RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 C17orf78Q8N4C9 275 aa8.31□□□□□ -1.08
CLTCL1-208ENST00000615606 OR1S2Q8NGQ3 325 aa8.31□□□□□ -1.08
CLTCL1-208ENST00000615606 SLC25A40Q8TBP6 338 aa8.31□□□□□ -1.08
CLTCL1-208ENST00000615606 PIK3IP1Q96FE7 263 aa8.31□□□□□ -1.08
CLTCL1-208ENST00000615606 SLC35E1Q96K37 410 aa8.31□□□□□ -1.08
CLTCL1-208ENST00000615606 OPN3Q9H1Y3 402 aaPredicted RBP8.31□□□□□ -1.08
CLTCL1-208ENST00000615606 AUNIPQ9H7T9 357 aa8.31□□□□□ -1.08
CLTCL1-208ENST00000615606 BIN3Q9NQY0 253 aa8.31□□□□□ -1.08
CLTCL1-208ENST00000615606 IGLV3-12A0A075B6K2 115 aa8.31□□□□□ -1.08
CLTCL1-208ENST00000615606 RAB27BO00194 218 aa8.31□□□□□ -1.08
CLTCL1-208ENST00000615606 NUPL2O15504 423 aaKnown RBP8.31□□□□□ -1.08
CLTCL1-208ENST00000615606 COX6B1P14854 86 aa8.31□□□□□ -1.08
CLTCL1-208ENST00000615606 RAB4BP61018 213 aa8.31□□□□□ -1.08
CLTCL1-208ENST00000615606 TLE1Q04724 770 aa8.31□□□□□ -1.08
CLTCL1-208ENST00000615606 OR52N4Q8NGI2 321 aa8.31□□□□□ -1.08
CLTCL1-208ENST00000615606 BORCS7Q96B45 105 aa8.31□□□□□ -1.08
CLTCL1-208ENST00000615606 GPX7Q96SL4 187 aaPredicted RBP8.31□□□□□ -1.08
CLTCL1-208ENST00000615606 SSX3Q99909 188 aa8.31□□□□□ -1.08
CLTCL1-208ENST00000615606 SLC7A10Q9NS82 523 aa8.31□□□□□ -1.08
CLTCL1-208ENST00000615606 A0A1W2PNV4 684 aa8.31□□□□□ -1.08
CLTCL1-208ENST00000615606 LGALS8O00214 317 aa8.31□□□□□ -1.08
CLTCL1-208ENST00000615606 FABP7O15540 132 aa8.31□□□□□ -1.08
CLTCL1-208ENST00000615606 TNFSF12O43508 249 aa8.31□□□□□ -1.08
CLTCL1-208ENST00000615606 RPS2P15880 293 aaKnown RBP8.31□□□□□ -1.08
CLTCL1-208ENST00000615606 ADRA2CP18825 462 aa8.31□□□□□ -1.08
CLTCL1-208ENST00000615606 ZBTB25P24278 435 aa8.31□□□□□ -1.08
CLTCL1-208ENST00000615606 MMP16P51512 607 aa8.31□□□□□ -1.08
CLTCL1-208ENST00000615606 FCN2Q15485 313 aa8.31□□□□□ -1.08
CLTCL1-208ENST00000615606 OR2B11Q5JQS5 317 aa8.31□□□□□ -1.08
CLTCL1-208ENST00000615606 SLC38A6Q8IZM9 456 aa8.31□□□□□ -1.08
CLTCL1-208ENST00000615606 CELF2-AS1Q8N7Q2 184 aa8.31□□□□□ -1.08
CLTCL1-208ENST00000615606 MED30Q96HR3 178 aa8.31□□□□□ -1.08
CLTCL1-208ENST00000615606 SFXN3Q9BWM7 321 aa8.31□□□□□ -1.08
CLTCL1-208ENST00000615606 OR6C3Q9NZP0 311 aa8.31□□□□□ -1.08
CLTCL1-208ENST00000615606 RNF7Q9UBF6 113 aa8.31□□□□□ -1.08
CLTCL1-208ENST00000615606 ANK1P16157 1881 aa8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 TMEM272A0A1B0GTI8 110 aa8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 ZNF724A8MTY0 619 aa8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 C3orf80F5H4A9 247 aa8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 C1QCP02747 245 aa8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 CRHP06850 196 aa8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 MMP15P51511 669 aa8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 HNF4GQ14541 408 aa8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 SSX9Q7RTT3 188 aa8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 C20orf196Q8IYI0 205 aa8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 OR8B3Q8NGG8 313 aa8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 OR8B2Q96RD0 313 aa8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 ARPC5LQ9BPX5 153 aa8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 ZNF251Q9BRH9 671 aa8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 TMEM210A6NLX4 147 aa8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 OR3A4PP47883 348 aa8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 LIMS1P48059 325 aa8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 RAB7AP51149 207 aa8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 ERHP84090 104 aaKnown RBP8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 CTF1Q16619 201 aa8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 GPA33Q99795 319 aa8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 TUBG2Q9NRH3 451 aa8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 TINAGQ9UJW2 476 aa8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 RNF150Q9ULK6 438 aa8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 POM121CA8CG34 1229 aa8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 C9orf172C9J069 976 aa8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 J3QT63 122 aa8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 GPR31O00270 319 aa8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 PPP3CBP16298 524 aa8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 SSX1Q16384 188 aa8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 TMEM268Q5VZI3 342 aa8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 XAF1Q6GPH4 301 aa8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 Q6ZNX1 250 aa8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 MOB3BQ86TA1 216 aa8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 NANPQ8TBE9 248 aa8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 RTN4IP1Q8WWV3 396 aaPredicted RBP8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 ARHGAP5-AS1Q96IT6 56 aa8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 FAM212BQ9NTI7 297 aaPredicted RBP8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 KCNE5Q9UJ90 142 aa8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 AMMECR1Q9Y4X0 333 aaPredicted RBP8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 CYTIPO60759 359 aa8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 SCAF4O95104 1147 aaKnown RBP8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 IL11P20809 199 aa8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 LSM11P83369 360 aaKnown RBP eCLIP8.3□□□□□ -1.085e-12■■■■■ 52.1
CLTCL1-208ENST00000615606 IGFBP7Q16270 282 aa8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 OR5A2Q8NGI9 324 aa8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 RPEQ96AT9 228 aa8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 IMMP1LQ96LU5 166 aa8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 HRH4Q9H3N8 390 aa8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 CNTD2Q9H8S5 307 aa8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 FRRS1LQ9P0K9 344 aa8.3□□□□□ -1.08
CLTCL1-208ENST00000615606 GREB1Q4ZG55 1949 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 A8MXE2 369 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 PRSS44E7EML9 344 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 FBXO24O75426 580 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 THBS3P49746 956 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 PRRX1P54821 245 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 PIGPP57054 158 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 GGTLC2Q14390 218 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 COL19A1Q14993 1142 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 VMA21Q3ZAQ7 101 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 RIPPLY2Q5TAB7 128 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 ALKAL2Q6UX46 152 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 MOGAT3Q86VF5 341 aa8.29□□□□□ -1.08
CLTCL1-208ENST00000615606 MARCH1Q8TCQ1 289 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms