RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 TEX29Q8N6K0 151 aa6.85□□□□□ -1.31
NEK3-209ENST00000618856 OR10AC1Q8NH08 325 aa6.85□□□□□ -1.31
NEK3-209ENST00000618856 OR52N1Q8NH53 320 aa6.85□□□□□ -1.31
NEK3-209ENST00000618856 ZNF671Q8TAW3 534 aa6.85□□□□□ -1.31
NEK3-209ENST00000618856 RAB40AQ8WXH6 277 aa6.85□□□□□ -1.31
NEK3-209ENST00000618856 RGP1Q92546 391 aaPredicted RBP6.85□□□□□ -1.31
NEK3-209ENST00000618856 SEH1LQ96EE3 360 aa6.85□□□□□ -1.31
NEK3-209ENST00000618856 SDSLQ96GA7 329 aa6.85□□□□□ -1.31
NEK3-209ENST00000618856 FAHD2AQ96GK7 314 aa6.85□□□□□ -1.31
NEK3-209ENST00000618856 ANKRD60Q9BZ19 345 aa6.85□□□□□ -1.31
NEK3-209ENST00000618856 WDR13Q9H1Z4 485 aa6.85□□□□□ -1.31
NEK3-209ENST00000618856 VCXQ9H320 206 aa6.85□□□□□ -1.31
NEK3-209ENST00000618856 SEBOXQ9HB31 216 aaPredicted RBP6.85□□□□□ -1.31
NEK3-209ENST00000618856 SMURF1Q9HCE7 757 aa6.85□□□□□ -1.31
NEK3-209ENST00000618856 GPR173Q9NS66 373 aa6.85□□□□□ -1.31
NEK3-209ENST00000618856 BABAM2Q9NXR7 383 aa6.85□□□□□ -1.31
NEK3-209ENST00000618856 CLN8Q9UBY8 286 aa6.85□□□□□ -1.31
NEK3-209ENST00000618856 CLEC2DQ9UHP7 191 aa6.85□□□□□ -1.31
NEK3-209ENST00000618856 HHLA2Q9UM44 414 aa6.85□□□□□ -1.31
NEK3-209ENST00000618856 GTF2A1LQ9UNN4 478 aa6.85□□□□□ -1.31
NEK3-209ENST00000618856 IGKV1D-17A0A075B6S4 117 aa6.84□□□□□ -1.31
NEK3-209ENST00000618856 IGHV3OR15-7A0A075B7D8 119 aa6.84□□□□□ -1.31
NEK3-209ENST00000618856 A0A1B0GW55 424 aa6.84□□□□□ -1.31
NEK3-209ENST00000618856 hCG_1807616A0A1W2PRN6 198 aa6.84□□□□□ -1.31
NEK3-209ENST00000618856 AKR7A2O43488 359 aa6.84□□□□□ -1.31
NEK3-209ENST00000618856 ADAM20O43506 726 aa6.84□□□□□ -1.31
NEK3-209ENST00000618856 SYNGR1O43759 233 aa6.84□□□□□ -1.31
NEK3-209ENST00000618856 XPNPEP2O43895 674 aa6.84□□□□□ -1.31
NEK3-209ENST00000618856 ECDO95905 644 aaPredicted RBP6.84□□□□□ -1.31
NEK3-209ENST00000618856 CD1AP06126 327 aa6.84□□□□□ -1.31
NEK3-209ENST00000618856 DUX4L2P0CJ85 424 aa6.84□□□□□ -1.31
NEK3-209ENST00000618856 DUX4L3P0CJ86 424 aa6.84□□□□□ -1.31
NEK3-209ENST00000618856 DUX4L4P0CJ87 422 aa6.84□□□□□ -1.31
NEK3-209ENST00000618856 DUX4L5P0CJ88 424 aa6.84□□□□□ -1.31
NEK3-209ENST00000618856 DUX4L6P0CJ89 424 aa6.84□□□□□ -1.31
NEK3-209ENST00000618856 DUX4L7P0CJ90 424 aa6.84□□□□□ -1.31
NEK3-209ENST00000618856 PSG2P11465 335 aa6.84□□□□□ -1.31
NEK3-209ENST00000618856 ADRA2CP18825 462 aa6.84□□□□□ -1.31
NEK3-209ENST00000618856 ATF1P18846 271 aa6.84□□□□□ -1.31
NEK3-209ENST00000618856 MYF6P23409 242 aa6.84□□□□□ -1.31
NEK3-209ENST00000618856 HAAOP46952 286 aa6.84□□□□□ -1.31
NEK3-209ENST00000618856 GTF2A1P52655 376 aaPredicted RBP6.84□□□□□ -1.31
NEK3-209ENST00000618856 GBX2P52951 348 aaPredicted RBP6.84□□□□□ -1.31
NEK3-209ENST00000618856 GNB2P62879 340 aa6.84□□□□□ -1.31
NEK3-209ENST00000618856 ST3GAL4Q11206 333 aa6.84□□□□□ -1.31
NEK3-209ENST00000618856 CDK5R1Q15078 307 aa6.84□□□□□ -1.31
NEK3-209ENST00000618856 DMRTC1Q5HYR2 192 aa6.84□□□□□ -1.31
NEK3-209ENST00000618856 KLF17Q5JT82 389 aaPredicted RBP6.84□□□□□ -1.31
NEK3-209ENST00000618856 C6orf141Q5SZD1 244 aa6.84□□□□□ -1.31
NEK3-209ENST00000618856 OR2G6Q5TZ20 316 aa6.84□□□□□ -1.31
NEK3-209ENST00000618856 CD276Q5ZPR3 534 aa6.84□□□□□ -1.31
NEK3-209ENST00000618856 DMKNQ6E0U4 476 aaPredicted RBP6.84□□□□□ -1.31
NEK3-209ENST00000618856 XAF1Q6GPH4 301 aa6.84□□□□□ -1.31
NEK3-209ENST00000618856 DUX4L9Q6RFH8 374 aaPredicted RBP6.84□□□□□ -1.31
NEK3-209ENST00000618856 KCTD8Q6ZWB6 473 aa6.84□□□□□ -1.31
NEK3-209ENST00000618856 C8orf46Q8TAG6 207 aa6.84□□□□□ -1.31
NEK3-209ENST00000618856 SPSB1Q96BD6 273 aa6.84□□□□□ -1.31
NEK3-209ENST00000618856 UPRTQ96BW1 309 aa6.84□□□□□ -1.31
NEK3-209ENST00000618856 FGGYQ96C11 551 aa6.84□□□□□ -1.31
NEK3-209ENST00000618856 SMIM19Q96E16 107 aa6.84□□□□□ -1.31
NEK3-209ENST00000618856 GAFA1Q96PS6 74 aa6.84□□□□□ -1.31
NEK3-209ENST00000618856 DUSP21Q9H596 190 aa6.84□□□□□ -1.31
NEK3-209ENST00000618856 C7orf69Q9H7B7 122 aa6.84□□□□□ -1.31
NEK3-209ENST00000618856 NLKQ9UBE8 527 aa6.84□□□□□ -1.31
NEK3-209ENST00000618856 DUX4Q9UBX2 424 aa6.84□□□□□ -1.31
NEK3-209ENST00000618856 OR5V1Q9UGF6 321 aa6.84□□□□□ -1.31
NEK3-209ENST00000618856 SIRT4Q9Y6E7 314 aaPredicted RBP6.84□□□□□ -1.31
NEK3-209ENST00000618856 ARHGAP32A7KAX9 2087 aa6.84□□□□□ -1.31
NEK3-209ENST00000618856 LOC105371242A0A075B767 164 aa6.83□□□□□ -1.32
NEK3-209ENST00000618856 TRBV2A0A0J9YWF9 115 aa6.83□□□□□ -1.32
NEK3-209ENST00000618856 OR2AT4A6NND4 320 aa6.83□□□□□ -1.32
NEK3-209ENST00000618856 DVL1O14640 695 aa6.83□□□□□ -1.32
NEK3-209ENST00000618856 SIGLEC5O15389 551 aa6.83□□□□□ -1.32
NEK3-209ENST00000618856 TMPRSS2O15393 492 aa6.83□□□□□ -1.32
NEK3-209ENST00000618856 GPX5O75715 221 aa6.83□□□□□ -1.32
NEK3-209ENST00000618856 ATP6V1G2O95670 118 aa6.83□□□□□ -1.32
NEK3-209ENST00000618856 PLATP00750 562 aa6.83□□□□□ -1.32
NEK3-209ENST00000618856 SERPINA3P01011 423 aa6.83□□□□□ -1.32
NEK3-209ENST00000618856 IFNA2P01563 188 aa6.83□□□□□ -1.32
NEK3-209ENST00000618856 LIPFP07098 398 aa6.83□□□□□ -1.32
NEK3-209ENST00000618856 MMP9P14780 707 aa6.83□□□□□ -1.32
NEK3-209ENST00000618856 GLRA1P23415 457 aa6.83□□□□□ -1.32
NEK3-209ENST00000618856 C21orf33P30042 268 aaPredicted RBP6.83□□□□□ -1.32
NEK3-209ENST00000618856 RBP2P50120 134 aa6.83□□□□□ -1.32
NEK3-209ENST00000618856 CAV3P56539 151 aa6.83□□□□□ -1.32
NEK3-209ENST00000618856 RPS11P62280 158 aaKnown RBP eCLIP6.83□□□□□ -1.32
NEK3-209ENST00000618856 SLC35A2P78381 396 aa6.83□□□□□ -1.32
NEK3-209ENST00000618856 ACSM1Q08AH1 577 aa6.83□□□□□ -1.32
NEK3-209ENST00000618856 IRF3Q14653 427 aa6.83□□□□□ -1.32
NEK3-209ENST00000618856 CNN3Q15417 329 aaKnown RBP6.83□□□□□ -1.32
NEK3-209ENST00000618856 DGUOKQ16854 277 aa6.83□□□□□ -1.32
NEK3-209ENST00000618856 TMPRSS11AQ6ZMR5 421 aa6.83□□□□□ -1.32
NEK3-209ENST00000618856 ACP7Q6ZNF0 438 aa6.83□□□□□ -1.32
NEK3-209ENST00000618856 C9orf139Q6ZV77 190 aa6.83□□□□□ -1.32
NEK3-209ENST00000618856 ZNF771Q7L3S4 317 aaPredicted RBP6.83□□□□□ -1.32
NEK3-209ENST00000618856 SLC36A1Q7Z2H8 476 aa6.83□□□□□ -1.32
NEK3-209ENST00000618856 ANGPTL5Q86XS5 388 aa6.83□□□□□ -1.32
NEK3-209ENST00000618856 FAM216BQ8N7L0 139 aa6.83□□□□□ -1.32
NEK3-209ENST00000618856 ZNF676Q8N7Q3 588 aa6.83□□□□□ -1.32
NEK3-209ENST00000618856 NANOGP1Q8N7R0 232 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms