RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 LOC400499M0QZD8 3231 aa17.89■□□□□ 0.45
SSBP3-216ENST00000610401 CDRT15L2A8MXV6 281 aa17.89■□□□□ 0.45
SSBP3-216ENST00000610401 IFNA21P01568 189 aa17.89■□□□□ 0.45
SSBP3-216ENST00000610401 OR5H8P0DN80 308 aa17.89■□□□□ 0.45
SSBP3-216ENST00000610401 OR52M1Q8NGK5 317 aa17.89■□□□□ 0.45
SSBP3-216ENST00000610401 HIST1H2BAQ96A08 127 aa17.89■□□□□ 0.45
SSBP3-216ENST00000610401 AQP10Q96PS8 301 aa17.89■□□□□ 0.45
SSBP3-216ENST00000610401 ABHD14AQ9BUJ0 271 aa17.89■□□□□ 0.45
SSBP3-216ENST00000610401 CNTNAP3Q9BZ76 1288 aa17.89■□□□□ 0.45
SSBP3-216ENST00000610401 GHRLQ9UBU3 117 aa17.89■□□□□ 0.45
SSBP3-216ENST00000610401 PADI1Q9ULC6 663 aa17.89■□□□□ 0.45
SSBP3-216ENST00000610401 SNAI3Q3KNW1 292 aa17.88■□□□□ 0.45
SSBP3-216ENST00000610401 IL34Q6ZMJ4 242 aa17.88■□□□□ 0.45
SSBP3-216ENST00000610401 PRRX2Q99811 253 aa17.88■□□□□ 0.45
SSBP3-216ENST00000610401 RARRES2Q99969 163 aa17.88■□□□□ 0.45
SSBP3-216ENST00000610401 SMCO4Q9NRQ5 59 aa17.88■□□□□ 0.45
SSBP3-216ENST00000610401 ALKBH4Q9NXW9 302 aa17.88■□□□□ 0.45
SSBP3-216ENST00000610401 ZNF107Q9UII5 783 aaPredicted RBP17.88■□□□□ 0.45
SSBP3-216ENST00000610401 LILRA5A6NI73 299 aa17.88■□□□□ 0.45
SSBP3-216ENST00000610401 ONECUT2O95948 504 aa17.88■□□□□ 0.45
SSBP3-216ENST00000610401 IGHV3-9P01782 118 aa17.88■□□□□ 0.45
SSBP3-216ENST00000610401 IGHMP01871 453 aa17.88■□□□□ 0.45
SSBP3-216ENST00000610401 RPS2P15880 293 aaKnown RBP17.88■□□□□ 0.45
SSBP3-216ENST00000610401 DCDP81605 110 aaKnown RBP17.88■□□□□ 0.45
SSBP3-216ENST00000610401 PIGYQ3MUY2 71 aa17.88■□□□□ 0.45
SSBP3-216ENST00000610401 TMEM217Q8N7C4 229 aa17.88■□□□□ 0.45
SSBP3-216ENST00000610401 OSGIN2Q9Y236 505 aa17.88■□□□□ 0.45
SSBP3-216ENST00000610401 SHISA7A6NL88 538 aa17.87■□□□□ 0.45
SSBP3-216ENST00000610401 ZNF727A8MUV8 499 aa17.87■□□□□ 0.45
SSBP3-216ENST00000610401 TRAF3IP2O43734 574 aaPredicted RBP17.87■□□□□ 0.45
SSBP3-216ENST00000610401 FBP1P09467 338 aa17.87■□□□□ 0.45
SSBP3-216ENST00000610401 PET100P0DJ07 73 aa17.87■□□□□ 0.45
SSBP3-216ENST00000610401 CCR5P51681 352 aa17.87■□□□□ 0.45
SSBP3-216ENST00000610401 COL13A1Q5TAT6 717 aaPredicted RBP17.87■□□□□ 0.45
SSBP3-216ENST00000610401 PLXDC1Q8IUK5 500 aa17.87■□□□□ 0.45
SSBP3-216ENST00000610401 MRPL13Q9BYD1 178 aaKnown RBP17.87■□□□□ 0.45
SSBP3-216ENST00000610401 PARPBPQ9NWS1 579 aa17.87■□□□□ 0.45
SSBP3-216ENST00000610401 C1orf123Q9NWV4 160 aa17.87■□□□□ 0.45
SSBP3-216ENST00000610401 MEMO1Q9Y316 297 aa17.87■□□□□ 0.45
SSBP3-216ENST00000610401 TRBV6-7A0A0A0MS04 114 aa17.87■□□□□ 0.45
SSBP3-216ENST00000610401 DUX1O43812 170 aa17.87■□□□□ 0.45
SSBP3-216ENST00000610401 GALNSP34059 522 aa17.87■□□□□ 0.45
SSBP3-216ENST00000610401 PPP1CCP36873 323 aaKnown RBP17.87■□□□□ 0.45
SSBP3-216ENST00000610401 LTBRP36941 435 aa17.87■□□□□ 0.45
SSBP3-216ENST00000610401 HNRNPKP61978 463 aaKnown RBP eCLIP17.87■□□□□ 0.45
SSBP3-216ENST00000610401 VAX1Q5SQQ9 334 aa17.87■□□□□ 0.45
SSBP3-216ENST00000610401 RAET1LQ5VY80 246 aa17.87■□□□□ 0.45
SSBP3-216ENST00000610401 WFDC1Q9HC57 220 aa17.87■□□□□ 0.45
SSBP3-216ENST00000610401 FABP1P07148 127 aa17.87■□□□□ 0.45
SSBP3-216ENST00000610401 FCGR3AP08637 254 aa17.87■□□□□ 0.45
SSBP3-216ENST00000610401 FOSL2P15408 326 aa17.87■□□□□ 0.45
SSBP3-216ENST00000610401 PTAFRP25105 342 aa17.87■□□□□ 0.45
SSBP3-216ENST00000610401 NAAAQ02083 359 aa17.87■□□□□ 0.45
SSBP3-216ENST00000610401 EIF5AL1Q6IS14 154 aaKnown RBP17.87■□□□□ 0.45
SSBP3-216ENST00000610401 MISPQ8IVT2 679 aa17.87■□□□□ 0.45
SSBP3-216ENST00000610401 MARS2Q96GW9 593 aaKnown RBP17.87■□□□□ 0.45
SSBP3-216ENST00000610401 SMIM8Q96KF7 97 aa17.87■□□□□ 0.45
SSBP3-216ENST00000610401 DSPP15924 2871 aaKnown RBP17.87■□□□□ 0.45
SSBP3-216ENST00000610401 UMAD1C9J7I0 102 aa17.86■□□□□ 0.45
SSBP3-216ENST00000610401 MBPP02686 304 aaPredicted RBP17.86■□□□□ 0.45
SSBP3-216ENST00000610401 GUK1Q16774 197 aa17.86■□□□□ 0.45
SSBP3-216ENST00000610401 ANKRD37Q7Z713 158 aa17.86■□□□□ 0.45
SSBP3-216ENST00000610401 ZNF441Q8N8Z8 693 aa17.86■□□□□ 0.45
SSBP3-216ENST00000610401 ST8SIA1Q92185 356 aa17.86■□□□□ 0.45
SSBP3-216ENST00000610401 LMO7DNF2Z398 122 aa17.86■□□□□ 0.45
SSBP3-216ENST00000610401 H2AFB1P0C5Y9 115 aa17.86■□□□□ 0.45
SSBP3-216ENST00000610401 RSU1Q15404 277 aa17.86■□□□□ 0.45
SSBP3-216ENST00000610401 PLPPR5Q32ZL2 321 aa17.86■□□□□ 0.45
SSBP3-216ENST00000610401 NKAIN1Q4KMZ8 207 aa17.86■□□□□ 0.45
SSBP3-216ENST00000610401 OR14K1Q8NGZ2 314 aa17.86■□□□□ 0.45
SSBP3-216ENST00000610401 CACFD1Q9UGQ2 172 aa17.86■□□□□ 0.45
SSBP3-216ENST00000610401 ZFP62Q8NB50 900 aaPredicted RBP17.85■□□□□ 0.45
SSBP3-216ENST00000610401 CDCA3Q99618 268 aaPredicted RBP17.85■□□□□ 0.45
SSBP3-216ENST00000610401 PIGQQ9BRB3 760 aa17.85■□□□□ 0.45
SSBP3-216ENST00000610401 ZNF700Q9H0M5 742 aa17.85■□□□□ 0.45
SSBP3-216ENST00000610401 LRP4O75096 1905 aa17.85■□□□□ 0.45
SSBP3-216ENST00000610401 TRIOBPQ9H2D6 2365 aa17.85■□□□□ 0.45
SSBP3-216ENST00000610401 CST4P01036 141 aa17.85■□□□□ 0.45
SSBP3-216ENST00000610401 TAS2R46P59540 309 aa17.85■□□□□ 0.45
SSBP3-216ENST00000610401 DOK3Q7L591 496 aa17.85■□□□□ 0.45
SSBP3-216ENST00000610401 C17orf78Q8N4C9 275 aa17.85■□□□□ 0.45
SSBP3-216ENST00000610401 RTN4IP1Q8WWV3 396 aaPredicted RBP17.85■□□□□ 0.45
SSBP3-216ENST00000610401 SHDQ96IW2 340 aa17.85■□□□□ 0.45
SSBP3-216ENST00000610401 SCGB3A2Q96PL1 93 aa17.85■□□□□ 0.45
SSBP3-216ENST00000610401 KLF2Q9Y5W3 355 aaPredicted RBP17.85■□□□□ 0.45
SSBP3-216ENST00000610401 PHF1O43189 567 aaPredicted RBP17.85■□□□□ 0.45
SSBP3-216ENST00000610401 TBPP20226 339 aa17.85■□□□□ 0.45
SSBP3-216ENST00000610401 CCNOP22674 350 aa17.85■□□□□ 0.45
SSBP3-216ENST00000610401 CTAG1AP78358 180 aa17.85■□□□□ 0.45
SSBP3-216ENST00000610401 SPIN3Q5JUX0 258 aa17.85■□□□□ 0.45
SSBP3-216ENST00000610401 FAM209BQ5JX69 171 aa17.85■□□□□ 0.45
SSBP3-216ENST00000610401 C9orf135Q5VTT2 229 aa17.85■□□□□ 0.45
SSBP3-216ENST00000610401 TMEM156Q8N614 296 aa17.85■□□□□ 0.45
SSBP3-216ENST00000610401 EMG1Q92979 244 aaKnown RBP17.85■□□□□ 0.45
SSBP3-216ENST00000610401 ZNF501Q96CX3 271 aaPredicted RBP17.85■□□□□ 0.45
SSBP3-216ENST00000610401 OCSTAMPQ9BR26 566 aa17.85■□□□□ 0.45
SSBP3-216ENST00000610401 GEMIN2O14893 280 aaKnown RBP17.84■□□□□ 0.45
SSBP3-216ENST00000610401 YIF1AO95070 293 aa17.84■□□□□ 0.45
SSBP3-216ENST00000610401 SULT1A2P50226 295 aa17.84■□□□□ 0.45
SSBP3-216ENST00000610401 DVL1P1P54792 670 aaPredicted RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms