RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 OPALINQ96PE5 141 aa16.97■□□□□ 0.31
PTCD3-220ENST00000627371 IGHV3OR15-7A0A075B7D8 119 aa16.96■□□□□ 0.31
PTCD3-220ENST00000627371 NDUFA2O43678 99 aa16.96■□□□□ 0.31
PTCD3-220ENST00000627371 SULT1B1O43704 296 aa16.96■□□□□ 0.31
PTCD3-220ENST00000627371 SYNGR1O43759 233 aa16.96■□□□□ 0.31
PTCD3-220ENST00000627371 MRPS14O60783 128 aaKnown RBP16.96■□□□□ 0.31
PTCD3-220ENST00000627371 MSMBP08118 114 aa16.96■□□□□ 0.31
PTCD3-220ENST00000627371 WNT2P09544 360 aa16.96■□□□□ 0.31
PTCD3-220ENST00000627371 OCMP0CE72 109 aaPredicted RBP16.96■□□□□ 0.31
PTCD3-220ENST00000627371 RBP2P50120 134 aa16.96■□□□□ 0.31
PTCD3-220ENST00000627371 ATP1B3P54709 279 aa16.96■□□□□ 0.31
PTCD3-220ENST00000627371 IL24Q13007 206 aa16.96■□□□□ 0.31
PTCD3-220ENST00000627371 Q499Y3 187 aa16.96■□□□□ 0.31
PTCD3-220ENST00000627371 LHFPL2Q6ZUX7 228 aa16.96■□□□□ 0.31
PTCD3-220ENST00000627371 ANGPTL5Q86XS5 388 aa16.96■□□□□ 0.31
PTCD3-220ENST00000627371 POC1AQ8NBT0 407 aa16.96■□□□□ 0.31
PTCD3-220ENST00000627371 OR51F2Q8NH61 342 aa16.96■□□□□ 0.31
PTCD3-220ENST00000627371 NEIL1Q96FI4 390 aaPredicted RBP16.96■□□□□ 0.31
PTCD3-220ENST00000627371 WDR13Q9H1Z4 485 aa16.96■□□□□ 0.31
PTCD3-220ENST00000627371 NEK6Q9HC98 313 aa16.96■□□□□ 0.31
PTCD3-220ENST00000627371 YAE1D1Q9NRH1 226 aa16.96■□□□□ 0.31
PTCD3-220ENST00000627371 LRCH1Q9Y2L9 728 aa16.96■□□□□ 0.31
PTCD3-220ENST00000627371 A8MV72 311 aaPredicted RBP16.95■□□□□ 0.3
PTCD3-220ENST00000627371 TNFRSF13BO14836 293 aaPredicted RBP16.95■□□□□ 0.3
PTCD3-220ENST00000627371 NOS1APO75052 506 aaPredicted RBP16.95■□□□□ 0.3
PTCD3-220ENST00000627371 GYPAP02724 150 aa16.95■□□□□ 0.3
PTCD3-220ENST00000627371 PGA5P0DJD9 388 aa16.95■□□□□ 0.3
PTCD3-220ENST00000627371 GLRA1P23415 457 aa16.95■□□□□ 0.3
PTCD3-220ENST00000627371 MAP2K4P45985 399 aa16.95■□□□□ 0.3
PTCD3-220ENST00000627371 DVL1P1P54792 670 aaPredicted RBP16.95■□□□□ 0.3
PTCD3-220ENST00000627371 GMFBP60983 142 aa16.95■□□□□ 0.3
PTCD3-220ENST00000627371 SEC61A1P61619 476 aaKnown RBP16.95■□□□□ 0.3
PTCD3-220ENST00000627371 ASPHD2Q6ICH7 369 aa16.95■□□□□ 0.3
PTCD3-220ENST00000627371 ZNF529Q6P280 563 aa16.95■□□□□ 0.3
PTCD3-220ENST00000627371 LYPD2Q6UXB3 125 aa16.95■□□□□ 0.3
PTCD3-220ENST00000627371 NLRC3Q7RTR2 1065 aa16.95■□□□□ 0.3
PTCD3-220ENST00000627371 OR8B3Q8NGG8 313 aa16.95■□□□□ 0.3
PTCD3-220ENST00000627371 SEH1LQ96EE3 360 aa16.95■□□□□ 0.3
PTCD3-220ENST00000627371 OR8B2Q96RD0 313 aa16.95■□□□□ 0.3
PTCD3-220ENST00000627371 LPAR2Q9HBW0 351 aa16.95■□□□□ 0.3
PTCD3-220ENST00000627371 ISYNA1Q9NPH2 558 aa16.95■□□□□ 0.3
PTCD3-220ENST00000627371 DNAJB11Q9UBS4 358 aa16.95■□□□□ 0.3
PTCD3-220ENST00000627371 KCNS2Q9ULS6 477 aa16.95■□□□□ 0.3
PTCD3-220ENST00000627371 SVEP1Q4LDE5 3571 aa16.94■□□□□ 0.3
PTCD3-220ENST00000627371 A8MXK9 166 aa16.94■□□□□ 0.3
PTCD3-220ENST00000627371 FOXH1O75593 365 aa16.94■□□□□ 0.3
PTCD3-220ENST00000627371 ACAA1P09110 424 aaPredicted RBP16.94■□□□□ 0.3
PTCD3-220ENST00000627371 MTCP1P56278 107 aa16.94■□□□□ 0.3
PTCD3-220ENST00000627371 GPR50Q13585 617 aa16.94■□□□□ 0.3
PTCD3-220ENST00000627371 ESCO2Q56NI9 601 aa16.94■□□□□ 0.3
PTCD3-220ENST00000627371 STUMQ69YW2 141 aa16.94■□□□□ 0.3
PTCD3-220ENST00000627371 GLCCI1Q86VQ1 547 aa16.94■□□□□ 0.3
PTCD3-220ENST00000627371 TMEM186Q96B77 213 aa16.94■□□□□ 0.3
PTCD3-220ENST00000627371 RASL12Q9NYN1 266 aa16.94■□□□□ 0.3
PTCD3-220ENST00000627371 TAS2R4Q9NYW5 299 aa16.94■□□□□ 0.3
PTCD3-220ENST00000627371 FN1P02751 2386 aaKnown RBP16.94■□□□□ 0.3
PTCD3-220ENST00000627371 TRAV20A0A0B4J274 112 aa16.93■□□□□ 0.3
PTCD3-220ENST00000627371 ADAM20O43506 726 aa16.93■□□□□ 0.3
PTCD3-220ENST00000627371 RAB3AP20336 220 aa16.93■□□□□ 0.3
PTCD3-220ENST00000627371 MLLT11Q13015 90 aaPredicted RBP16.93■□□□□ 0.3
PTCD3-220ENST00000627371 ZNF367Q7RTV3 350 aa16.93■□□□□ 0.3
PTCD3-220ENST00000627371 THRSPQ92748 146 aa16.93■□□□□ 0.3
PTCD3-220ENST00000627371 UFD1Q92890 307 aa16.93■□□□□ 0.3
PTCD3-220ENST00000627371 TMIGD2Q96BF3 282 aa16.93■□□□□ 0.3
PTCD3-220ENST00000627371 ZNF488Q96MN9 340 aa16.93■□□□□ 0.3
PTCD3-220ENST00000627371 OR14A2Q96R54 314 aa16.93■□□□□ 0.3
PTCD3-220ENST00000627371 NRIP2Q9BQI9 281 aa16.93■□□□□ 0.3
PTCD3-220ENST00000627371 SSBP3Q9BWW4 388 aaPredicted RBP16.93■□□□□ 0.3
PTCD3-220ENST00000627371 ACOT13Q9NPJ3 140 aa16.93■□□□□ 0.3
PTCD3-220ENST00000627371 NLKQ9UBE8 527 aa16.93■□□□□ 0.3
PTCD3-220ENST00000627371 KAAG1Q9UBP8 84 aa16.93■□□□□ 0.3
PTCD3-220ENST00000627371 CTSZQ9UBR2 303 aa16.93■□□□□ 0.3
PTCD3-220ENST00000627371 TRBV5-7A0A0A0MS05 114 aa16.92■□□□□ 0.3
PTCD3-220ENST00000627371 KIAA1324LA8MWY0 1029 aaPredicted RBP16.92■□□□□ 0.3
PTCD3-220ENST00000627371 ZNF879B4DU55 563 aa16.92■□□□□ 0.3
PTCD3-220ENST00000627371 PLATP00750 562 aa16.92■□□□□ 0.3
PTCD3-220ENST00000627371 HCKP08631 526 aa16.92■□□□□ 0.3
PTCD3-220ENST00000627371 HSMCR30P0CW71 290 aa16.92■□□□□ 0.3
PTCD3-220ENST00000627371 ZFP36P26651 326 aaKnown RBP16.92■□□□□ 0.3
PTCD3-220ENST00000627371 PITPNBP48739 271 aa16.92■□□□□ 0.3
PTCD3-220ENST00000627371 GNB2P62879 340 aa16.92■□□□□ 0.3
PTCD3-220ENST00000627371 LCN2P80188 198 aa16.92■□□□□ 0.3
PTCD3-220ENST00000627371 TPBGQ13641 420 aa16.92■□□□□ 0.3
PTCD3-220ENST00000627371 SMIM21Q3B7S5 101 aa16.92■□□□□ 0.3
PTCD3-220ENST00000627371 ZNF841Q6ZN19 808 aa16.92■□□□□ 0.3
PTCD3-220ENST00000627371 ACP7Q6ZNF0 438 aa16.92■□□□□ 0.3
PTCD3-220ENST00000627371 SLC25A26Q70HW3 274 aa16.92■□□□□ 0.3
PTCD3-220ENST00000627371 SVOPQ8N4V2 548 aa16.92■□□□□ 0.3
PTCD3-220ENST00000627371 MS4A15Q8N5U1 240 aa16.92■□□□□ 0.3
PTCD3-220ENST00000627371 OR51A2Q8NGJ7 313 aa16.92■□□□□ 0.3
PTCD3-220ENST00000627371 SPACA5Q96QH8 159 aa16.92■□□□□ 0.3
PTCD3-220ENST00000627371 MGLLQ99685 303 aa16.92■□□□□ 0.3
PTCD3-220ENST00000627371 DNTTIP1Q9H147 329 aa16.92■□□□□ 0.3
PTCD3-220ENST00000627371 HES4Q9HCC6 221 aa16.92■□□□□ 0.3
PTCD3-220ENST00000627371 SNTG1Q9NSN8 517 aa16.92■□□□□ 0.3
PTCD3-220ENST00000627371 HIF1ANQ9NWT6 349 aa16.92■□□□□ 0.3
PTCD3-220ENST00000627371 TMEM160Q9NX00 188 aa16.92■□□□□ 0.3
PTCD3-220ENST00000627371 POLR3KQ9Y2Y1 108 aaPredicted RBP16.92■□□□□ 0.3
PTCD3-220ENST00000627371 LRRC42Q9Y546 428 aa16.92■□□□□ 0.3
PTCD3-220ENST00000627371 INAFM1C9JVW0 142 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms