RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, human

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-223	ENST00000611614	SRY	Q05066	204 aa		12.13	□□□□□ -0.47
COPS7B-223	ENST00000611614	PPP1R1A	Q13522	171 aa		12.13	□□□□□ -0.47
COPS7B-223	ENST00000611614	MICB	Q29980	383 aa		12.13	□□□□□ -0.47
COPS7B-223	ENST00000611614	HFE	Q30201	348 aa		12.13	□□□□□ -0.47
COPS7B-223	ENST00000611614	PHYHD1	Q5SRE7	291 aa		12.13	□□□□□ -0.47
COPS7B-223	ENST00000611614	DHRS7B	Q6IAN0	325 aa	Predicted RBP	12.13	□□□□□ -0.47
COPS7B-223	ENST00000611614	FOXL2NB	Q6ZUU3	175 aa		12.13	□□□□□ -0.47
COPS7B-223	ENST00000611614	OR9K2	Q8NGE7	335 aa		12.13	□□□□□ -0.47
COPS7B-223	ENST00000611614	OR14K1	Q8NGZ2	314 aa		12.13	□□□□□ -0.47
COPS7B-223	ENST00000611614	KCNG3	Q8TAE7	436 aa		12.13	□□□□□ -0.47
COPS7B-223	ENST00000611614	C1orf147	Q96MC9	270 aa	Predicted RBP	12.13	□□□□□ -0.47
COPS7B-223	ENST00000611614	NICN1	Q9BSH3	213 aa		12.13	□□□□□ -0.47
COPS7B-223	ENST00000611614	SRXN1	Q9BYN0	137 aa		12.13	□□□□□ -0.47
COPS7B-223	ENST00000611614	ACKR4	Q9NPB9	350 aa		12.13	□□□□□ -0.47
COPS7B-223	ENST00000611614	TMEM100	Q9NV29	134 aa		12.13	□□□□□ -0.47
COPS7B-223	ENST00000611614	ASF1B	Q9NVP2	202 aa		12.13	□□□□□ -0.47
COPS7B-223	ENST00000611614	TRBV6-7	A0A0A0MS04	114 aa		12.12	□□□□□ -0.47
COPS7B-223	ENST00000611614	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	12.12	□□□□□ -0.47
COPS7B-223	ENST00000611614	SSX5	O60225	188 aa		12.12	□□□□□ -0.47
COPS7B-223	ENST00000611614	CEACAM4	O75871	244 aa		12.12	□□□□□ -0.47
COPS7B-223	ENST00000611614	DUS4L	O95620	317 aa	Known RBP	12.12	□□□□□ -0.47
COPS7B-223	ENST00000611614	HCK	P08631	526 aa		12.12	□□□□□ -0.47
COPS7B-223	ENST00000611614	OR3A4P	P47883	348 aa		12.12	□□□□□ -0.47
COPS7B-223	ENST00000611614	SUCLG1	P53597	346 aa	Known RBP	12.12	□□□□□ -0.47
COPS7B-223	ENST00000611614	IL13RA1	P78552	427 aa		12.12	□□□□□ -0.47
COPS7B-223	ENST00000611614	GFOD2	Q3B7J2	385 aa		12.12	□□□□□ -0.47
COPS7B-223	ENST00000611614	OR52W1	Q6IF63	320 aa		12.12	□□□□□ -0.47
COPS7B-223	ENST00000611614	SLC30A7	Q8NEW0	376 aa		12.12	□□□□□ -0.47
COPS7B-223	ENST00000611614	GJC3	Q8NFK1	279 aa		12.12	□□□□□ -0.47
COPS7B-223	ENST00000611614	PIK3IP1	Q96FE7	263 aa		12.12	□□□□□ -0.47
COPS7B-223	ENST00000611614	PGAM5	Q96HS1	289 aa		12.12	□□□□□ -0.47
COPS7B-223	ENST00000611614	ZNF385A	Q96PM9	386 aa	Known RBP	12.12	□□□□□ -0.47
COPS7B-223	ENST00000611614	CST11	Q9H112	138 aa		12.12	□□□□□ -0.47
COPS7B-223	ENST00000611614	ZNF629	Q9UEG4	869 aa	Predicted RBP	12.12	□□□□□ -0.47
COPS7B-223	ENST00000611614	CCS	O14618	274 aa		12.12	□□□□□ -0.47
COPS7B-223	ENST00000611614	MPIG6B	O95866	241 aa		12.12	□□□□□ -0.47
COPS7B-223	ENST00000611614	ACTL6A	O96019	429 aa		12.12	□□□□□ -0.47
COPS7B-223	ENST00000611614	CD79A	P11912	226 aa		12.12	□□□□□ -0.47
COPS7B-223	ENST00000611614	ENDOG	Q14249	297 aa	Known RBP	12.12	□□□□□ -0.47
COPS7B-223	ENST00000611614	LRRC37A5P	Q49AS3	106 aa		12.12	□□□□□ -0.47
COPS7B-223	ENST00000611614	SLC22A6	Q4U2R8	563 aa		12.12	□□□□□ -0.47
COPS7B-223	ENST00000611614	TMEM123	Q8N131	208 aa		12.12	□□□□□ -0.47
COPS7B-223	ENST00000611614	OR5AP2	Q8NGF4	316 aa		12.12	□□□□□ -0.47
COPS7B-223	ENST00000611614	SEC22A	Q96IW7	307 aa		12.12	□□□□□ -0.47
COPS7B-223	ENST00000611614	NMES1	Q9C002	83 aa		12.12	□□□□□ -0.47
COPS7B-223	ENST00000611614	MBD2	Q9UBB5	411 aa		12.12	□□□□□ -0.47
COPS7B-223	ENST00000611614		A0A0A6YYD4	124 aa		12.11	□□□□□ -0.47
COPS7B-223	ENST00000611614	SMAD9	O15198	467 aa	Known RBP	12.11	□□□□□ -0.47
COPS7B-223	ENST00000611614	RRP8	O43159	456 aa	Known RBP	12.11	□□□□□ -0.47
COPS7B-223	ENST00000611614	DHH	O43323	396 aa		12.11	□□□□□ -0.47
COPS7B-223	ENST00000611614	CDC14B	O60729	498 aa		12.11	□□□□□ -0.47
COPS7B-223	ENST00000611614	SYNGR4	O95473	234 aa		12.11	□□□□□ -0.47
COPS7B-223	ENST00000611614	IGLV3-1	P01715	115 aa		12.11	□□□□□ -0.47
COPS7B-223	ENST00000611614	CRH	P06850	196 aa		12.11	□□□□□ -0.47
COPS7B-223	ENST00000611614	GSTP1	P09211	210 aa	Known RBP	12.11	□□□□□ -0.47
COPS7B-223	ENST00000611614	PSMB6	P28072	239 aa		12.11	□□□□□ -0.47
COPS7B-223	ENST00000611614	HRH1	P35367	487 aa		12.11	□□□□□ -0.47
COPS7B-223	ENST00000611614	S100A12	P80511	92 aa		12.11	□□□□□ -0.47
COPS7B-223	ENST00000611614	FAM189A2	Q15884	450 aa		12.11	□□□□□ -0.47
COPS7B-223	ENST00000611614	IL34	Q6ZMJ4	242 aa		12.11	□□□□□ -0.47
COPS7B-223	ENST00000611614	PUSL1	Q8N0Z8	303 aa	Known RBP	12.11	□□□□□ -0.47
COPS7B-223	ENST00000611614	TMEM104	Q8NE00	496 aa		12.11	□□□□□ -0.47
COPS7B-223	ENST00000611614	SSC4D	Q8WTU2	575 aa		12.11	□□□□□ -0.47
COPS7B-223	ENST00000611614	RNF141	Q8WVD5	230 aa		12.11	□□□□□ -0.47
COPS7B-223	ENST00000611614	NABP1	Q96AH0	204 aa		12.11	□□□□□ -0.47
COPS7B-223	ENST00000611614	MRGPRF	Q96AM1	343 aa		12.11	□□□□□ -0.47
COPS7B-223	ENST00000611614	INTS12	Q96CB8	462 aa	Known RBP	12.11	□□□□□ -0.47
COPS7B-223	ENST00000611614	ADGRG7	Q96K78	797 aa		12.11	□□□□□ -0.47
COPS7B-223	ENST00000611614	DEFB127	Q9H1M4	99 aa		12.11	□□□□□ -0.47
COPS7B-223	ENST00000611614	CSAG2	Q9Y5P2	127 aa		12.11	□□□□□ -0.47
COPS7B-223	ENST00000611614	ZNF98	A6NK75	572 aa		12.11	□□□□□ -0.47
COPS7B-223	ENST00000611614		E9PLN8	166 aa		12.11	□□□□□ -0.47
COPS7B-223	ENST00000611614	SNAPIN	O95295	136 aa		12.11	□□□□□ -0.47
COPS7B-223	ENST00000611614	PVALB	P20472	110 aa	Predicted RBP	12.11	□□□□□ -0.47
COPS7B-223	ENST00000611614	LHX2	P50458	406 aa		12.11	□□□□□ -0.47
COPS7B-223	ENST00000611614	HIST1H3A	P68431	136 aa		12.11	□□□□□ -0.47
COPS7B-223	ENST00000611614	ATXN7L3	Q14CW9	347 aa	Predicted RBP	12.11	□□□□□ -0.47
COPS7B-223	ENST00000611614	BEX5	Q5H9J7	111 aa		12.11	□□□□□ -0.47
COPS7B-223	ENST00000611614	HIST2H3PS2	Q5TEC6	136 aa		12.11	□□□□□ -0.47
COPS7B-223	ENST00000611614	HIST2H3A	Q71DI3	136 aa		12.11	□□□□□ -0.47
COPS7B-223	ENST00000611614	LDLRAD3	Q86YD5	345 aa		12.11	□□□□□ -0.47
COPS7B-223	ENST00000611614	LYZL4	Q96KX0	146 aa		12.11	□□□□□ -0.47
COPS7B-223	ENST00000611614	CNTNAP3B	Q96NU0	1288 aa		12.11	□□□□□ -0.47
COPS7B-223	ENST00000611614	GPER1	Q99527	375 aa		12.11	□□□□□ -0.47
COPS7B-223	ENST00000611614	TMEM59	Q9BXS4	323 aa		12.11	□□□□□ -0.47
COPS7B-223	ENST00000611614	PRRG4	Q9BZD6	226 aa		12.11	□□□□□ -0.47
COPS7B-223	ENST00000611614	CHMP1A	Q9HD42	196 aa	Predicted RBP	12.11	□□□□□ -0.47
COPS7B-223	ENST00000611614	BIN3	Q9NQY0	253 aa		12.11	□□□□□ -0.47
COPS7B-223	ENST00000611614	MMP26	Q9NRE1	261 aa		12.11	□□□□□ -0.47
COPS7B-223	ENST00000611614	MCTS1	Q9ULC4	181 aa	Known RBP	12.11	□□□□□ -0.47
COPS7B-223	ENST00000611614	TRGV5	A0A0B4J1U4	118 aa		12.1	□□□□□ -0.47
COPS7B-223	ENST00000611614	IGKV1-9	A0A0C4DH69	117 aa		12.1	□□□□□ -0.47
COPS7B-223	ENST00000611614	PQLC2L	A1A4F0	135 aa		12.1	□□□□□ -0.47
COPS7B-223	ENST00000611614	SIGLEC5	O15389	551 aa		12.1	□□□□□ -0.47
COPS7B-223	ENST00000611614	IFNA6	P05013	189 aa		12.1	□□□□□ -0.47
COPS7B-223	ENST00000611614	ZNF708	P17019	499 aa		12.1	□□□□□ -0.47
COPS7B-223	ENST00000611614	DRAM2	Q6UX65	266 aa		12.1	□□□□□ -0.47
COPS7B-223	ENST00000611614	RTN4RL2	Q86UN3	420 aa		12.1	□□□□□ -0.47
COPS7B-223	ENST00000611614	BAP18	Q8IXM2	172 aa		12.1	□□□□□ -0.47
COPS7B-223	ENST00000611614	ROBO4	Q8WZ75	1007 aa		12.1	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms