RNA–Protein interactions for RNA: ENST00000616352.4

ACACA-238, Transcript of acetyl-CoA carboxylase alpha, human

TSL 1 (best)

Gene ACACA, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACACA-238	ENST00000616352	ZNF701	Q9NV72	531 aa	Predicted RBP	19.43	■□□□□ 0.7
ACACA-238	ENST00000616352		A6NLC8	198 aa		19.42	■□□□□ 0.7
ACACA-238	ENST00000616352	AIP	O00170	330 aa		19.42	■□□□□ 0.7
ACACA-238	ENST00000616352	SYNGR1	O43759	233 aa		19.42	■□□□□ 0.7
ACACA-238	ENST00000616352	RHBDL1	O75783	438 aa		19.42	■□□□□ 0.7
ACACA-238	ENST00000616352	PLAT	P00750	562 aa		19.42	■□□□□ 0.7
ACACA-238	ENST00000616352	PTGFR	P43088	359 aa		19.42	■□□□□ 0.7
ACACA-238	ENST00000616352	SLC25A26	Q70HW3	274 aa		19.42	■□□□□ 0.7
ACACA-238	ENST00000616352	C1QL2	Q7Z5L3	287 aa		19.42	■□□□□ 0.7
ACACA-238	ENST00000616352	PNLDC1	Q8NA58	520 aa	Known RBP	19.42	■□□□□ 0.7
ACACA-238	ENST00000616352	OR6M1	Q8NGM8	313 aa		19.42	■□□□□ 0.7
ACACA-238	ENST00000616352	FN3KRP	Q9HA64	309 aa		19.42	■□□□□ 0.7
ACACA-238	ENST00000616352	PPP1R3C	Q9UQK1	317 aa		19.42	■□□□□ 0.7
ACACA-238	ENST00000616352	SPRY1	O43609	319 aa	Predicted RBP	19.41	■□□□□ 0.7
ACACA-238	ENST00000616352	NDUFS7	O75251	213 aa		19.41	■□□□□ 0.7
ACACA-238	ENST00000616352	PAX1	P15863	534 aa		19.41	■□□□□ 0.7
ACACA-238	ENST00000616352	HNRNPA0	Q13151	305 aa	Known RBP	19.41	■□□□□ 0.7
ACACA-238	ENST00000616352	ASCL4	Q6XD76	172 aa		19.41	■□□□□ 0.7
ACACA-238	ENST00000616352	TGIF2LY	Q8IUE0	185 aa		19.41	■□□□□ 0.7
ACACA-238	ENST00000616352	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	19.41	■□□□□ 0.7
ACACA-238	ENST00000616352	DYNC2LI1	Q8TCX1	351 aa		19.41	■□□□□ 0.7
ACACA-238	ENST00000616352	TNFAIP8L1	Q8WVP5	186 aa		19.41	■□□□□ 0.7
ACACA-238	ENST00000616352	SLC25A28	Q96A46	364 aa		19.41	■□□□□ 0.7
ACACA-238	ENST00000616352	BARHL1	Q9BZE3	327 aa		19.41	■□□□□ 0.7
ACACA-238	ENST00000616352	PLGRKT	Q9HBL7	147 aa		19.41	■□□□□ 0.7
ACACA-238	ENST00000616352	C1orf123	Q9NWV4	160 aa		19.41	■□□□□ 0.7
ACACA-238	ENST00000616352	PLEKHA6	Q9Y2H5	1048 aa		19.41	■□□□□ 0.7
ACACA-238	ENST00000616352	IGKV1-12	A0A0C4DH73	117 aa		19.4	■□□□□ 0.7
ACACA-238	ENST00000616352	F12	P00748	615 aa	Predicted RBP	19.4	■□□□□ 0.7
ACACA-238	ENST00000616352	IGKV1D-12	P01611	117 aa		19.4	■□□□□ 0.7
ACACA-238	ENST00000616352	HTR2C	P28335	458 aa		19.4	■□□□□ 0.7
ACACA-238	ENST00000616352	CFHR2	P36980	270 aa		19.4	■□□□□ 0.7
ACACA-238	ENST00000616352	HES5	Q5TA89	166 aa		19.4	■□□□□ 0.7
ACACA-238	ENST00000616352	SAXO1	Q8IYX7	474 aa		19.4	■□□□□ 0.7
ACACA-238	ENST00000616352	PXT1	Q8NFP0	134 aa		19.4	■□□□□ 0.7
ACACA-238	ENST00000616352	C1orf147	Q96MC9	270 aa	Predicted RBP	19.4	■□□□□ 0.7
ACACA-238	ENST00000616352	MTCH1	Q9NZJ7	389 aa		19.4	■□□□□ 0.7
ACACA-238	ENST00000616352	CACNG2	Q9Y698	323 aa		19.4	■□□□□ 0.7
ACACA-238	ENST00000616352	PDZD2	O15018	2839 aa		19.4	■□□□□ 0.7
ACACA-238	ENST00000616352	IGHV1-69-2	A0A0G2JMI3	117 aa		19.4	■□□□□ 0.7
ACACA-238	ENST00000616352	ANGPTL7	O43827	346 aa		19.4	■□□□□ 0.7
ACACA-238	ENST00000616352	LY6H	O94772	140 aa		19.4	■□□□□ 0.7
ACACA-238	ENST00000616352	ACAA1	P09110	424 aa	Predicted RBP	19.4	■□□□□ 0.7
ACACA-238	ENST00000616352	TMEM225B	P0DP42	221 aa		19.4	■□□□□ 0.7
ACACA-238	ENST00000616352	RBMX	P38159	391 aa	Known RBP	19.4	■□□□□ 0.7
ACACA-238	ENST00000616352	EFNA4	P52798	201 aa		19.4	■□□□□ 0.7
ACACA-238	ENST00000616352	MRPS11	P82912	194 aa	Known RBP	19.4	■□□□□ 0.7
ACACA-238	ENST00000616352	ZNF181	Q2M3W8	571 aa		19.4	■□□□□ 0.7
ACACA-238	ENST00000616352	MKX	Q8IYA7	352 aa		19.4	■□□□□ 0.7
ACACA-238	ENST00000616352	OR51F2	Q8NH61	342 aa		19.4	■□□□□ 0.7
ACACA-238	ENST00000616352	STEAP1	Q9UHE8	339 aa		19.4	■□□□□ 0.7
ACACA-238	ENST00000616352	MRPS28	Q9Y2Q9	187 aa	Known RBP	19.4	■□□□□ 0.7
ACACA-238	ENST00000616352	POLDIP2	Q9Y2S7	368 aa		19.4	■□□□□ 0.7
ACACA-238	ENST00000616352	PGA5	P0DJD9	388 aa		19.39	■□□□□ 0.69
ACACA-238	ENST00000616352	SLC2A2	P11168	524 aa	Predicted RBP	19.39	■□□□□ 0.69
ACACA-238	ENST00000616352	CROCCP3	Q8IVE0	287 aa		19.39	■□□□□ 0.69
ACACA-238	ENST00000616352	OR10Z1	Q8NGY1	313 aa		19.39	■□□□□ 0.69
ACACA-238	ENST00000616352	YIPF5	Q969M3	257 aa		19.39	■□□□□ 0.69
ACACA-238	ENST00000616352	TREM2	Q9NZC2	230 aa		19.39	■□□□□ 0.69
ACACA-238	ENST00000616352	DAPK2	Q9UIK4	370 aa		19.39	■□□□□ 0.69
ACACA-238	ENST00000616352	VPS13C	Q709C8	3753 aa		19.39	■□□□□ 0.69
ACACA-238	ENST00000616352	CSMD1	Q96PZ7	3565 aa		19.38	■□□□□ 0.69
ACACA-238	ENST00000616352	hCG_1807616	A0A1W2PRN6	198 aa		19.38	■□□□□ 0.69
ACACA-238	ENST00000616352	CDC14B	O60729	498 aa		19.38	■□□□□ 0.69
ACACA-238	ENST00000616352	NOS1AP	O75052	506 aa	Predicted RBP	19.38	■□□□□ 0.69
ACACA-238	ENST00000616352	LHB	P01229	141 aa		19.38	■□□□□ 0.69
ACACA-238	ENST00000616352	CLDN12	P56749	244 aa		19.38	■□□□□ 0.69
ACACA-238	ENST00000616352	RAB11B	Q15907	218 aa		19.38	■□□□□ 0.69
ACACA-238	ENST00000616352	AWAT2	Q6E213	333 aa		19.38	■□□□□ 0.69
ACACA-238	ENST00000616352	GLIPR1L1	Q6UWM5	242 aa		19.38	■□□□□ 0.69
ACACA-238	ENST00000616352	ZNF671	Q8TAW3	534 aa		19.38	■□□□□ 0.69
ACACA-238	ENST00000616352	TBC1D15	Q8TC07	691 aa		19.38	■□□□□ 0.69
ACACA-238	ENST00000616352	SLAMF9	Q96A28	289 aa		19.38	■□□□□ 0.69
ACACA-238	ENST00000616352	DCAF16	Q9NXF7	216 aa		19.38	■□□□□ 0.69
ACACA-238	ENST00000616352	RP2	O75695	350 aa		19.37	■□□□□ 0.69
ACACA-238	ENST00000616352	KDM4B	O94953	1096 aa		19.37	■□□□□ 0.69
ACACA-238	ENST00000616352	IGHV4-39	P01824	125 aa		19.37	■□□□□ 0.69
ACACA-238	ENST00000616352	DAO	P14920	347 aa		19.37	■□□□□ 0.69
ACACA-238	ENST00000616352	COL8A2	P25067	703 aa		19.37	■□□□□ 0.69
ACACA-238	ENST00000616352	RORC	P51449	518 aa		19.37	■□□□□ 0.69
ACACA-238	ENST00000616352	ERVK11-1	P61568	191 aa		19.37	■□□□□ 0.69
ACACA-238	ENST00000616352	GCSAM	Q8N6F7	178 aa		19.37	■□□□□ 0.69
ACACA-238	ENST00000616352	POC1A	Q8NBT0	407 aa		19.37	■□□□□ 0.69
ACACA-238	ENST00000616352	LRRC29	Q8WV35	223 aa		19.37	■□□□□ 0.69
ACACA-238	ENST00000616352	RDH5	Q92781	318 aa		19.37	■□□□□ 0.69
ACACA-238	ENST00000616352	NRIP2	Q9BQI9	281 aa		19.37	■□□□□ 0.69
ACACA-238	ENST00000616352	SMURF1	Q9HCE7	757 aa		19.37	■□□□□ 0.69
ACACA-238	ENST00000616352	IL36G	Q9NZH8	169 aa		19.37	■□□□□ 0.69
ACACA-238	ENST00000616352	EDAR	Q9UNE0	448 aa		19.37	■□□□□ 0.69
ACACA-238	ENST00000616352	FLNB	O75369	2602 aa	Known RBP	19.37	■□□□□ 0.69
ACACA-238	ENST00000616352	SRRM5	B3KS81	715 aa		19.36	■□□□□ 0.69
ACACA-238	ENST00000616352		F8VVB4	439 aa		19.36	■□□□□ 0.69
ACACA-238	ENST00000616352		F8VWA3	439 aa		19.36	■□□□□ 0.69
ACACA-238	ENST00000616352	LYNX1	G3V0Z9	82 aa		19.36	■□□□□ 0.69
ACACA-238	ENST00000616352	IFNL4	K9M1U5	179 aa		19.36	■□□□□ 0.69
ACACA-238	ENST00000616352	TMEM127	O75204	238 aa		19.36	■□□□□ 0.69
ACACA-238	ENST00000616352	CYB5A	P00167	134 aa		19.36	■□□□□ 0.69
ACACA-238	ENST00000616352	LYNX1	P0DP58	116 aa		19.36	■□□□□ 0.69
ACACA-238	ENST00000616352	ZNF182	P17025	639 aa	Predicted RBP	19.36	■□□□□ 0.69
ACACA-238	ENST00000616352	NPBWR2	P48146	333 aa		19.36	■□□□□ 0.69

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms