RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 A0A1W2PPZ6 126 aa16.83■□□□□ 0.28
SPAST-203ENST00000615843 F12P00748 615 aaPredicted RBP16.83■□□□□ 0.28
SPAST-203ENST00000615843 ARR3P36575 388 aa16.83■□□□□ 0.28
SPAST-203ENST00000615843 CAPZBP47756 277 aa16.83■□□□□ 0.28
SPAST-203ENST00000615843 PPP2CBP62714 309 aa16.83■□□□□ 0.28
SPAST-203ENST00000615843 PPP2CAP67775 309 aa16.83■□□□□ 0.28
SPAST-203ENST00000615843 BET1LQ9NYM9 111 aa16.83■□□□□ 0.28
SPAST-203ENST00000615843 CSN1S1P47710 185 aa16.83■□□□□ 0.28
SPAST-203ENST00000615843 FGF8P55075 233 aaPredicted RBP16.83■□□□□ 0.28
SPAST-203ENST00000615843 ZNF117Q03924 483 aa16.83■□□□□ 0.28
SPAST-203ENST00000615843 LPAL2Q16609 132 aa16.83■□□□□ 0.28
SPAST-203ENST00000615843 OR2T10Q8NGZ9 312 aa16.83■□□□□ 0.28
SPAST-203ENST00000615843 ROBO4Q8WZ75 1007 aa16.83■□□□□ 0.28
SPAST-203ENST00000615843 NAT8Q9UHE5 227 aa16.83■□□□□ 0.28
SPAST-203ENST00000615843 ALS2Q96Q42 1657 aa16.83■□□□□ 0.28
SPAST-203ENST00000615843 M0QZK8 103 aa16.83■□□□□ 0.28
SPAST-203ENST00000615843 GALR2O43603 387 aaPredicted RBP16.83■□□□□ 0.28
SPAST-203ENST00000615843 GGCTO75223 188 aaKnown RBP16.83■□□□□ 0.28
SPAST-203ENST00000615843 NTN1O95631 604 aa16.83■□□□□ 0.28
SPAST-203ENST00000615843 ZBTB25P24278 435 aa16.83■□□□□ 0.28
SPAST-203ENST00000615843 FRRS1LQ9P0K9 344 aa16.83■□□□□ 0.28
SPAST-203ENST00000615843 LSM2Q9Y333 95 aaKnown RBP16.83■□□□□ 0.28
SPAST-203ENST00000615843 NAT2P11245 290 aa16.82■□□□□ 0.28
SPAST-203ENST00000615843 TM4SF4P48230 202 aa16.82■□□□□ 0.28
SPAST-203ENST00000615843 PARP11Q9NR21 331 aa16.82■□□□□ 0.28
SPAST-203ENST00000615843 MRPS18AQ9NVS2 196 aaKnown RBP16.82■□□□□ 0.28
SPAST-203ENST00000615843 KRASP01116 189 aa16.82■□□□□ 0.28
SPAST-203ENST00000615843 P2RY1P47900 373 aa16.82■□□□□ 0.28
SPAST-203ENST00000615843 CD81P60033 236 aa16.82■□□□□ 0.28
SPAST-203ENST00000615843 GUCA2BQ16661 112 aa16.82■□□□□ 0.28
SPAST-203ENST00000615843 SCCPDHQ8NBX0 429 aa16.82■□□□□ 0.28
SPAST-203ENST00000615843 RPS4Y2Q8TD47 263 aa16.82■□□□□ 0.28
SPAST-203ENST00000615843 CLDN23Q96B33 292 aa16.82■□□□□ 0.28
SPAST-203ENST00000615843 B4DEV8 164 aa16.82■□□□□ 0.28
SPAST-203ENST00000615843 CTSDP07339 412 aaPredicted RBP16.82■□□□□ 0.28
SPAST-203ENST00000615843 PDCD1Q15116 288 aa16.82■□□□□ 0.28
SPAST-203ENST00000615843 SURF2Q15527 256 aaPredicted RBP16.82■□□□□ 0.28
SPAST-203ENST00000615843 RNASEKQ6P5S7 137 aaKnown RBP16.82■□□□□ 0.28
SPAST-203ENST00000615843 CACFD1Q9UGQ2 172 aa16.82■□□□□ 0.28
SPAST-203ENST00000615843 CXCL13O43927 109 aa16.82■□□□□ 0.28
SPAST-203ENST00000615843 CLN3Q13286 438 aa16.82■□□□□ 0.28
SPAST-203ENST00000615843 RABEPKQ7Z6M1 372 aa16.82■□□□□ 0.28
SPAST-203ENST00000615843 LINC01555Q8NAE3 123 aa16.82■□□□□ 0.28
SPAST-203ENST00000615843 OR10A7Q8NGE5 316 aa16.82■□□□□ 0.28
SPAST-203ENST00000615843 S1PR3Q99500 378 aa16.82■□□□□ 0.28
SPAST-203ENST00000615843 SIRT7Q9NRC8 400 aa16.82■□□□□ 0.28
SPAST-203ENST00000615843 CD27P26842 260 aa16.81■□□□□ 0.28
SPAST-203ENST00000615843 LBHQ53QV2 105 aaPredicted RBP16.81■□□□□ 0.28
SPAST-203ENST00000615843 C8orf44Q96CB5 159 aa16.81■□□□□ 0.28
SPAST-203ENST00000615843 ZNF107Q9UII5 783 aaPredicted RBP16.81■□□□□ 0.28
SPAST-203ENST00000615843 FAM74A7A6NL05 159 aa16.81■□□□□ 0.28
SPAST-203ENST00000615843 SPINK4O60575 86 aa16.81■□□□□ 0.28
SPAST-203ENST00000615843 ADH4P08319 380 aa16.81■□□□□ 0.28
SPAST-203ENST00000615843 RPS16P62249 146 aaKnown RBP16.81■□□□□ 0.28
SPAST-203ENST00000615843 PRICKLE4Q2TBC4 344 aa16.81■□□□□ 0.28
SPAST-203ENST00000615843 FAM74A3Q4VXF1 159 aa16.81■□□□□ 0.28
SPAST-203ENST00000615843 ZNF355PQ9NSJ1 428 aa16.81■□□□□ 0.28
SPAST-203ENST00000615843 NRAPQ86VF7 1730 aa16.81■□□□□ 0.28
SPAST-203ENST00000615843 MFSD2BA6NFX1 497 aa16.81■□□□□ 0.28
SPAST-203ENST00000615843 C19orf35Q6ZS72 473 aa16.81■□□□□ 0.28
SPAST-203ENST00000615843 LINC00518Q8N0U6 118 aa16.81■□□□□ 0.28
SPAST-203ENST00000615843 SLC25A22Q9H936 323 aa16.81■□□□□ 0.28
SPAST-203ENST00000615843 METAP1P53582 386 aa16.81■□□□□ 0.28
SPAST-203ENST00000615843 INSM1Q01101 510 aaPredicted RBP16.81■□□□□ 0.28
SPAST-203ENST00000615843 RTL8BQ17RB0 113 aa16.81■□□□□ 0.28
SPAST-203ENST00000615843 MYPOPQ86VE0 399 aaPredicted RBP16.81■□□□□ 0.28
SPAST-203ENST00000615843 NEU3Q9UQ49 428 aa16.81■□□□□ 0.28
SPAST-203ENST00000615843 RER1O15258 196 aa16.8■□□□□ 0.28
SPAST-203ENST00000615843 DHRS3O75911 302 aa16.8■□□□□ 0.28
SPAST-203ENST00000615843 POLR2GP62487 172 aaKnown RBP eCLIP16.8■□□□□ 0.28
SPAST-203ENST00000615843 ZNF154Q13106 437 aa16.8■□□□□ 0.28
SPAST-203ENST00000615843 Q6ZN92 141 aa16.8■□□□□ 0.28
SPAST-203ENST00000615843 FBLIM1Q8WUP2 373 aa16.8■□□□□ 0.28
SPAST-203ENST00000615843 FBXO17Q96EF6 278 aa16.8■□□□□ 0.28
SPAST-203ENST00000615843 COMMD5Q9GZQ3 224 aa16.8■□□□□ 0.28
SPAST-203ENST00000615843 TMEM9BQ9NQ34 198 aa16.8■□□□□ 0.28
SPAST-203ENST00000615843 DOCK2Q92608 1830 aa16.8■□□□□ 0.28
SPAST-203ENST00000615843 PIAS2O75928 621 aa16.8■□□□□ 0.28
SPAST-203ENST00000615843 ACAA1P09110 424 aaPredicted RBP16.8■□□□□ 0.28
SPAST-203ENST00000615843 ERHP84090 104 aaKnown RBP16.8■□□□□ 0.28
SPAST-203ENST00000615843 IL24Q13007 206 aa16.8■□□□□ 0.28
SPAST-203ENST00000615843 OR10G3Q8NGC4 313 aa16.8■□□□□ 0.28
SPAST-203ENST00000615843 RGP1Q92546 391 aaPredicted RBP16.8■□□□□ 0.28
SPAST-203ENST00000615843 GALMQ96C23 342 aa16.8■□□□□ 0.28
SPAST-203ENST00000615843 NEIL1Q96FI4 390 aaPredicted RBP16.8■□□□□ 0.28
SPAST-203ENST00000615843 TRIB1Q96RU8 372 aa16.8■□□□□ 0.28
SPAST-203ENST00000615843 PLRG1O43660 514 aaKnown RBP16.8■□□□□ 0.28
SPAST-203ENST00000615843 CTLA4P16410 223 aa16.8■□□□□ 0.28
SPAST-203ENST00000615843 FUT7Q11130 342 aa16.8■□□□□ 0.28
SPAST-203ENST00000615843 ZNF770Q6IQ21 691 aaPredicted RBP16.8■□□□□ 0.28
SPAST-203ENST00000615843 PUSL1Q8N0Z8 303 aaKnown RBP16.8■□□□□ 0.28
SPAST-203ENST00000615843 EDARADDQ8WWZ3 215 aa16.8■□□□□ 0.28
SPAST-203ENST00000615843 MSL2Q9HCI7 577 aa16.8■□□□□ 0.28
SPAST-203ENST00000615843 TTC3P53804 2025 aa16.8■□□□□ 0.28
SPAST-203ENST00000615843 KNL1Q8NG31 2342 aa16.8■□□□□ 0.28
SPAST-203ENST00000615843 FAM166BA8MTA8 275 aa16.8■□□□□ 0.28
SPAST-203ENST00000615843 NPIPB8E9PQR5 432 aa16.8■□□□□ 0.28
SPAST-203ENST00000615843 H3BQ15 152 aa16.8■□□□□ 0.28
SPAST-203ENST00000615843 TTRP02766 147 aa16.8■□□□□ 0.28
SPAST-203ENST00000615843 NDUFB7P17568 137 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms