RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 NIPSNAP1Q9BPW8 284 aa8.39□□□□□ -1.07
COL12A1-211ENST00000615798 GKN1Q9NS71 199 aa8.39□□□□□ -1.07
COL12A1-211ENST00000615798 ASGR2P07307 311 aa8.39□□□□□ -1.07
COL12A1-211ENST00000615798 POLR2GP62487 172 aaKnown RBP eCLIP8.39□□□□□ -1.07
COL12A1-211ENST00000615798 OPALINQ96PE5 141 aa8.39□□□□□ -1.07
COL12A1-211ENST00000615798 HYAL3O43820 417 aaPredicted RBP8.39□□□□□ -1.07
COL12A1-211ENST00000615798 ALOX12BO75342 701 aa8.39□□□□□ -1.07
COL12A1-211ENST00000615798 MOSPD3O75425 235 aa8.39□□□□□ -1.07
COL12A1-211ENST00000615798 SHC1P29353 583 aa8.39□□□□□ -1.07
COL12A1-211ENST00000615798 SHBQ15464 509 aa8.39□□□□□ -1.07
COL12A1-211ENST00000615798 ASPGQ86U10 573 aa8.39□□□□□ -1.07
COL12A1-211ENST00000615798 TRBV11-1A0A0K0K1C0 115 aa8.39□□□□□ -1.07
COL12A1-211ENST00000615798 HCRTR1O43613 425 aa8.39□□□□□ -1.07
COL12A1-211ENST00000615798 RNFT1Q5M7Z0 435 aa8.39□□□□□ -1.07
COL12A1-211ENST00000615798 RGP1Q92546 391 aaPredicted RBP8.39□□□□□ -1.07
COL12A1-211ENST00000615798 RAB1BQ9H0U4 201 aa8.39□□□□□ -1.07
COL12A1-211ENST00000615798 SAP30LQ9HAJ7 183 aa8.39□□□□□ -1.07
COL12A1-211ENST00000615798 HLA-DRB1P01911 266 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 CAMPP49913 170 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 SNAI3Q3KNW1 292 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 NPSR1Q6W5P4 371 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 RABEPKQ7Z6M1 372 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 SIRT6Q8N6T7 355 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 GALR2O43603 387 aaPredicted RBP8.38□□□□□ -1.07
COL12A1-211ENST00000615798 LGALS3P17931 250 aaKnown RBP8.38□□□□□ -1.07
COL12A1-211ENST00000615798 Q6ZVL8 140 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 EDA2RQ9HAV5 297 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 DHCR7Q9UBM7 475 aaKnown RBP8.38□□□□□ -1.07
COL12A1-211ENST00000615798 SEMG2Q02383 582 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 OR8I2Q8N0Y5 310 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 ACPTQ9BZG2 426 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 MOKQ9UQ07 419 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.38□□□□□ -1.07
COL12A1-211ENST00000615798 TAF1P21675 1872 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 ZNF785A8K8V0 405 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 PRAMEF26H0Y7S4 382 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 TAPBPO15533 448 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 PPP1R1AQ13522 171 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 PRELID3AQ96N28 172 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 TMEM147Q9BVK8 224 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 PLA2G12AQ9BZM1 189 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 DNAJC4Q9NNZ3 241 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 AKIP1Q9NQ31 210 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 GSN-AS1Q9NRJ2 163 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 F11RQ9Y624 299 aaKnown RBP8.38□□□□□ -1.07
COL12A1-211ENST00000615798 TRAV21A0A0B4J279 112 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 GGACTQ9BVM4 153 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 HSPB2A8KAH6 182 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 IGLV3-25P01717 112 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 ARG1P05089 322 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 SP1P08047 785 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 HYAL2Q12891 473 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 HSPB2Q16082 182 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 SELENOHQ8IZQ5 122 aaKnown RBP8.38□□□□□ -1.07
COL12A1-211ENST00000615798 CDRT4Q8N9R6 151 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 SLC6A18Q96N87 628 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 GNB1P62873 340 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 EIF3IQ13347 325 aaKnown RBP8.38□□□□□ -1.07
COL12A1-211ENST00000615798 PODNL1Q6PEZ8 512 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 OTOP2Q7RTS6 562 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 RPS4Y2Q8TD47 263 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 TRGC1P0CF51 173 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 IER3P46695 156 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 CLDN12P56749 244 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 PIP5KL1Q5T9C9 394 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 ZNF324BQ6AW86 544 aaPredicted RBP8.38□□□□□ -1.07
COL12A1-211ENST00000615798 WBP2NLQ6ICG8 309 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 CPPED1Q9BRF8 314 aaPredicted RBP8.38□□□□□ -1.07
COL12A1-211ENST00000615798 TMEM204Q9BSN7 226 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 SLC17A9Q9BYT1 436 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 HMX2A2RU54 273 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 ELNP15502 786 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 CCL14Q16627 93 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 TRAT1Q6PIZ9 186 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 WDR76Q9H967 626 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 SPATA6Q9NWH7 488 aaPredicted RBP8.38□□□□□ -1.07
COL12A1-211ENST00000615798 WNT16Q9UBV4 365 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 ARFGEF1Q9Y6D6 1849 aa8.38□□□□□ -1.07
COL12A1-211ENST00000615798 KBTBD11-OT1A0A1B0GTJ5 212 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 RBFOX2O43251 390 aaKnown RBP eCLIP8.37□□□□□ -1.07
COL12A1-211ENST00000615798 CD74P04233 296 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 TEAD1P28347 426 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 DGCR2P98153 550 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 ZXDAP98168 799 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 ZXDBP98169 803 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 POU3F1Q03052 451 aaPredicted RBP8.37□□□□□ -1.07
COL12A1-211ENST00000615798 GCSAMLQ5JQS6 135 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 PRSS8Q16651 343 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 ZNF628Q5EBL2 1059 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 SPANXDQ9BXN6 97 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 ATF1P18846 271 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 FPGSQ05932 587 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 MAVSQ7Z434 540 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 OR4F17Q8NGA8 305 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 OR10S1Q8NGN2 331 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 NTSR1P30989 418 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 PMP22Q01453 160 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 RPS26P11Q5JNZ5 115 aaPredicted RBP8.37□□□□□ -1.07
COL12A1-211ENST00000615798 PLXDC2Q6UX71 529 aa8.37□□□□□ -1.07
COL12A1-211ENST00000615798 TMEM40Q8WWA1 233 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms