RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 CST4P01036 141 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 ARG1P05089 322 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 CRYBA1P05813 215 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 SLC25A4P12235 298 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 CTRB1P17538 263 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 TCN2P20062 427 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 HOXC12P31275 282 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 NPBWR1P48145 328 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 RAB13P51153 203 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 PCBD1P61457 104 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 LY6G6FQ5SQ64 297 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 SHEQ5VZ18 495 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 CTRB2Q6GPI1 263 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 OR2A2Q6IF42 318 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 RHBDD2Q6NTF9 364 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 DRAM2Q6UX65 266 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 LINC00696Q6ZRV3 163 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 FAM24BQ8N5W8 94 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 CPT1CQ8TCG5 803 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 PP6455Q8WZ26 134 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 AQP3Q92482 292 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 FBXO17Q96EF6 278 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 OR10C1Q96KK4 312 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 PFDN5Q99471 154 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 SLC25A31Q9H0C2 315 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 NELFAQ9H3P2 528 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 CYB5R1Q9UHQ9 305 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 MMP24Q9Y5R2 645 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 LAMA2P24043 3122 aaKnown RBP6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 ZNF724A8MTY0 619 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 MASP2O00187 686 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 VAMP5O95183 116 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 CELA2AP08217 269 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 NQO2P16083 231 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 THBS4P35443 961 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 DUSP3P51452 185 aaPredicted RBP6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 TSC22D1Q15714 1073 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 GUK1Q16774 197 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 EIF2S3LQ2VIR3 472 aaKnown RBP6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 ANKRD55Q3KP44 614 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 AADACL3Q5VUY0 350 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 FAHD2BQ6P2I3 314 aaPredicted RBP6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 TMEM123Q8N131 208 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 ZSCAN4Q8NAM6 433 aaPredicted RBP6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 FAHD2AQ96GK7 314 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 CLCC1Q96S66 551 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 RSRP1Q9BUV0 290 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 B4GALT7Q9UBV7 327 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 OR14J1Q9UGF5 321 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 SIT1Q9Y3P8 196 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 PHF3Q92576 2039 aaKnown RBP6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 SMCO3A2RU48 225 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 FIGNL2A6NMB9 653 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 FAM166BA8MTA8 275 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 C1QL1O75973 258 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 WISP1O95388 367 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 H2AFB1P0C5Y9 115 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 SPP1P10451 314 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 CCL2P13500 99 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 MUC1P15941 1255 aaPredicted RBP6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 ZNF32P17041 273 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 ALDH3B1P43353 468 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 TLE1Q04724 770 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 KIAA0141Q14154 515 aaPredicted RBP6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 ZNF345Q14585 488 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 WIPI1Q5MNZ9 446 aaPredicted RBP6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 IL34Q6ZMJ4 242 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 SLC16A13Q7RTY0 426 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 DPPA2Q7Z7J5 298 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 OSR2Q8N2R0 312 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 IL22RA1Q8N6P7 574 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 ZNF709Q8N972 641 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 OR6X1Q8NH79 312 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 SNIP1Q8TAD8 396 aaKnown RBP6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 NINJ1Q92982 152 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 C5orf66Q9H5L9 145 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 FAM206AQ9NX38 181 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 GHRLQ9UBU3 117 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 AK3Q9UIJ7 227 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 RCL1Q9Y2P8 373 aaKnown RBP6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 LHFPL6Q9Y693 200 aa6.05□□□□□ -1.44
SYNPO2-206ENST00000610556 DENND4CQ5VZ89 1909 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 FAM24AA6NFZ4 105 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 PRR19A6NJB7 356 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 ANKRD30BLA7E2S9 258 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 LAMTOR5O43504 91 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 OR2C1O95371 312 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 HPNP05981 417 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 HAAOP46952 286 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 RPL23AP62750 156 aaKnown RBP6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 NKX6-1P78426 367 aaPredicted RBP6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 SMAD4Q13485 552 aaKnown RBP6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 ZNF266Q14584 549 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 COL13A1Q5TAT6 717 aaPredicted RBP6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 FDX2Q6P4F2 183 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 LCN15Q6UWW0 184 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 LYZL2Q7Z4W2 148 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 RTN4RL2Q86UN3 420 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 WDR5BQ86VZ2 330 aa6.04□□□□□ -1.44
SYNPO2-206ENST00000610556 HOGA1Q86XE5 327 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms