RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 HHLA2Q9UM44 414 aa11.61□□□□□ -0.55
SHKBP1-218ENST00000598907 V9GYS6 101 aa11.61□□□□□ -0.55
SHKBP1-218ENST00000598907 DHRS7CA6NNS2 312 aa11.6□□□□□ -0.55
SHKBP1-218ENST00000598907 FOXH1O75593 365 aa11.6□□□□□ -0.55
SHKBP1-218ENST00000598907 DHRS3O75911 302 aa11.6□□□□□ -0.55
SHKBP1-218ENST00000598907 NDUFA7O95182 113 aa11.6□□□□□ -0.55
SHKBP1-218ENST00000598907 CSF1P09603 554 aa11.6□□□□□ -0.55
SHKBP1-218ENST00000598907 RAC2P15153 192 aa11.6□□□□□ -0.55
SHKBP1-218ENST00000598907 CD36P16671 472 aa11.6□□□□□ -0.55
SHKBP1-218ENST00000598907 GALP22466 123 aa11.6□□□□□ -0.55
SHKBP1-218ENST00000598907 PSMA1P25786 263 aaKnown RBP11.6□□□□□ -0.55
SHKBP1-218ENST00000598907 CRYBB2P43320 205 aa11.6□□□□□ -0.55
SHKBP1-218ENST00000598907 RPS23P62266 143 aaKnown RBP11.6□□□□□ -0.55
SHKBP1-218ENST00000598907 ZNF718Q3SXZ3 478 aa11.6□□□□□ -0.55
SHKBP1-218ENST00000598907 TMEM255AQ5JRV8 349 aa11.6□□□□□ -0.55
SHKBP1-218ENST00000598907 RGS7BPQ6MZT1 257 aaPredicted RBP11.6□□□□□ -0.55
SHKBP1-218ENST00000598907 TMEM91Q6ZNR0 172 aa11.6□□□□□ -0.55
SHKBP1-218ENST00000598907 OR51A4Q8NGJ6 313 aa11.6□□□□□ -0.55
SHKBP1-218ENST00000598907 KLF14Q8TD94 323 aaPredicted RBP11.6□□□□□ -0.55
SHKBP1-218ENST00000598907 GPR148Q8TDV2 347 aa11.6□□□□□ -0.55
SHKBP1-218ENST00000598907 GTF3AQ92664 365 aaKnown RBP11.6□□□□□ -0.55
SHKBP1-218ENST00000598907 HAVCR1Q96D42 359 aa11.6□□□□□ -0.55
SHKBP1-218ENST00000598907 IGLV3-9A0A075B6K5 115 aa11.59□□□□□ -0.55
SHKBP1-218ENST00000598907 TRAV40A0A0B4J280 105 aa11.59□□□□□ -0.55
SHKBP1-218ENST00000598907 A0A1B0GVI7 797 aa11.59□□□□□ -0.55
SHKBP1-218ENST00000598907 TRDV1A0A1B0GX56 115 aa11.59□□□□□ -0.55
SHKBP1-218ENST00000598907 C17orf100A8MU93 164 aa11.59□□□□□ -0.55
SHKBP1-218ENST00000598907 TRAPPC2LH3BP13 241 aa11.59□□□□□ -0.55
SHKBP1-218ENST00000598907 SYT7O43581 403 aa11.59□□□□□ -0.55
SHKBP1-218ENST00000598907 ZNF12P17014 697 aa11.59□□□□□ -0.55
SHKBP1-218ENST00000598907 KITLGP21583 273 aa11.59□□□□□ -0.55
SHKBP1-218ENST00000598907 ACKR3P25106 362 aa11.59□□□□□ -0.55
SHKBP1-218ENST00000598907 MPV17P39210 176 aa11.59□□□□□ -0.55
SHKBP1-218ENST00000598907 GSK3AP49840 483 aa11.59□□□□□ -0.55
SHKBP1-218ENST00000598907 FABP5Q01469 135 aa11.59□□□□□ -0.55
SHKBP1-218ENST00000598907 PSG7Q13046 419 aa11.59□□□□□ -0.55
SHKBP1-218ENST00000598907 HNRNPA0Q13151 305 aaKnown RBP11.59□□□□□ -0.55
SHKBP1-218ENST00000598907 HFEQ30201 348 aa11.59□□□□□ -0.55
SHKBP1-218ENST00000598907 Q499Y3 187 aa11.59□□□□□ -0.55
SHKBP1-218ENST00000598907 SPATA46Q5T0L3 261 aa11.59□□□□□ -0.55
SHKBP1-218ENST00000598907 CCBE1Q6UXH8 406 aaPredicted RBP11.59□□□□□ -0.55
SHKBP1-218ENST00000598907 PGAP1Q75T13 922 aa11.59□□□□□ -0.55
SHKBP1-218ENST00000598907 GPR141Q7Z602 305 aa11.59□□□□□ -0.55
SHKBP1-218ENST00000598907 OR13C5Q8NGS8 318 aa11.59□□□□□ -0.55
SHKBP1-218ENST00000598907 CMBLQ96DG6 245 aa11.59□□□□□ -0.55
SHKBP1-218ENST00000598907 SLC30A2Q9BRI3 323 aa11.59□□□□□ -0.55
SHKBP1-218ENST00000598907 TMED9Q9BVK6 235 aa11.59□□□□□ -0.55
SHKBP1-218ENST00000598907 CHIAQ9BZP6 476 aa11.59□□□□□ -0.55
SHKBP1-218ENST00000598907 DECR2Q9NUI1 292 aa11.59□□□□□ -0.55
SHKBP1-218ENST00000598907 TRBV5-7A0A0A0MS05 114 aa11.58□□□□□ -0.56
SHKBP1-218ENST00000598907 MTRF1O75570 445 aaKnown RBP11.58□□□□□ -0.56
SHKBP1-218ENST00000598907 GPX5O75715 221 aa11.58□□□□□ -0.56
SHKBP1-218ENST00000598907 GATBO75879 557 aaKnown RBP11.58□□□□□ -0.56
SHKBP1-218ENST00000598907 SERPINA3P01011 423 aa11.58□□□□□ -0.56
SHKBP1-218ENST00000598907 IGHV3-13P01766 116 aa11.58□□□□□ -0.56
SHKBP1-218ENST00000598907 HLA-DPB1P04440 258 aa11.58□□□□□ -0.56
SHKBP1-218ENST00000598907 GADD45AP24522 165 aa11.58□□□□□ -0.56
SHKBP1-218ENST00000598907 FGF9P31371 208 aaPredicted RBP11.58□□□□□ -0.56
SHKBP1-218ENST00000598907 DDOSTP39656 456 aa11.58□□□□□ -0.56
SHKBP1-218ENST00000598907 MAP2K3P46734 347 aa11.58□□□□□ -0.56
SHKBP1-218ENST00000598907 PDCD1Q15116 288 aa11.58□□□□□ -0.56
SHKBP1-218ENST00000598907 DEFB112Q30KQ8 113 aa11.58□□□□□ -0.56
SHKBP1-218ENST00000598907 GFOD2Q3B7J2 385 aa11.58□□□□□ -0.56
SHKBP1-218ENST00000598907 PCGF3Q3KNV8 242 aa11.58□□□□□ -0.56
SHKBP1-218ENST00000598907 ACSM3Q53FZ2 586 aa11.58□□□□□ -0.56
SHKBP1-218ENST00000598907 ZBTB37Q5TC79 503 aa11.58□□□□□ -0.56
SHKBP1-218ENST00000598907 MRPL21Q7Z2W9 205 aaKnown RBP11.58□□□□□ -0.56
SHKBP1-218ENST00000598907 SATL1Q86VE3 508 aa11.58□□□□□ -0.56
SHKBP1-218ENST00000598907 ANKRD13BQ86YJ7 626 aa11.58□□□□□ -0.56
SHKBP1-218ENST00000598907 CCL17Q92583 94 aa11.58□□□□□ -0.56
SHKBP1-218ENST00000598907 TMEM203Q969S6 136 aa11.58□□□□□ -0.56
SHKBP1-218ENST00000598907 C10orf35Q96D05 121 aa11.58□□□□□ -0.56
SHKBP1-218ENST00000598907 FAM71F1Q96KD3 344 aaPredicted RBP11.58□□□□□ -0.56
SHKBP1-218ENST00000598907 FUNDC2Q9BWH2 189 aa11.58□□□□□ -0.56
SHKBP1-218ENST00000598907 SAP30LQ9HAJ7 183 aa11.58□□□□□ -0.56
SHKBP1-218ENST00000598907 STUB1Q9UNE7 303 aa11.58□□□□□ -0.56
SHKBP1-218ENST00000598907 PPIAL4EA0A075B759 164 aa11.57□□□□□ -0.56
SHKBP1-218ENST00000598907 PPIAL4CA0A0B4J2A2 164 aa11.57□□□□□ -0.56
SHKBP1-218ENST00000598907 A0A1B0GWJ7 208 aa11.57□□□□□ -0.56
SHKBP1-218ENST00000598907 CD300LBA8K4G0 201 aa11.57□□□□□ -0.56
SHKBP1-218ENST00000598907 IQCF6A8MYZ5 107 aa11.57□□□□□ -0.56
SHKBP1-218ENST00000598907 SRRM5B3KS81 715 aa11.57□□□□□ -0.56
SHKBP1-218ENST00000598907 ZNF879B4DU55 563 aa11.57□□□□□ -0.56
SHKBP1-218ENST00000598907 PPIAL4DF5H284 164 aa11.57□□□□□ -0.56
SHKBP1-218ENST00000598907 GABRPO00591 440 aa11.57□□□□□ -0.56
SHKBP1-218ENST00000598907 PPIAL4FP0DN26 164 aa11.57□□□□□ -0.56
SHKBP1-218ENST00000598907 PRSS12P56730 875 aa11.57□□□□□ -0.56
SHKBP1-218ENST00000598907 SEC61A1P61619 476 aaKnown RBP11.57□□□□□ -0.56
SHKBP1-218ENST00000598907 RIPPLY1Q0D2K3 151 aa11.57□□□□□ -0.56
SHKBP1-218ENST00000598907 INSL4Q14641 139 aa11.57□□□□□ -0.56
SHKBP1-218ENST00000598907 ZMAT1Q5H9K5 638 aa11.57□□□□□ -0.56
SHKBP1-218ENST00000598907 RUSC1-AS1Q66K80 236 aa11.57□□□□□ -0.56
SHKBP1-218ENST00000598907 TMEM42Q69YG0 159 aa11.57□□□□□ -0.56
SHKBP1-218ENST00000598907 BRD3OSQ6XYD6 125 aa11.57□□□□□ -0.56
SHKBP1-218ENST00000598907 GDPGP1Q6ZNW5 385 aa11.57□□□□□ -0.56
SHKBP1-218ENST00000598907 SLC16A12Q6ZSM3 486 aa11.57□□□□□ -0.56
SHKBP1-218ENST00000598907 COMMD2Q86X83 199 aa11.57□□□□□ -0.56
SHKBP1-218ENST00000598907 PARP16Q8N5Y8 322 aa11.57□□□□□ -0.56
SHKBP1-218ENST00000598907 SYNPRQ8TBG9 265 aa11.57□□□□□ -0.56
SHKBP1-218ENST00000598907 PHYHIPQ92561 330 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms