RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 SLC5A7Q9GZV3 580 aa7.67□□□□□ -1.18
VCL-207ENST00000624354 GPR84Q9NQS5 396 aa7.67□□□□□ -1.18
VCL-207ENST00000624354 ALKBH4Q9NXW9 302 aa7.67□□□□□ -1.18
VCL-207ENST00000624354 RP1L1Q8IWN7 2480 aaPredicted RBP7.67□□□□□ -1.18
VCL-207ENST00000624354 TMEM131Q92545 1883 aa7.67□□□□□ -1.18
VCL-207ENST00000624354 A0A1W2PP11 408 aa7.67□□□□□ -1.18
VCL-207ENST00000624354 BCAT2O15382 392 aaPredicted RBP7.67□□□□□ -1.18
VCL-207ENST00000624354 RAD51DO75771 328 aa7.67□□□□□ -1.18
VCL-207ENST00000624354 CLRN1P58418 232 aa7.67□□□□□ -1.18
VCL-207ENST00000624354 CSNK2A1P68400 391 aaPredicted RBP7.67□□□□□ -1.18
VCL-207ENST00000624354 DEFB133Q30KQ1 61 aa7.67□□□□□ -1.18
VCL-207ENST00000624354 C16orf47Q6ZP98 133 aaPredicted RBP7.67□□□□□ -1.18
VCL-207ENST00000624354 LANCL3Q6ZV70 420 aa7.67□□□□□ -1.18
VCL-207ENST00000624354 CSNK2A3Q8NEV1 391 aa7.67□□□□□ -1.18
VCL-207ENST00000624354 OR1J1Q8NGS3 322 aa7.67□□□□□ -1.18
VCL-207ENST00000624354 OR1L3Q8NH93 324 aa7.67□□□□□ -1.18
VCL-207ENST00000624354 C1orf147Q96MC9 270 aaPredicted RBP7.67□□□□□ -1.18
VCL-207ENST00000624354 RTBDNQ9BSG5 229 aaPredicted RBP7.67□□□□□ -1.18
VCL-207ENST00000624354 RAB33BQ9H082 229 aa7.67□□□□□ -1.18
VCL-207ENST00000624354 LMAN1LQ9HAT1 526 aa7.67□□□□□ -1.18
VCL-207ENST00000624354 CACNA1GO43497 2377 aa7.66□□□□□ -1.18
VCL-207ENST00000624354 UNC13CQ8NB66 2214 aa7.66□□□□□ -1.18
VCL-207ENST00000624354 LIPT2A6NK58 231 aa7.66□□□□□ -1.18
VCL-207ENST00000624354 FIGNL2A6NMB9 653 aa7.66□□□□□ -1.18
VCL-207ENST00000624354 SDCBPO00560 298 aaPredicted RBP7.66□□□□□ -1.18
VCL-207ENST00000624354 ADAM10O14672 748 aa7.66□□□□□ -1.18
VCL-207ENST00000624354 SFTPBP07988 381 aa7.66□□□□□ -1.18
VCL-207ENST00000624354 DHPSP49366 369 aaPredicted RBP7.66□□□□□ -1.18
VCL-207ENST00000624354 SUMO3P55854 103 aaPredicted RBP7.66□□□□□ -1.18
VCL-207ENST00000624354 FBXW4P57775 412 aa7.66□□□□□ -1.18
VCL-207ENST00000624354 TAS2R46P59540 309 aa7.66□□□□□ -1.18
VCL-207ENST00000624354 LSM6P62312 80 aaKnown RBP7.66□□□□□ -1.18
VCL-207ENST00000624354 FOXO1Q12778 655 aa7.66□□□□□ -1.18
VCL-207ENST00000624354 FOXF1Q12946 379 aa7.66□□□□□ -1.18
VCL-207ENST00000624354 RHEBQ15382 184 aa7.66□□□□□ -1.18
VCL-207ENST00000624354 DNLZQ5SXM8 178 aa7.66□□□□□ -1.18
VCL-207ENST00000624354 RPL7L1Q6DKI1 246 aaKnown RBP7.66□□□□□ -1.18
VCL-207ENST00000624354 OR2A2Q6IF42 318 aa7.66□□□□□ -1.18
VCL-207ENST00000624354 Q6ZRG5 221 aa7.66□□□□□ -1.18
VCL-207ENST00000624354 HIST2H3AQ71DI3 136 aa7.66□□□□□ -1.18
VCL-207ENST00000624354 LHFPL1Q86WI0 220 aa7.66□□□□□ -1.18
VCL-207ENST00000624354 POC1AQ8NBT0 407 aa7.66□□□□□ -1.18
VCL-207ENST00000624354 OR8B12Q8NGG6 310 aa7.66□□□□□ -1.18
VCL-207ENST00000624354 OR13G1Q8NGZ3 307 aa7.66□□□□□ -1.18
VCL-207ENST00000624354 MRPL37Q9BZE1 423 aaKnown RBP7.66□□□□□ -1.18
VCL-207ENST00000624354 OR10A2Q9H208 303 aa7.66□□□□□ -1.18
VCL-207ENST00000624354 PARP11Q9NR21 331 aa7.66□□□□□ -1.18
VCL-207ENST00000624354 SLC2A4RGQ9NR83 387 aa7.66□□□□□ -1.18
VCL-207ENST00000624354 EHFQ9NZC4 300 aa7.66□□□□□ -1.18
VCL-207ENST00000624354 ZDHHC8Q9ULC8 765 aa7.66□□□□□ -1.18
VCL-207ENST00000624354 LHFPL6Q9Y693 200 aa7.66□□□□□ -1.18
VCL-207ENST00000624354 OR2C1O95371 312 aa7.66□□□□□ -1.18
VCL-207ENST00000624354 OR8U9P0C7N5 309 aa7.66□□□□□ -1.18
VCL-207ENST00000624354 GLRA1P23415 457 aa7.66□□□□□ -1.18
VCL-207ENST00000624354 ID4P47928 161 aa7.66□□□□□ -1.18
VCL-207ENST00000624354 PCP4P48539 62 aa7.66□□□□□ -1.18
VCL-207ENST00000624354 SNU13P55769 128 aaKnown RBP7.66□□□□□ -1.18
VCL-207ENST00000624354 ZNF121P58317 390 aaPredicted RBP7.66□□□□□ -1.18
VCL-207ENST00000624354 RAB1AP62820 205 aa7.66□□□□□ -1.18
VCL-207ENST00000624354 GABREP78334 506 aa7.66□□□□□ -1.18
VCL-207ENST00000624354 FOXRED2Q8IWF2 684 aa7.66□□□□□ -1.18
VCL-207ENST00000624354 UEVLDQ8IX04 471 aa7.66□□□□□ -1.18
VCL-207ENST00000624354 PNLDC1Q8NA58 520 aaKnown RBP7.66□□□□□ -1.18
VCL-207ENST00000624354 OR8U1Q8NH10 309 aa7.66□□□□□ -1.18
VCL-207ENST00000624354 THAP3Q8WTV1 239 aaPredicted RBP7.66□□□□□ -1.18
VCL-207ENST00000624354 FAM86C1Q9NVL1 165 aa7.66□□□□□ -1.18
VCL-207ENST00000624354 KLHL13Q9P2N7 655 aa7.66□□□□□ -1.18
VCL-207ENST00000624354 KCNIP3Q9Y2W7 256 aa7.66□□□□□ -1.18
VCL-207ENST00000624354 IGHV3-20A0A0C4DH32 117 aa7.65□□□□□ -1.18
VCL-207ENST00000624354 A0A1B0GX78 115 aa7.65□□□□□ -1.18
VCL-207ENST00000624354 ZNF726A6NNF4 738 aa7.65□□□□□ -1.18
VCL-207ENST00000624354 TSPAN15O95858 294 aa7.65□□□□□ -1.18
VCL-207ENST00000624354 IGHG1P01857 330 aa7.65□□□□□ -1.18
VCL-207ENST00000624354 SULT1A2P50226 295 aa7.65□□□□□ -1.18
VCL-207ENST00000624354 NUTF2P61970 127 aaKnown RBP7.65□□□□□ -1.18
VCL-207ENST00000624354 OR8G1Q15617 311 aa7.65□□□□□ -1.18
VCL-207ENST00000624354 AADACL3Q5VUY0 350 aa7.65□□□□□ -1.18
VCL-207ENST00000624354 HEPN1Q6WQI6 88 aa7.65□□□□□ -1.18
VCL-207ENST00000624354 SHISA6Q6ZSJ9 500 aa7.65□□□□□ -1.18
VCL-207ENST00000624354 OR51T1Q8NGJ9 327 aa7.65□□□□□ -1.18
VCL-207ENST00000624354 CD300LFQ8TDQ1 290 aa7.65□□□□□ -1.18
VCL-207ENST00000624354 EMG1Q92979 244 aaKnown RBP7.65□□□□□ -1.18
VCL-207ENST00000624354 MRPL13Q9BYD1 178 aaKnown RBP7.65□□□□□ -1.18
VCL-207ENST00000624354 C14orf166Q9Y224 244 aaKnown RBP7.65□□□□□ -1.18
VCL-207ENST00000624354 OSGIN2Q9Y236 505 aa7.65□□□□□ -1.18
VCL-207ENST00000624354 CPAMD8Q8IZJ3 1885 aa7.65□□□□□ -1.18
VCL-207ENST00000624354 A0A1W2PNV4 684 aa7.65□□□□□ -1.18
VCL-207ENST00000624354 UMAD1C9J7I0 102 aa7.65□□□□□ -1.18
VCL-207ENST00000624354 PPP1R2P9O14990 202 aa7.65□□□□□ -1.18
VCL-207ENST00000624354 KNG1P01042 644 aa7.65□□□□□ -1.18
VCL-207ENST00000624354 CD38P28907 300 aa7.65□□□□□ -1.18
VCL-207ENST00000624354 RBMXP38159 391 aaKnown RBP7.65□□□□□ -1.18
VCL-207ENST00000624354 IL15RAQ13261 267 aa7.65□□□□□ -1.18
VCL-207ENST00000624354 ZNF674Q2M3X9 581 aa7.65□□□□□ -1.18
VCL-207ENST00000624354 C14orf28Q4W4Y0 310 aa7.65□□□□□ -1.18
VCL-207ENST00000624354 DOK3Q7L591 496 aa7.65□□□□□ -1.18
VCL-207ENST00000624354 GALNTL5Q7Z4T8 443 aa7.65□□□□□ -1.18
VCL-207ENST00000624354 C17orf82Q86X59 251 aaPredicted RBP7.65□□□□□ -1.18
VCL-207ENST00000624354 ZNF283Q8N7M2 679 aa7.65□□□□□ -1.18
VCL-207ENST00000624354 NOXO1Q8NFA2 376 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms