RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 TMIGD2Q96BF3 282 aa16.74■□□□□ 0.27
R3HCC1-210ENST00000625275 FAHD2AQ96GK7 314 aa16.74■□□□□ 0.27
R3HCC1-210ENST00000625275 MEGF10Q96KG7 1140 aa16.74■□□□□ 0.27
R3HCC1-210ENST00000625275 PPIL3Q9H2H8 161 aaKnown RBP16.74■□□□□ 0.27
R3HCC1-210ENST00000625275 ZCCHC4Q9H5U6 513 aa16.74■□□□□ 0.27
R3HCC1-210ENST00000625275 OCEL1Q9H607 264 aa16.74■□□□□ 0.27
R3HCC1-210ENST00000625275 NOX4Q9NPH5 578 aa16.74■□□□□ 0.27
R3HCC1-210ENST00000625275 IL19Q9UHD0 177 aa16.74■□□□□ 0.27
R3HCC1-210ENST00000625275 TRAV8-7A0A075B6U6 113 aa16.73■□□□□ 0.27
R3HCC1-210ENST00000625275 CD200P41217 278 aa16.73■□□□□ 0.27
R3HCC1-210ENST00000625275 ALDH3B2P48448 385 aa16.73■□□□□ 0.27
R3HCC1-210ENST00000625275 ZNF529Q6P280 563 aa16.73■□□□□ 0.27
R3HCC1-210ENST00000625275 TEX29Q8N6K0 151 aa16.73■□□□□ 0.27
R3HCC1-210ENST00000625275 OR13F1Q8NGS4 319 aa16.73■□□□□ 0.27
R3HCC1-210ENST00000625275 NPRL2Q8WTW4 380 aa16.73■□□□□ 0.27
R3HCC1-210ENST00000625275 RNF170Q96K19 258 aa16.73■□□□□ 0.27
R3HCC1-210ENST00000625275 TECTBQ96PL2 329 aa16.73■□□□□ 0.27
R3HCC1-210ENST00000625275 HIST1H2AAQ96QV6 131 aa16.73■□□□□ 0.27
R3HCC1-210ENST00000625275 GAL3ST1Q99999 423 aa16.73■□□□□ 0.27
R3HCC1-210ENST00000625275 MICU1Q9BPX6 476 aa16.73■□□□□ 0.27
R3HCC1-210ENST00000625275 RTL8AQ9BWD3 113 aa16.73■□□□□ 0.27
R3HCC1-210ENST00000625275 SCOCQ9UIL1 159 aa16.73■□□□□ 0.27
R3HCC1-210ENST00000625275 A0A0A6YYJ9 748 aa16.73■□□□□ 0.27
R3HCC1-210ENST00000625275 A0A0G2JMP0 313 aa16.73■□□□□ 0.27
R3HCC1-210ENST00000625275 A0A0X1KG70 313 aa16.73■□□□□ 0.27
R3HCC1-210ENST00000625275 SULT1B1O43704 296 aa16.73■□□□□ 0.27
R3HCC1-210ENST00000625275 ATF1P18846 271 aa16.73■□□□□ 0.27
R3HCC1-210ENST00000625275 SRP9P49458 86 aaKnown RBP16.73■□□□□ 0.27
R3HCC1-210ENST00000625275 GPM6AP51674 278 aa16.73■□□□□ 0.27
R3HCC1-210ENST00000625275 CNN3Q15417 329 aaKnown RBP16.73■□□□□ 0.27
R3HCC1-210ENST00000625275 CELF2-AS1Q8N7Q2 184 aa16.73■□□□□ 0.27
R3HCC1-210ENST00000625275 OR4M2Q8NGB6 313 aa16.73■□□□□ 0.27
R3HCC1-210ENST00000625275 OR5A2Q8NGI9 324 aa16.73■□□□□ 0.27
R3HCC1-210ENST00000625275 OR51A2Q8NGJ7 313 aa16.73■□□□□ 0.27
R3HCC1-210ENST00000625275 TRMT10AQ8TBZ6 339 aaKnown RBP16.73■□□□□ 0.27
R3HCC1-210ENST00000625275 YIPF6Q96EC8 236 aa16.73■□□□□ 0.27
R3HCC1-210ENST00000625275 C14orf119Q9NWQ9 140 aa16.73■□□□□ 0.27
R3HCC1-210ENST00000625275 STUB1Q9UNE7 303 aa16.73■□□□□ 0.27
R3HCC1-210ENST00000625275 NBEAL1Q6ZS30 2694 aa16.72■□□□□ 0.27
R3HCC1-210ENST00000625275 TRDV1A0A1B0GX56 115 aa16.72■□□□□ 0.27
R3HCC1-210ENST00000625275 PQLC2LA1A4F0 135 aa16.72■□□□□ 0.27
R3HCC1-210ENST00000625275 ISPDA4D126 451 aa16.72■□□□□ 0.27
R3HCC1-210ENST00000625275 OR5B21A6NL26 309 aa16.72■□□□□ 0.27
R3HCC1-210ENST00000625275 ZNF732B4DXR9 585 aa16.72■□□□□ 0.27
R3HCC1-210ENST00000625275 GPX5O75715 221 aa16.72■□□□□ 0.27
R3HCC1-210ENST00000625275 PTBP3O95758 552 aaKnown RBP16.72■□□□□ 0.27
R3HCC1-210ENST00000625275 UCHL1P09936 223 aa16.72■□□□□ 0.27
R3HCC1-210ENST00000625275 IGFBP3P17936 291 aaPredicted RBP16.72■□□□□ 0.27
R3HCC1-210ENST00000625275 FSTP19883 344 aa16.72■□□□□ 0.27
R3HCC1-210ENST00000625275 GALP22466 123 aa16.72■□□□□ 0.27
R3HCC1-210ENST00000625275 GADD45AP24522 165 aa16.72■□□□□ 0.27
R3HCC1-210ENST00000625275 PRAMEF6Q5VXH4 476 aa16.72■□□□□ 0.27
R3HCC1-210ENST00000625275 PEG10Q86TG7 708 aaKnown RBP16.72■□□□□ 0.27
R3HCC1-210ENST00000625275 OR1M1Q8NGA1 313 aa16.72■□□□□ 0.27
R3HCC1-210ENST00000625275 OR51E2Q9H255 320 aa16.72■□□□□ 0.27
R3HCC1-210ENST00000625275 CKLFQ9UBR5 152 aa16.72■□□□□ 0.27
R3HCC1-210ENST00000625275 ALX3O95076 343 aa16.71■□□□□ 0.27
R3HCC1-210ENST00000625275 GRPP07492 148 aa16.71■□□□□ 0.27
R3HCC1-210ENST00000625275 TNFRSF1AP19438 455 aa16.71■□□□□ 0.27
R3HCC1-210ENST00000625275 RAB3AP20336 220 aa16.71■□□□□ 0.27
R3HCC1-210ENST00000625275 AZGP1P25311 298 aaKnown RBP16.71■□□□□ 0.27
R3HCC1-210ENST00000625275 GATA4P43694 442 aa16.71■□□□□ 0.27
R3HCC1-210ENST00000625275 GNG3P63215 75 aa16.71■□□□□ 0.27
R3HCC1-210ENST00000625275 MZT1Q08AG7 82 aa16.71■□□□□ 0.27
R3HCC1-210ENST00000625275 ZNF154Q13106 437 aa16.71■□□□□ 0.27
R3HCC1-210ENST00000625275 HNRNPA0Q13151 305 aaKnown RBP16.71■□□□□ 0.27
R3HCC1-210ENST00000625275 MPPED2Q15777 294 aa16.71■□□□□ 0.27
R3HCC1-210ENST00000625275 FAM76BQ5HYJ3 339 aa16.71■□□□□ 0.27
R3HCC1-210ENST00000625275 C1orf229Q6ZS94 237 aaPredicted RBP16.71■□□□□ 0.27
R3HCC1-210ENST00000625275 PHYHIPQ92561 330 aa16.71■□□□□ 0.27
R3HCC1-210ENST00000625275 SPSB1Q96BD6 273 aa16.71■□□□□ 0.27
R3HCC1-210ENST00000625275 TMPRSS13Q9BYE2 586 aa16.71■□□□□ 0.27
R3HCC1-210ENST00000625275 GCM1Q9NP62 436 aa16.71■□□□□ 0.27
R3HCC1-210ENST00000625275 SLC7A11Q9UPY5 501 aa16.71■□□□□ 0.27
R3HCC1-210ENST00000625275 IGKV1-27A0A075B6S5 117 aa16.7■□□□□ 0.26
R3HCC1-210ENST00000625275 LOC105371242A0A075B767 164 aa16.7■□□□□ 0.26
R3HCC1-210ENST00000625275 FAM230AA0A1W2PPH8 454 aa16.7■□□□□ 0.26
R3HCC1-210ENST00000625275 TMEM210A6NLX4 147 aa16.7■□□□□ 0.26
R3HCC1-210ENST00000625275 J3QLI3 93 aa16.7■□□□□ 0.26
R3HCC1-210ENST00000625275 VENTXO95231 258 aa16.7■□□□□ 0.26
R3HCC1-210ENST00000625275 AVPP01185 164 aa16.7■□□□□ 0.26
R3HCC1-210ENST00000625275 RBMXP38159 391 aaKnown RBP16.7■□□□□ 0.26
R3HCC1-210ENST00000625275 RPL5P46777 297 aaKnown RBP16.7■□□□□ 0.26
R3HCC1-210ENST00000625275 PPP3R1P63098 170 aa16.7■□□□□ 0.26
R3HCC1-210ENST00000625275 HSD17B12Q53GQ0 312 aa16.7■□□□□ 0.26
R3HCC1-210ENST00000625275 DCAF12L2Q5VW00 463 aa16.7■□□□□ 0.26
R3HCC1-210ENST00000625275 CHCHD6Q9BRQ6 235 aa16.7■□□□□ 0.26
R3HCC1-210ENST00000625275 EXOSC4Q9NPD3 245 aaKnown RBP16.7■□□□□ 0.26
R3HCC1-210ENST00000625275 FOXJ3Q9UPW0 622 aa16.7■□□□□ 0.26
R3HCC1-210ENST00000625275 HAX1O00165 279 aa16.69■□□□□ 0.26
R3HCC1-210ENST00000625275 ARL6IP5O75915 188 aa16.69■□□□□ 0.26
R3HCC1-210ENST00000625275 OCMP0CE72 109 aaPredicted RBP16.69■□□□□ 0.26
R3HCC1-210ENST00000625275 EPHA1P21709 976 aa16.69■□□□□ 0.26
R3HCC1-210ENST00000625275 PRKACBP22694 351 aa16.69■□□□□ 0.26
R3HCC1-210ENST00000625275 CALRP27797 417 aaKnown RBP16.69■□□□□ 0.26
R3HCC1-210ENST00000625275 FGF9P31371 208 aaPredicted RBP16.69■□□□□ 0.26
R3HCC1-210ENST00000625275 FUT6P51993 359 aa16.69■□□□□ 0.26
R3HCC1-210ENST00000625275 C22orf42Q6IC83 251 aa16.69■□□□□ 0.26
R3HCC1-210ENST00000625275 MOGAT3Q86VF5 341 aa16.69■□□□□ 0.26
R3HCC1-210ENST00000625275 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms