□□□ -1.75
SDCBP-213ENST00000630925 ZDHHC13Q8IUH4 622 aa4.09□□□□□ -1.75
SDCBP-213ENST00000630925 ZNF614Q8N883 585 aa4.09□□□□□ -1.75
SDCBP-213ENST00000630925 OR8G5Q8NG78 346 aa4.09□□□□□ -1.75
SDCBP-213ENST00000630925 RPLP0P6Q8NHW5 317 aa4.09□□□□□ -1.75
SDCBP-213ENST00000630925 RCN3Q96D15 328 aa4.09□□□□□ -1.75
SDCBP-213ENST00000630925 MRAP2Q96G30 205 aa4.09□□□□□ -1.75
SDCBP-213ENST00000630925 BTF3L4Q96K17 158 aa4.09□□□□□ -1.75
SDCBP-213ENST00000630925 LPAR4Q99677 370 aa4.09□□□□□ -1.75
SDCBP-213ENST00000630925 FAM96AQ9H5X1 160 aa4.09□□□□□ -1.75
SDCBP-213ENST00000630925 PRORYQ9H606 182 aa4.09□□□□□ -1.75
SDCBP-213ENST00000630925 CLMPQ9H6B4 373 aa4.09□□□□□ -1.75
SDCBP-213ENST00000630925 HMG20AQ9NP66 347 aa4.09□□□□□ -1.75
SDCBP-213ENST00000630925 SNX10Q9Y5X0 201 aa4.09□□□□□ -1.75
SDCBP-213ENST00000630925 R4GN57 208 aa4.09□□□□□ -1.75
SDCBP-213ENST00000630925 ZNF646O15015 1829 aaPredicted RBP4.09□□□□□ -1.75
SDCBP-213ENST00000630925 ARID2Q68CP9 1835 aa4.09□□□□□ -1.76
SDCBP-213ENST00000630925 NAV1Q8NEY1 1877 aa4.09□□□□□ -1.76
SDCBP-213ENST00000630925 A0A1W2PPI3 338 aa4.09□□□□□ -1.76
SDCBP-213ENST00000630925 ISPDA4D126 451 aa4.09□□□□□ -1.76
SDCBP-213ENST00000630925 OR5H14A6NHG9 310 aa4.09□□□□□ -1.76
SDCBP-213ENST00000630925 C15orf61A6NNL5 157 aa4.09□□□□□ -1.76
SDCBP-213ENST00000630925 TRAPPC2LH3BP13 241 aa4.09□□□□□ -1.76
SDCBP-213ENST00000630925 KIR2DS3K7RE56 304 aa4.09□□□□□ -1.76
SDCBP-213ENST00000630925 SLC17A3O00476 420 aa4.09□□□□□ -1.76
SDCBP-213ENST00000630925 CCL21O00585 134 aa4.09□□□□□ -1.76
SDCBP-213ENST00000630925 SOX15O60248 233 aa4.09□□□□□ -1.76
SDCBP-213ENST00000630925 B4GALT3O60512 393 aa4.09□□□□□ -1.76
SDCBP-213ENST00000630925 MFAP3LO75121 409 aa4.09□□□□□ -1.76
SDCBP-213ENST00000630925 OR7C1O76099 320 aaPredicted RBP4.09□□□□□ -1.76
SDCBP-213ENST00000630925 ARG1P05089 322 aa4.09□□□□□ -1.76
SDCBP-213ENST00000630925 FAM157CP0CG43 387 aa4.09□□□□□ -1.76
SDCBP-213ENST00000630925 PAX1P15863 534 aa4.09□□□□□ -1.76
SDCBP-213ENST00000630925 ITGB7P26010 798 aa4.09□□□□□ -1.76
SDCBP-213ENST00000630925 WNT4P56705 351 aa4.09□□□□□ -1.76
SDCBP-213ENST00000630925 RHOBP62745 196 aa4.09□□□□□ -1.76
SDCBP-213ENST00000630925 KIR2DS3Q14952 304 aa4.09□□□□□ -1.76
SDCBP-213ENST00000630925 OXA1LQ15070 435 aa4.09□□□□□ -1.76
SDCBP-213ENST00000630925 DCAF10Q5QP82 559 aa4.09□□□□□ -1.76
SDCBP-213ENST00000630925 FNDC7Q5VTL7 733 aa4.09□□□□□ -1.76
SDCBP-213ENST00000630925 TRIM40Q6P9F5 258 aa4.09□□□□□ -1.76
SDCBP-213ENST00000630925 SCIMPQ6UWF3 145 aa4.09□□□□□ -1.76
SDCBP-213ENST00000630925 FAM231DQ6ZW35 169 aa4.09□□□□□ -1.76
SDCBP-213ENST00000630925 DOLPP1Q86YN1 238 aa4.09□□□□□ -1.76
SDCBP-213ENST00000630925 IFT20Q8IY31 132 aa4.09□□□□□ -1.76
SDCBP-213ENST00000630925 BPIFB2Q8N4F0 458 aa4.09□□□□□ -1.76
SDCBP-213ENST00000630925 ACOT12Q8WYK0 555 aa4.09□□□□□ -1.76
SDCBP-213ENST00000630925 TADA1Q96BN2 335 aa4.09□□□□□ -1.76
SDCBP-213ENST00000630925 FGGYQ96C11 551 aa4.09□□□□□ -1.76
SDCBP-213ENST00000630925 SMARCD1Q96GM5 515 aa4.09□□□□□ -1.76
SDCBP-213ENST00000630925 OR8B4Q96RC9 309 aa4.09□□□□□ -1.76
SDCBP-213ENST00000630925 KXD1Q9BQD3 176 aa4.09□□□□□ -1.76
SDCBP-213ENST00000630925 C1orf50Q9BV19 199 aa4.09□□□□□ -1.76
SDCBP-213ENST00000630925 MLST8Q9BVC4 326 aa4.09□□□□□ -1.76
SDCBP-213ENST00000630925 FNDC4Q9H6D8 234 aaPredicted RBP4.09□□□□□ -1.76
SDCBP-213ENST00000630925 C7orf69Q9H7B7 122 aa4.09□□□□□ -1.76
SDCBP-213ENST00000630925 ENY2Q9NPA8 101 aa4.09□□□□□ -1.76
SDCBP-213ENST00000630925 OPTCQ9UBM4 332 aa4.09□□□□□ -1.76
SDCBP-213ENST00000630925 L3MBTL1Q9Y468 752 aa4.09□□□□□ -1.76
SDCBP-213ENST00000630925 USP34Q70CQ2 3546 aa4.08□□□□□ -1.76
SDCBP-213ENST00000630925 TCRBV5S1A1TA0A578 114 aa4.08□□□□□ -1.76
SDCBP-213ENST00000630925 MEIOCA2RUB1 952 aa4.08□□□□□ -1.76
SDCBP-213ENST00000630925 F5H5K5 113 aa4.08□□□□□ -1.76
SDCBP-213ENST00000630925 PRRG2O14669 202 aa4.08□□□□□ -1.76
SDCBP-213ENST00000630925 OIP5O43482 229 aa4.08□□□□□ -1.76
SDCBP-213ENST00000630925 RGS14O43566 566 aa4.08□□□□□ -1.76
SDCBP-213ENST00000630925 MFSD11O43934 449 aa4.08□□□□□ -1.76
SDCBP-213ENST00000630925 GALR3O60755 368 aaPredicted RBP4.08□□□□□ -1.76
SDCBP-213ENST00000630925 UGT2B11O75310 529 aa4.08□□□□□ -1.76
SDCBP-213ENST00000630925 ATG12O94817 140 aa4.08□□□□□ -1.76
SDCBP-213ENST00000630925 PTTG1O95997 202 aa4.08□□□□□ -1.76
SDCBP-213ENST00000630925 SEMG1P04279 462 aa4.08□□□□□ -1.76
SDCBP-213ENST00000630925 RPL35AP18077 110 aaKnown RBP4.08□□□□□ -1.76
SDCBP-213ENST00000630925 RPS20P60866 119 aaKnown RBP4.08□□□□□ -1.76
SDCBP-213ENST00000630925 RRAS2P62070 204 aaPredicted RBP4.08□□□□□ -1.76
SDCBP-213ENST00000630925 RPL8P62917 257 aaKnown RBP4.08□□□□□ -1.76
SDCBP-213ENST00000630925 GAGE5Q13069 117 aa4.08□□□□□ -1.76
SDCBP-213ENST00000630925 GAGE6Q13070 117 aa4.08□□□□□ -1.76
SDCBP-213ENST00000630925 RIGQ13278 110 aa4.08□□□□□ -1.76
SDCBP-213ENST00000630925 CTF1Q16619 201 aa4.08□□□□□ -1.76
SDCBP-213ENST00000630925 PAPPA-AS1Q5QFB9 102 aa4.08□□□□□ -1.76
SDCBP-213ENST00000630925 DNLZQ5SXM8 178 aa4.08□□□□□ -1.76
SDCBP-213ENST00000630925 FHL5Q5TD97 284 aa4.08□□□□□ -1.76
SDCBP-213ENST00000630925 C1orf195Q5TG92 126 aa4.08□□□□□ -1.76
SDCBP-213ENST00000630925 HECTD2Q5U5R9 776 aa4.08□□□□□ -1.76
SDCBP-213ENST00000630925 HAGHLQ6PII5 290 aaPredicted RBP4.08□□□□□ -1.76
SDCBP-213ENST00000630925 COMMD7Q86VX2 200 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms