RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 PRELID1Q9Y255 219 aa8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 MRPS18CQ9Y3D5 142 aaKnown RBP8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 CACNA1EQ15878 2313 aa8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 ASCC3Q8N3C0 2202 aaKnown RBP8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 CABIN1Q9Y6J0 2220 aa8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 PI4KAP42356 2102 aa8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 NSG1A0A0A6YYJ2 146 aa8.37□□□□□ -1.07
IGHV3-54-201ENST00000622166 TNFSF11O14788 317 aa8.37□□□□□ -1.07
IGHV3-54-201ENST00000622166 SIGLEC5O15389 551 aa8.37□□□□□ -1.07
IGHV3-54-201ENST00000622166 NUPL2O15504 423 aaKnown RBP8.37□□□□□ -1.07
IGHV3-54-201ENST00000622166 NDUFA2O43678 99 aa8.37□□□□□ -1.07
IGHV3-54-201ENST00000622166 CST4P01036 141 aa8.37□□□□□ -1.07
IGHV3-54-201ENST00000622166 IFNA21P01568 189 aa8.37□□□□□ -1.07
IGHV3-54-201ENST00000622166 HOXB5P09067 269 aa8.37□□□□□ -1.07
IGHV3-54-201ENST00000622166 TDGF1P13385 188 aa8.37□□□□□ -1.07
IGHV3-54-201ENST00000622166 ADCYAP1P18509 176 aa8.37□□□□□ -1.07
IGHV3-54-201ENST00000622166 IL32P24001 234 aa8.37□□□□□ -1.07
IGHV3-54-201ENST00000622166 ACKR3P25106 362 aa8.37□□□□□ -1.07
IGHV3-54-201ENST00000622166 FOLR3P41439 243 aa8.37□□□□□ -1.07
IGHV3-54-201ENST00000622166 SULT1A2P50226 295 aa8.37□□□□□ -1.07
IGHV3-54-201ENST00000622166 UCP3P55916 312 aa8.37□□□□□ -1.07
IGHV3-54-201ENST00000622166 BLOC1S1P78537 153 aa8.37□□□□□ -1.07
IGHV3-54-201ENST00000622166 FLI1Q01543 452 aaPredicted RBP8.37□□□□□ -1.07
IGHV3-54-201ENST00000622166 SIGLEC14Q08ET2 396 aa8.37□□□□□ -1.07
IGHV3-54-201ENST00000622166 ABLIM2Q6H8Q1 611 aa8.37□□□□□ -1.07
IGHV3-54-201ENST00000622166 PUSL1Q8N0Z8 303 aaKnown RBP8.37□□□□□ -1.07
IGHV3-54-201ENST00000622166 LRTM2Q8N967 370 aa8.37□□□□□ -1.07
IGHV3-54-201ENST00000622166 OR51F2Q8NH61 342 aa8.37□□□□□ -1.07
IGHV3-54-201ENST00000622166 ZNF837Q96EG3 531 aaPredicted RBP8.37□□□□□ -1.07
IGHV3-54-201ENST00000622166 GALNT14Q96FL9 552 aa8.37□□□□□ -1.07
IGHV3-54-201ENST00000622166 REEP6Q96HR9 211 aa8.37□□□□□ -1.07
IGHV3-54-201ENST00000622166 ZNF2Q9BSG1 426 aaPredicted RBP8.37□□□□□ -1.07
IGHV3-54-201ENST00000622166 SEC11CQ9BY50 192 aa8.37□□□□□ -1.07
IGHV3-54-201ENST00000622166 ARV1Q9H2C2 271 aa8.37□□□□□ -1.07
IGHV3-54-201ENST00000622166 PRO3102Q9H379 93 aa8.37□□□□□ -1.07
IGHV3-54-201ENST00000622166 RGCCQ9H4X1 137 aa8.37□□□□□ -1.07
IGHV3-54-201ENST00000622166 BCO1Q9HAY6 547 aa8.37□□□□□ -1.07
IGHV3-54-201ENST00000622166 PLEKHA2Q9HB19 425 aa8.37□□□□□ -1.07
IGHV3-54-201ENST00000622166 ELL3Q9HB65 397 aaPredicted RBP8.37□□□□□ -1.07
IGHV3-54-201ENST00000622166 FSCN3Q9NQT6 498 aa8.37□□□□□ -1.07
IGHV3-54-201ENST00000622166 PCDHB16Q9NRJ7 776 aa8.37□□□□□ -1.07
IGHV3-54-201ENST00000622166 ZNF701Q9NV72 531 aaPredicted RBP8.37□□□□□ -1.07
IGHV3-54-201ENST00000622166 NECAP2Q9NVZ3 263 aa8.37□□□□□ -1.07
IGHV3-54-201ENST00000622166 SLC39A1Q9NY26 324 aa8.37□□□□□ -1.07
IGHV3-54-201ENST00000622166 AK3Q9UIJ7 227 aa8.37□□□□□ -1.07
IGHV3-54-201ENST00000622166 PADI1Q9ULC6 663 aa8.37□□□□□ -1.07
IGHV3-54-201ENST00000622166 POMT1Q9Y6A1 747 aa8.37□□□□□ -1.07
IGHV3-54-201ENST00000622166 IGKV1-27A0A075B6S5 117 aa8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 CCDC187A0A096LP49 1063 aa8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 ZNF705EA8MWA4 302 aaPredicted RBP8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 H7C1Q1 480 aa8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 GDF9O60383 454 aa8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 DEDDO75618 318 aa8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 TSPAN9O75954 239 aa8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 SFTPBP07988 381 aa8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 FCGR3AP08637 254 aa8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 ZNF728P0DKX0 622 aa8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 OR5H8P0DN80 308 aa8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 CCL4P13236 92 aa8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 ZNF32P17041 273 aa8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 GABRR1P24046 479 aa8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 RPL12P30050 165 aaKnown RBP8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 RBP2P50120 134 aa8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 PCBD1P61457 104 aa8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 HGFACQ04756 655 aa8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 SPEM2Q0P670 501 aa8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 TMEM187Q14656 261 aa8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 RSU1Q15404 277 aa8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 IAH1Q2TAA2 248 aaPredicted RBP8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 DMRTC1Q5HYR2 192 aa8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 RIPPLY2Q5TAB7 128 aa8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 ZNF468Q5VIY5 522 aaPredicted RBP8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 GGNBP1Q5YKI7 109 aa8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 RPL7L1Q6DKI1 246 aaKnown RBP8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 ZNF774Q6NX45 483 aa8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 H3F3CQ6NXT2 135 aa8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 BTNL8Q6UX41 500 aa8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 AAED1Q7RTV5 226 aa8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 GALNTL5Q7Z4T8 443 aa8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 GGNQ86UU5 652 aa8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 TMEM200AQ86VY9 491 aa8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 LDLRAD3Q86YD5 345 aa8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 UBALD2Q8IYN6 164 aa8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 SPAG16Q8N0X2 631 aa8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 FNDC9Q8TBE3 224 aa8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 MRPL24Q96A35 216 aaKnown RBP8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 NARS2Q96I59 477 aaKnown RBP8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 ADGRG7Q96K78 797 aa8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 JSRP1Q96MG2 331 aaPredicted RBP8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 TECTBQ96PL2 329 aa8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 PRRX2Q99811 253 aa8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 CMSS1Q9BQ75 279 aaKnown RBP8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 HDHD3Q9BSH5 251 aaPredicted RBP8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 SUCNR1Q9BXA5 334 aa8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 WNT5BQ9H1J7 359 aa8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 NAA60Q9H7X0 242 aa8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 GSKIPQ9P0R6 139 aa8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 TIMM10BQ9Y5J6 103 aa8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 CEP290O15078 2479 aa8.36□□□□□ -1.07
IGHV3-54-201ENST00000622166 hCG_38984A0A1B0GV85 526 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms