RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 DBHP09172 617 aa17.82■□□□□ 0.44
NEK3-208ENST00000618534 TMEM225BP0DP42 221 aa17.82■□□□□ 0.44
NEK3-208ENST00000618534 CSNK1A1P48729 337 aa17.82■□□□□ 0.44
NEK3-208ENST00000618534 RAB5BP61020 215 aa17.82■□□□□ 0.44
NEK3-208ENST00000618534 SNRPEP62304 92 aaKnown RBP17.82■□□□□ 0.44
NEK3-208ENST00000618534 FAM3AP98173 230 aa17.82■□□□□ 0.44
NEK3-208ENST00000618534 HGFACQ04756 655 aa17.82■□□□□ 0.44
NEK3-208ENST00000618534 PPA1Q15181 289 aa17.82■□□□□ 0.44
NEK3-208ENST00000618534 RPUSD3Q6P087 351 aaKnown RBP17.82■□□□□ 0.44
NEK3-208ENST00000618534 C15orf54Q8N8G6 183 aa17.82■□□□□ 0.44
NEK3-208ENST00000618534 GJC3Q8NFK1 279 aa17.82■□□□□ 0.44
NEK3-208ENST00000618534 SLC25A43Q8WUT9 341 aaPredicted RBP17.82■□□□□ 0.44
NEK3-208ENST00000618534 Q96M66 194 aa17.82■□□□□ 0.44
NEK3-208ENST00000618534 PIGQQ9BRB3 760 aa17.82■□□□□ 0.44
NEK3-208ENST00000618534 CHRDQ9H2X0 955 aa17.82■□□□□ 0.44
NEK3-208ENST00000618534 ZNF581Q9P0T4 197 aa17.82■□□□□ 0.44
NEK3-208ENST00000618534 ANXA10Q9UJ72 324 aa17.82■□□□□ 0.44
NEK3-208ENST00000618534 HDGFL3Q9Y3E1 203 aa17.82■□□□□ 0.44
NEK3-208ENST00000618534 KPTNQ9Y664 436 aa17.82■□□□□ 0.44
NEK3-208ENST00000618534 GUCA1AP43080 201 aaPredicted RBP17.82■□□□□ 0.44
NEK3-208ENST00000618534 SP6Q3SY56 376 aa17.82■□□□□ 0.44
NEK3-208ENST00000618534 RTL6Q6ICC9 239 aa17.82■□□□□ 0.44
NEK3-208ENST00000618534 OR6C1Q96RD1 312 aa17.82■□□□□ 0.44
NEK3-208ENST00000618534 NELFAQ9H3P2 528 aa17.82■□□□□ 0.44
NEK3-208ENST00000618534 RPS10P5Q9NQ39 176 aa17.82■□□□□ 0.44
NEK3-208ENST00000618534 NME2P1O60361 137 aa17.81■□□□□ 0.44
NEK3-208ENST00000618534 ACAA1P09110 424 aaPredicted RBP17.81■□□□□ 0.44
NEK3-208ENST00000618534 OR5H8P0DN80 308 aa17.81■□□□□ 0.44
NEK3-208ENST00000618534 LBX1P52954 281 aa17.81■□□□□ 0.44
NEK3-208ENST00000618534 RRADP55042 308 aa17.81■□□□□ 0.44
NEK3-208ENST00000618534 SLC35A1P78382 337 aa17.81■□□□□ 0.44
NEK3-208ENST00000618534 MIDNQ504T8 468 aa17.81■□□□□ 0.44
NEK3-208ENST00000618534 ZNF574Q6ZN55 896 aaPredicted RBP17.81■□□□□ 0.44
NEK3-208ENST00000618534 UBAC2Q8NBM4 344 aa17.81■□□□□ 0.44
NEK3-208ENST00000618534 TOMM40LQ969M1 308 aa17.81■□□□□ 0.44
NEK3-208ENST00000618534 HIST1H2BAQ96A08 127 aa17.81■□□□□ 0.44
NEK3-208ENST00000618534 RASL10BQ96S79 203 aa17.81■□□□□ 0.44
NEK3-208ENST00000618534 FAAP24Q9BTP7 215 aa17.81■□□□□ 0.44
NEK3-208ENST00000618534 GPR173Q9NS66 373 aa17.81■□□□□ 0.44
NEK3-208ENST00000618534 LOC102725191A0A1B0GVB3 256 aa17.81■□□□□ 0.44
NEK3-208ENST00000618534 TSPAN15O95858 294 aa17.81■□□□□ 0.44
NEK3-208ENST00000618534 MBPP02686 304 aaPredicted RBP17.81■□□□□ 0.44
NEK3-208ENST00000618534 PTAFRP25105 342 aa17.81■□□□□ 0.44
NEK3-208ENST00000618534 PAX6P26367 422 aa17.81■□□□□ 0.44
NEK3-208ENST00000618534 PIGPP57054 158 aa17.81■□□□□ 0.44
NEK3-208ENST00000618534 SLC22A8Q8TCC7 542 aa17.81■□□□□ 0.44
NEK3-208ENST00000618534 NABP1Q96AH0 204 aa17.81■□□□□ 0.44
NEK3-208ENST00000618534 SPACA9Q96E40 222 aaPredicted RBP17.81■□□□□ 0.44
NEK3-208ENST00000618534 EGLN1Q9GZT9 426 aa17.81■□□□□ 0.44
NEK3-208ENST00000618534 DECR2Q9NUI1 292 aa17.81■□□□□ 0.44
NEK3-208ENST00000618534 STARD10Q9Y365 291 aa17.81■□□□□ 0.44
NEK3-208ENST00000618534 EML6Q6ZMW3 1958 aa17.8■□□□□ 0.44
NEK3-208ENST00000618534 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.8■□□□□ 0.44
NEK3-208ENST00000618534 IGHV3-15A0A0B4J1V0 119 aa17.8■□□□□ 0.44
NEK3-208ENST00000618534 ANGPTL7O43827 346 aa17.8■□□□□ 0.44
NEK3-208ENST00000618534 SCRG1O75711 98 aa17.8■□□□□ 0.44
NEK3-208ENST00000618534 ZNF133P52736 654 aaPredicted RBP17.8■□□□□ 0.44
NEK3-208ENST00000618534 FADS6Q8N9I5 356 aa17.8■□□□□ 0.44
NEK3-208ENST00000618534 PLEKHA2Q9HB19 425 aa17.8■□□□□ 0.44
NEK3-208ENST00000618534 FAM212BQ9NTI7 297 aaPredicted RBP17.8■□□□□ 0.44
NEK3-208ENST00000618534 CA14Q9ULX7 337 aa17.8■□□□□ 0.44
NEK3-208ENST00000618534 PRSS44E7EML9 344 aa17.8■□□□□ 0.44
NEK3-208ENST00000618534 OPRM1P35372 400 aa17.8■□□□□ 0.44
NEK3-208ENST00000618534 S100A12P80511 92 aa17.8■□□□□ 0.44
NEK3-208ENST00000618534 SNAI3Q3KNW1 292 aa17.8■□□□□ 0.44
NEK3-208ENST00000618534 ZNF385AQ96PM9 386 aaKnown RBP17.8■□□□□ 0.44
NEK3-208ENST00000618534 NAA11Q9BSU3 229 aaPredicted RBP17.8■□□□□ 0.44
NEK3-208ENST00000618534 WFDC1Q9HC57 220 aa17.8■□□□□ 0.44
NEK3-208ENST00000618534 AK3Q9UIJ7 227 aa17.8■□□□□ 0.44
NEK3-208ENST00000618534 LINC01387J3KSC0 135 aa17.79■□□□□ 0.44
NEK3-208ENST00000618534 M0R135 149 aa17.79■□□□□ 0.44
NEK3-208ENST00000618534 HOXB1P14653 301 aaPredicted RBP17.79■□□□□ 0.44
NEK3-208ENST00000618534 SNCAP37840 140 aa17.79■□□□□ 0.44
NEK3-208ENST00000618534 ZNF616Q08AN1 781 aa17.79■□□□□ 0.44
NEK3-208ENST00000618534 CHAF1BQ13112 559 aa17.79■□□□□ 0.44
NEK3-208ENST00000618534 TAF9Q16594 264 aa17.79■□□□□ 0.44
NEK3-208ENST00000618534 AWAT1Q58HT5 328 aa17.79■□□□□ 0.44
NEK3-208ENST00000618534 C10orf128Q5T292 105 aa17.79■□□□□ 0.44
NEK3-208ENST00000618534 ZNF799Q96GE5 643 aa17.79■□□□□ 0.44
NEK3-208ENST00000618534 ARV1Q9H2C2 271 aa17.79■□□□□ 0.44
NEK3-208ENST00000618534 C1orf196B1AJZ1 125 aa17.79■□□□□ 0.44
NEK3-208ENST00000618534 SPRY1O43609 319 aaPredicted RBP17.79■□□□□ 0.44
NEK3-208ENST00000618534 DKK1O94907 266 aa17.79■□□□□ 0.44
NEK3-208ENST00000618534 DIRAS3O95661 229 aa17.79■□□□□ 0.44
NEK3-208ENST00000618534 OR5AC1P0C628 307 aa17.79■□□□□ 0.44
NEK3-208ENST00000618534 EIF1P41567 113 aaKnown RBP17.79■□□□□ 0.44
NEK3-208ENST00000618534 MTCP1P56278 107 aa17.79■□□□□ 0.44
NEK3-208ENST00000618534 TGIF1Q15583 401 aa17.79■□□□□ 0.44
NEK3-208ENST00000618534 TSPO2Q5TGU0 170 aa17.79■□□□□ 0.44
NEK3-208ENST00000618534 SPSB2Q99619 263 aa17.79■□□□□ 0.44
NEK3-208ENST00000618534 RBM24Q9BX46 236 aaKnown RBP17.79■□□□□ 0.44
NEK3-208ENST00000618534 E5RGE8 158 aa17.78■□□□□ 0.44
NEK3-208ENST00000618534 MASP2O00187 686 aa17.78■□□□□ 0.44
NEK3-208ENST00000618534 XRCC2O43543 280 aa17.78■□□□□ 0.44
NEK3-208ENST00000618534 SNRNP70P08621 437 aaKnown RBP17.78■□□□□ 0.44
NEK3-208ENST00000618534 CBR1P16152 277 aa17.78■□□□□ 0.44
NEK3-208ENST00000618534 OTX1P32242 354 aaPredicted RBP17.78■□□□□ 0.44
NEK3-208ENST00000618534 FHITP49789 147 aa17.78■□□□□ 0.44
NEK3-208ENST00000618534 TMEM187Q14656 261 aa17.78■□□□□ 0.44
NEK3-208ENST00000618534 Q6ZSR3 168 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms