RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 SLC7A11Q9UPY5 501 aa13.43□□□□□ -0.26
LSM4-206ENST00000600289 POLDIP2Q9Y2S7 368 aa13.43□□□□□ -0.26
LSM4-206ENST00000600289 EXOSC1Q9Y3B2 195 aaKnown RBP13.43□□□□□ -0.26
LSM4-206ENST00000600289 AUP1Q9Y679 476 aa13.43□□□□□ -0.26
LSM4-206ENST00000600289 A6NIN4 97 aa13.42□□□□□ -0.26
LSM4-206ENST00000600289 TMEM212A6NML5 194 aa13.42□□□□□ -0.26
LSM4-206ENST00000600289 C22orf46C9J442 243 aa13.42□□□□□ -0.26
LSM4-206ENST00000600289 DVL1O14640 695 aa13.42□□□□□ -0.26
LSM4-206ENST00000600289 TMPRSS2O15393 492 aa13.42□□□□□ -0.26
LSM4-206ENST00000600289 AKR7A2O43488 359 aa13.42□□□□□ -0.26
LSM4-206ENST00000600289 ENSAO43768 121 aaKnown RBP13.42□□□□□ -0.26
LSM4-206ENST00000600289 FCN3O75636 299 aa13.42□□□□□ -0.26
LSM4-206ENST00000600289 SERPINA3P01011 423 aa13.42□□□□□ -0.26
LSM4-206ENST00000600289 AMY2BP19961 511 aa13.42□□□□□ -0.26
LSM4-206ENST00000600289 GLRA1P23415 457 aa13.42□□□□□ -0.26
LSM4-206ENST00000600289 HAAOP46952 286 aa13.42□□□□□ -0.26
LSM4-206ENST00000600289 FUT6P51993 359 aa13.42□□□□□ -0.26
LSM4-206ENST00000600289 GBX2P52951 348 aaPredicted RBP13.42□□□□□ -0.26
LSM4-206ENST00000600289 IL24Q13007 206 aa13.42□□□□□ -0.26
LSM4-206ENST00000600289 TUSC1Q2TAM9 212 aa13.42□□□□□ -0.26
LSM4-206ENST00000600289 CCDC58Q4VC31 144 aa13.42□□□□□ -0.26
LSM4-206ENST00000600289 LAIR2Q6ISS4 152 aa13.42□□□□□ -0.26
LSM4-206ENST00000600289 NRG4Q8WWG1 115 aa13.42□□□□□ -0.26
LSM4-206ENST00000600289 NUDT16L1Q9BRJ7 211 aaKnown RBP13.42□□□□□ -0.26
LSM4-206ENST00000600289 NLKQ9UBE8 527 aa13.42□□□□□ -0.26
LSM4-206ENST00000600289 DNAJB11Q9UBS4 358 aa13.42□□□□□ -0.26
LSM4-206ENST00000600289 ZNF222Q9UK12 451 aa13.42□□□□□ -0.26
LSM4-206ENST00000600289 EFCAB10A6NFE3 127 aa13.41□□□□□ -0.26
LSM4-206ENST00000600289 NKX6-3A6NJ46 265 aa13.41□□□□□ -0.26
LSM4-206ENST00000600289 OR2AT4A6NND4 320 aa13.41□□□□□ -0.26
LSM4-206ENST00000600289 ZFPL1O95159 310 aa13.41□□□□□ -0.26
LSM4-206ENST00000600289 LIPFP07098 398 aa13.41□□□□□ -0.26
LSM4-206ENST00000600289 ADRA2CP18825 462 aa13.41□□□□□ -0.26
LSM4-206ENST00000600289 ETV1P50549 477 aa13.41□□□□□ -0.26
LSM4-206ENST00000600289 MED21Q13503 144 aa13.41□□□□□ -0.26
LSM4-206ENST00000600289 DMRTC1Q5HYR2 192 aa13.41□□□□□ -0.26
LSM4-206ENST00000600289 TMPRSS11AQ6ZMR5 421 aa13.41□□□□□ -0.26
LSM4-206ENST00000600289 CALHM1Q8IU99 346 aa13.41□□□□□ -0.26
LSM4-206ENST00000600289 ZNF676Q8N7Q3 588 aa13.41□□□□□ -0.26
LSM4-206ENST00000600289 OR52N1Q8NH53 320 aa13.41□□□□□ -0.26
LSM4-206ENST00000600289 SPSB1Q96BD6 273 aa13.41□□□□□ -0.26
LSM4-206ENST00000600289 TMIGD2Q96BF3 282 aa13.41□□□□□ -0.26
LSM4-206ENST00000600289 UPRTQ96BW1 309 aa13.41□□□□□ -0.26
LSM4-206ENST00000600289 SEH1LQ96EE3 360 aa13.41□□□□□ -0.26
LSM4-206ENST00000600289 ADAT3Q96EY9 351 aaPredicted RBP13.41□□□□□ -0.26
LSM4-206ENST00000600289 TMEM80Q96HE8 168 aa13.41□□□□□ -0.26
LSM4-206ENST00000600289 CCL13Q99616 98 aa13.41□□□□□ -0.26
LSM4-206ENST00000600289 NRIP2Q9BQI9 281 aa13.41□□□□□ -0.26
LSM4-206ENST00000600289 HES4Q9HCC6 221 aa13.41□□□□□ -0.26
LSM4-206ENST00000600289 A0A0A6YYJ9 748 aa13.4□□□□□ -0.26
LSM4-206ENST00000600289 E9PI62 339 aa13.4□□□□□ -0.26
LSM4-206ENST00000600289 SYNGR1O43759 233 aa13.4□□□□□ -0.26
LSM4-206ENST00000600289 ALX3O95076 343 aa13.4□□□□□ -0.26
LSM4-206ENST00000600289 MT-ND2P03891 347 aa13.4□□□□□ -0.26
LSM4-206ENST00000600289 ZNF20P17024 532 aa13.4□□□□□ -0.26
LSM4-206ENST00000600289 MYL12AP19105 171 aa13.4□□□□□ -0.26
LSM4-206ENST00000600289 EPHA1P21709 976 aa13.4□□□□□ -0.26
LSM4-206ENST00000600289 ERVK11-1P61568 191 aa13.4□□□□□ -0.26
LSM4-206ENST00000600289 IL13RA1P78552 427 aa13.4□□□□□ -0.26
LSM4-206ENST00000600289 SMIM21Q3B7S5 101 aa13.4□□□□□ -0.26
LSM4-206ENST00000600289 ARMCX4Q5H9R4 360 aa13.4□□□□□ -0.26
LSM4-206ENST00000600289 RPL22L1Q6P5R6 122 aaKnown RBP13.4□□□□□ -0.26
LSM4-206ENST00000600289 ACP7Q6ZNF0 438 aa13.4□□□□□ -0.26
LSM4-206ENST00000600289 FAM216BQ8N7L0 139 aa13.4□□□□□ -0.26
LSM4-206ENST00000600289 PNLDC1Q8NA58 520 aaKnown RBP13.4□□□□□ -0.26
LSM4-206ENST00000600289 LY6G5BQ8NDX9 201 aa13.4□□□□□ -0.26
LSM4-206ENST00000600289 OR51A4Q8NGJ6 313 aa13.4□□□□□ -0.26
LSM4-206ENST00000600289 OR10AC1Q8NH08 325 aa13.4□□□□□ -0.26
LSM4-206ENST00000600289 OR5AK2Q8NH90 309 aa13.4□□□□□ -0.26
LSM4-206ENST00000600289 GGHQ92820 318 aa13.4□□□□□ -0.26
LSM4-206ENST00000600289 MED30Q96HR3 178 aa13.4□□□□□ -0.26
LSM4-206ENST00000600289 GAFA1Q96PS6 74 aa13.4□□□□□ -0.26
LSM4-206ENST00000600289 COMMD4Q9H0A8 199 aa13.4□□□□□ -0.26
LSM4-206ENST00000600289 VCX3BQ9H321 246 aa13.4□□□□□ -0.26
LSM4-206ENST00000600289 PSORS1C1Q9UIG5 152 aa13.4□□□□□ -0.26
LSM4-206ENST00000600289 IGKV1D-17A0A075B6S4 117 aa13.39□□□□□ -0.27
LSM4-206ENST00000600289 IGKV1-27A0A075B6S5 117 aa13.39□□□□□ -0.27
LSM4-206ENST00000600289 IGKV1-9A0A0C4DH69 117 aa13.39□□□□□ -0.27
LSM4-206ENST00000600289 A0A1B0GW55 424 aa13.39□□□□□ -0.27
LSM4-206ENST00000600289 FAM230AA0A1W2PPH8 454 aa13.39□□□□□ -0.27
LSM4-206ENST00000600289 H3BSH0 61 aa13.39□□□□□ -0.27
LSM4-206ENST00000600289 SIGLEC5O15389 551 aa13.39□□□□□ -0.27
LSM4-206ENST00000600289 NDUFB3O43676 98 aa13.39□□□□□ -0.27
LSM4-206ENST00000600289 TCF21O43680 179 aa13.39□□□□□ -0.27
LSM4-206ENST00000600289 DUX4L2P0CJ85 424 aa13.39□□□□□ -0.27
LSM4-206ENST00000600289 DUX4L3P0CJ86 424 aa13.39□□□□□ -0.27
LSM4-206ENST00000600289 DUX4L4P0CJ87 422 aa13.39□□□□□ -0.27
LSM4-206ENST00000600289 DUX4L5P0CJ88 424 aa13.39□□□□□ -0.27
LSM4-206ENST00000600289 DUX4L6P0CJ89 424 aa13.39□□□□□ -0.27
LSM4-206ENST00000600289 DUX4L7P0CJ90 424 aa13.39□□□□□ -0.27
LSM4-206ENST00000600289 PSG2P11465 335 aa13.39□□□□□ -0.27
LSM4-206ENST00000600289 ATF1P18846 271 aa13.39□□□□□ -0.27
LSM4-206ENST00000600289 PRKACBP22694 351 aa13.39□□□□□ -0.27
LSM4-206ENST00000600289 RBP2P50120 134 aa13.39□□□□□ -0.27
LSM4-206ENST00000600289 AQP4P55087 323 aa13.39□□□□□ -0.27
LSM4-206ENST00000600289 CAV3P56539 151 aa13.39□□□□□ -0.27
LSM4-206ENST00000600289 ST3GAL4Q11206 333 aa13.39□□□□□ -0.27
LSM4-206ENST00000600289 CDK5R1Q15078 307 aa13.39□□□□□ -0.27
LSM4-206ENST00000600289 LRRC10Q5BKY1 277 aa13.39□□□□□ -0.27
LSM4-206ENST00000600289 KLF17Q5JT82 389 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms