RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 ONECUT2O95948 504 aa11.61□□□□□ -0.55
MSH6-214ENST00000616033 TUBG1P23258 451 aa11.61□□□□□ -0.55
MSH6-214ENST00000616033 RPS23P62266 143 aaKnown RBP11.61□□□□□ -0.55
MSH6-214ENST00000616033 TRA2AQ13595 282 aaKnown RBP eCLIP11.61□□□□□ -0.556e-7■■■■■ 32.2
MSH6-214ENST00000616033 C1orf100Q5SVJ3 147 aa11.61□□□□□ -0.55
MSH6-214ENST00000616033 MTIF3Q9H2K0 278 aaKnown RBP11.61□□□□□ -0.55
MSH6-214ENST00000616033 RNF122Q9H9V4 155 aa11.61□□□□□ -0.55
MSH6-214ENST00000616033 PARP11Q9NR21 331 aa11.61□□□□□ -0.55
MSH6-214ENST00000616033 C5orf63A6NC05 138 aa11.61□□□□□ -0.55
MSH6-214ENST00000616033 ANGPTL7O43827 346 aa11.61□□□□□ -0.55
MSH6-214ENST00000616033 SGCBQ16585 318 aa11.61□□□□□ -0.55
MSH6-214ENST00000616033 TCEAL6Q6IPX3 200 aa11.61□□□□□ -0.55
MSH6-214ENST00000616033 OR56B1Q8NGI3 324 aa11.61□□□□□ -0.55
MSH6-214ENST00000616033 ZNF775Q96BV0 537 aaPredicted RBP11.61□□□□□ -0.55
MSH6-214ENST00000616033 WFDC1Q9HC57 220 aa11.61□□□□□ -0.55
MSH6-214ENST00000616033 FAM221BA6H8Z2 402 aa11.61□□□□□ -0.55
MSH6-214ENST00000616033 PPP1R2P9O14990 202 aa11.61□□□□□ -0.55
MSH6-214ENST00000616033 IGHV2-5P01817 119 aa11.61□□□□□ -0.55
MSH6-214ENST00000616033 PGCP20142 388 aa11.61□□□□□ -0.55
MSH6-214ENST00000616033 NKX6-1P78426 367 aaPredicted RBP11.61□□□□□ -0.55
MSH6-214ENST00000616033 MFAP5Q13361 173 aa11.61□□□□□ -0.55
MSH6-214ENST00000616033 NSDHLQ15738 373 aa11.61□□□□□ -0.55
MSH6-214ENST00000616033 PNLIPRP3Q17RR3 467 aa11.61□□□□□ -0.55
MSH6-214ENST00000616033 PHF19Q5T6S3 580 aa11.61□□□□□ -0.55
MSH6-214ENST00000616033 AADACL3Q5VUY0 350 aa11.61□□□□□ -0.55
MSH6-214ENST00000616033 TMEM123Q8N131 208 aa11.61□□□□□ -0.55
MSH6-214ENST00000616033 TMEM156Q8N614 296 aa11.61□□□□□ -0.55
MSH6-214ENST00000616033 ELOVL1Q9BW60 279 aa11.61□□□□□ -0.55
MSH6-214ENST00000616033 PLEKHJ1Q9NW61 149 aa11.61□□□□□ -0.55
MSH6-214ENST00000616033 C1orf123Q9NWV4 160 aa11.61□□□□□ -0.55
MSH6-214ENST00000616033 LIPGQ9Y5X9 500 aa11.61□□□□□ -0.55
MSH6-214ENST00000616033 TRBV6-7A0A0A0MS04 114 aa11.6□□□□□ -0.55
MSH6-214ENST00000616033 BORCS7-ASMTA0A0B4J1R7 106 aa11.6□□□□□ -0.55
MSH6-214ENST00000616033 IFITM10A6NMD0 228 aa11.6□□□□□ -0.55
MSH6-214ENST00000616033 BPNT1O95861 308 aa11.6□□□□□ -0.55
MSH6-214ENST00000616033 CXCL1P09341 107 aa11.6□□□□□ -0.55
MSH6-214ENST00000616033 CHATP28329 748 aa11.6□□□□□ -0.55
MSH6-214ENST00000616033 GFERP55789 205 aa11.6□□□□□ -0.55
MSH6-214ENST00000616033 ROM1Q03395 351 aa11.6□□□□□ -0.55
MSH6-214ENST00000616033 FAHD2BQ6P2I3 314 aaPredicted RBP11.6□□□□□ -0.55
MSH6-214ENST00000616033 C19orf47Q8N9M1 422 aaKnown RBP11.6□□□□□ -0.55
MSH6-214ENST00000616033 DTWD2Q8NBA8 298 aa11.6□□□□□ -0.55
MSH6-214ENST00000616033 OR2AJ1Q8NGZ0 328 aa11.6□□□□□ -0.55
MSH6-214ENST00000616033 STT3BQ8TCJ2 826 aa11.6□□□□□ -0.55
MSH6-214ENST00000616033 FAHD2AQ96GK7 314 aa11.6□□□□□ -0.55
MSH6-214ENST00000616033 VN1R1Q9GZP7 353 aa11.6□□□□□ -0.55
MSH6-214ENST00000616033 OR10A2Q9H208 303 aa11.6□□□□□ -0.55
MSH6-214ENST00000616033 OPA3Q9H6K4 179 aa11.6□□□□□ -0.55
MSH6-214ENST00000616033 ZNF581Q9P0T4 197 aa11.6□□□□□ -0.55
MSH6-214ENST00000616033 ZNF319Q9P2F9 582 aa11.6□□□□□ -0.55
MSH6-214ENST00000616033 PLPP3O14495 311 aa11.6□□□□□ -0.55
MSH6-214ENST00000616033 PLRG1O43660 514 aaKnown RBP11.6□□□□□ -0.55
MSH6-214ENST00000616033 FOLR2P14207 255 aa11.6□□□□□ -0.55
MSH6-214ENST00000616033 FPR2P25090 351 aa11.6□□□□□ -0.55
MSH6-214ENST00000616033 PIGPP57054 158 aa11.6□□□□□ -0.55
MSH6-214ENST00000616033 OR2T2Q6IF00 324 aa11.6□□□□□ -0.55
MSH6-214ENST00000616033 THNSL2Q86YJ6 484 aa11.6□□□□□ -0.55
MSH6-214ENST00000616033 LRRC18Q8N456 261 aa11.6□□□□□ -0.55
MSH6-214ENST00000616033 ARL6IP6Q8N6S5 226 aa11.6□□□□□ -0.55
MSH6-214ENST00000616033 URM1Q9BTM9 101 aaKnown RBP11.6□□□□□ -0.55
MSH6-214ENST00000616033 SLC35B3Q9H1N7 401 aa11.6□□□□□ -0.55
MSH6-214ENST00000616033 TRIOBPQ9H2D6 2365 aa11.6□□□□□ -0.55
MSH6-214ENST00000616033 LOC390937A0A1W2PQ73 354 aa11.6□□□□□ -0.55
MSH6-214ENST00000616033 A8MVM7 634 aa11.6□□□□□ -0.55
MSH6-214ENST00000616033 CST7O76096 145 aa11.6□□□□□ -0.55
MSH6-214ENST00000616033 F10P00742 488 aa11.6□□□□□ -0.55
MSH6-214ENST00000616033 RPL29P47914 159 aaKnown RBP11.6□□□□□ -0.55
MSH6-214ENST00000616033 ZNF121P58317 390 aaPredicted RBP11.6□□□□□ -0.55
MSH6-214ENST00000616033 SLC26A5P58743 744 aa11.6□□□□□ -0.55
MSH6-214ENST00000616033 BPIFB3P59826 476 aa11.6□□□□□ -0.55
MSH6-214ENST00000616033 COTL1Q14019 142 aa11.6□□□□□ -0.55
MSH6-214ENST00000616033 PARM1Q6UWI2 310 aa11.6□□□□□ -0.55
MSH6-214ENST00000616033 FBXW12Q6X9E4 464 aa11.6□□□□□ -0.55
MSH6-214ENST00000616033 KCNG3Q8TAE7 436 aa11.6□□□□□ -0.55
MSH6-214ENST00000616033 CPNE4Q96A23 557 aaPredicted RBP11.6□□□□□ -0.55
MSH6-214ENST00000616033 PADI1Q9ULC6 663 aa11.6□□□□□ -0.55
MSH6-214ENST00000616033 RALGAPA1Q6GYQ0 2036 aa11.6□□□□□ -0.55
MSH6-214ENST00000616033 FRYLO94915 3013 aa11.59□□□□□ -0.55
MSH6-214ENST00000616033 DHRS7CA6NNS2 312 aa11.59□□□□□ -0.55
MSH6-214ENST00000616033 TMEM150CB9EJG8 249 aa11.59□□□□□ -0.55
MSH6-214ENST00000616033 TCF21O43680 179 aa11.59□□□□□ -0.55
MSH6-214ENST00000616033 OR5AC1P0C628 307 aa11.59□□□□□ -0.55
MSH6-214ENST00000616033 FCGR2AP12318 317 aa11.59□□□□□ -0.55
MSH6-214ENST00000616033 SLC35A1P78382 337 aa11.59□□□□□ -0.55
MSH6-214ENST00000616033 TAF9Q16594 264 aa11.59□□□□□ -0.55
MSH6-214ENST00000616033 KHDC3LQ587J8 217 aa11.59□□□□□ -0.55
MSH6-214ENST00000616033 PTPMT1Q8WUK0 201 aaPredicted RBP11.59□□□□□ -0.55
MSH6-214ENST00000616033 MRPL37Q9BZE1 423 aaKnown RBP11.59□□□□□ -0.55
MSH6-214ENST00000616033 FAM24AA6NFZ4 105 aa11.59□□□□□ -0.55
MSH6-214ENST00000616033 HNRNPA1P09651 372 aaKnown RBP eCLIP11.59□□□□□ -0.55
MSH6-214ENST00000616033 FSTP19883 344 aa11.59□□□□□ -0.55
MSH6-214ENST00000616033 SFTPDP35247 375 aa11.59□□□□□ -0.55
MSH6-214ENST00000616033 FOXK1P85037 733 aa11.59□□□□□ -0.55
MSH6-214ENST00000616033 FDX2Q6P4F2 183 aa11.59□□□□□ -0.55
MSH6-214ENST00000616033 Q7L0L9 218 aa11.59□□□□□ -0.55
MSH6-214ENST00000616033 CARFQ8N187 725 aa11.59□□□□□ -0.55
MSH6-214ENST00000616033 OR52M1Q8NGK5 317 aa11.59□□□□□ -0.55
MSH6-214ENST00000616033 OR11L1Q8NGX0 322 aa11.59□□□□□ -0.55
MSH6-214ENST00000616033 OR2G3Q8NGZ4 309 aa11.59□□□□□ -0.55
MSH6-214ENST00000616033 ZNF519Q8TB69 540 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms