RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 GYPAP02724 150 aa14.63□□□□□ -0.07
USHBP1-209ENST00000598570 LIPFP07098 398 aa14.63□□□□□ -0.07
USHBP1-209ENST00000598570 CCDC159P0C7I6 412 aa14.63□□□□□ -0.07
USHBP1-209ENST00000598570 ADRA2CP18825 462 aa14.63□□□□□ -0.07
USHBP1-209ENST00000598570 ST3GAL4Q11206 333 aa14.63□□□□□ -0.07
USHBP1-209ENST00000598570 ODF4Q2M2E3 257 aa14.63□□□□□ -0.07
USHBP1-209ENST00000598570 CD276Q5ZPR3 534 aa14.63□□□□□ -0.07
USHBP1-209ENST00000598570 HAGHLQ6PII5 290 aaPredicted RBP14.63□□□□□ -0.07
USHBP1-209ENST00000598570 IL17RELQ6ZVW7 336 aa14.63□□□□□ -0.07
USHBP1-209ENST00000598570 CALHM1Q8IU99 346 aa14.63□□□□□ -0.07
USHBP1-209ENST00000598570 OR51A4Q8NGJ6 313 aa14.63□□□□□ -0.07
USHBP1-209ENST00000598570 SDSLQ96GA7 329 aa14.63□□□□□ -0.07
USHBP1-209ENST00000598570 OR5V1Q9UGF6 321 aa14.63□□□□□ -0.07
USHBP1-209ENST00000598570 CLEC2DQ9UHP7 191 aa14.63□□□□□ -0.07
USHBP1-209ENST00000598570 IGKV1D-17A0A075B6S4 117 aa14.62□□□□□ -0.07
USHBP1-209ENST00000598570 LOC105371242A0A075B767 164 aa14.62□□□□□ -0.07
USHBP1-209ENST00000598570 IGHV3OR15-7A0A075B7D8 119 aa14.62□□□□□ -0.07
USHBP1-209ENST00000598570 AKR7A2O43488 359 aa14.62□□□□□ -0.07
USHBP1-209ENST00000598570 ADAM20O43506 726 aa14.62□□□□□ -0.07
USHBP1-209ENST00000598570 SERPINA3P01011 423 aa14.62□□□□□ -0.07
USHBP1-209ENST00000598570 CD1AP06126 327 aa14.62□□□□□ -0.07
USHBP1-209ENST00000598570 HAAOP46952 286 aa14.62□□□□□ -0.07
USHBP1-209ENST00000598570 AQP4P55087 323 aa14.62□□□□□ -0.07
USHBP1-209ENST00000598570 DMRTC1Q5HYR2 192 aa14.62□□□□□ -0.07
USHBP1-209ENST00000598570 C6orf141Q5SZD1 244 aa14.62□□□□□ -0.07
USHBP1-209ENST00000598570 TMPRSS11AQ6ZMR5 421 aa14.62□□□□□ -0.07
USHBP1-209ENST00000598570 ACP7Q6ZNF0 438 aa14.62□□□□□ -0.07
USHBP1-209ENST00000598570 KCTD8Q6ZWB6 473 aa14.62□□□□□ -0.07
USHBP1-209ENST00000598570 BOLLQ8N9W6 283 aaKnown RBP14.62□□□□□ -0.07
USHBP1-209ENST00000598570 C8orf46Q8TAG6 207 aa14.62□□□□□ -0.07
USHBP1-209ENST00000598570 RGP1Q92546 391 aaPredicted RBP14.62□□□□□ -0.07
USHBP1-209ENST00000598570 UPRTQ96BW1 309 aa14.62□□□□□ -0.07
USHBP1-209ENST00000598570 FGGYQ96C11 551 aa14.62□□□□□ -0.07
USHBP1-209ENST00000598570 ANKRD60Q9BZ19 345 aa14.62□□□□□ -0.07
USHBP1-209ENST00000598570 NLKQ9UBE8 527 aa14.62□□□□□ -0.07
USHBP1-209ENST00000598570 POLDIP2Q9Y2S7 368 aa14.62□□□□□ -0.07
USHBP1-209ENST00000598570 SIRT4Q9Y6E7 314 aaPredicted RBP14.62□□□□□ -0.07
USHBP1-209ENST00000598570 OR2AT4A6NND4 320 aa14.61□□□□□ -0.07
USHBP1-209ENST00000598570 DVL1O14640 695 aa14.61□□□□□ -0.07
USHBP1-209ENST00000598570 SIGLEC5O15389 551 aa14.61□□□□□ -0.07
USHBP1-209ENST00000598570 SYNGR1O43759 233 aa14.61□□□□□ -0.07
USHBP1-209ENST00000598570 PSG2P11465 335 aa14.61□□□□□ -0.07
USHBP1-209ENST00000598570 ATF1P18846 271 aa14.61□□□□□ -0.07
USHBP1-209ENST00000598570 MYF6P23409 242 aa14.61□□□□□ -0.07
USHBP1-209ENST00000598570 GTF2A1P52655 376 aaPredicted RBP14.61□□□□□ -0.07
USHBP1-209ENST00000598570 CDK5R1Q15078 307 aa14.61□□□□□ -0.07
USHBP1-209ENST00000598570 KLF17Q5JT82 389 aaPredicted RBP14.61□□□□□ -0.07
USHBP1-209ENST00000598570 OR2G6Q5TZ20 316 aa14.61□□□□□ -0.07
USHBP1-209ENST00000598570 DMKNQ6E0U4 476 aaPredicted RBP14.61□□□□□ -0.07
USHBP1-209ENST00000598570 XAF1Q6GPH4 301 aa14.61□□□□□ -0.07
USHBP1-209ENST00000598570 ZNF771Q7L3S4 317 aaPredicted RBP14.61□□□□□ -0.07
USHBP1-209ENST00000598570 SLC36A1Q7Z2H8 476 aa14.61□□□□□ -0.07
USHBP1-209ENST00000598570 OR5AK2Q8NH90 309 aa14.61□□□□□ -0.07
USHBP1-209ENST00000598570 NANPQ8TBE9 248 aa14.61□□□□□ -0.07
USHBP1-209ENST00000598570 SPSB1Q96BD6 273 aa14.61□□□□□ -0.07
USHBP1-209ENST00000598570 MED30Q96HR3 178 aa14.61□□□□□ -0.07
USHBP1-209ENST00000598570 GAFA1Q96PS6 74 aa14.61□□□□□ -0.07
USHBP1-209ENST00000598570 CCL13Q99616 98 aa14.61□□□□□ -0.07
USHBP1-209ENST00000598570 CDCA4Q9BXL8 241 aa14.61□□□□□ -0.07
USHBP1-209ENST00000598570 SLC7A11Q9UPY5 501 aa14.61□□□□□ -0.07
USHBP1-209ENST00000598570 AUP1Q9Y679 476 aa14.61□□□□□ -0.07
USHBP1-209ENST00000598570 A0A0A6YYJ9 748 aa14.6□□□□□ -0.07
USHBP1-209ENST00000598570 TRBV2A0A0J9YWF9 115 aa14.6□□□□□ -0.07
USHBP1-209ENST00000598570 XPNPEP2O43895 674 aa14.6□□□□□ -0.07
USHBP1-209ENST00000598570 LALBAP00709 142 aa14.6□□□□□ -0.07
USHBP1-209ENST00000598570 MMP9P14780 707 aa14.6□□□□□ -0.07
USHBP1-209ENST00000598570 PRKACBP22694 351 aa14.6□□□□□ -0.07
USHBP1-209ENST00000598570 CAV3P56539 151 aa14.6□□□□□ -0.07
USHBP1-209ENST00000598570 ASPHD2Q6ICH7 369 aa14.6□□□□□ -0.07
USHBP1-209ENST00000598570 C9orf139Q6ZV77 190 aa14.6□□□□□ -0.07
USHBP1-209ENST00000598570 USP43Q70EL4 1123 aa14.6□□□□□ -0.07
USHBP1-209ENST00000598570 ANGPTL5Q86XS5 388 aa14.6□□□□□ -0.07
USHBP1-209ENST00000598570 ZNF676Q8N7Q3 588 aa14.6□□□□□ -0.07
USHBP1-209ENST00000598570 PDCD1LG2Q9BQ51 273 aa14.6□□□□□ -0.07
USHBP1-209ENST00000598570 NUDT16L1Q9BRJ7 211 aaKnown RBP14.6□□□□□ -0.07
USHBP1-209ENST00000598570 DUSP21Q9H596 190 aa14.6□□□□□ -0.07
USHBP1-209ENST00000598570 PLEKHA1Q9HB21 404 aa14.6□□□□□ -0.07
USHBP1-209ENST00000598570 MTCH1Q9NZJ7 389 aa14.6□□□□□ -0.07
USHBP1-209ENST00000598570 METRNQ9UJH8 293 aa14.6□□□□□ -0.07
USHBP1-209ENST00000598570 MAB21L2Q9Y586 359 aa14.6□□□□□ -0.07
USHBP1-209ENST00000598570 A0A1B0GW55 424 aa14.59□□□□□ -0.07
USHBP1-209ENST00000598570 TMPRSS2O15393 492 aa14.59□□□□□ -0.07
USHBP1-209ENST00000598570 ENSAO43768 121 aaKnown RBP14.59□□□□□ -0.07
USHBP1-209ENST00000598570 GPX5O75715 221 aa14.59□□□□□ -0.07
USHBP1-209ENST00000598570 DUX4L2P0CJ85 424 aa14.59□□□□□ -0.07
USHBP1-209ENST00000598570 DUX4L3P0CJ86 424 aa14.59□□□□□ -0.07
USHBP1-209ENST00000598570 DUX4L4P0CJ87 422 aa14.59□□□□□ -0.07
USHBP1-209ENST00000598570 DUX4L5P0CJ88 424 aa14.59□□□□□ -0.07
USHBP1-209ENST00000598570 DUX4L6P0CJ89 424 aa14.59□□□□□ -0.07
USHBP1-209ENST00000598570 DUX4L7P0CJ90 424 aa14.59□□□□□ -0.07
USHBP1-209ENST00000598570 MYL12AP19105 171 aa14.59□□□□□ -0.07
USHBP1-209ENST00000598570 GLRA1P23415 457 aa14.59□□□□□ -0.07
USHBP1-209ENST00000598570 C21orf33P30042 268 aaPredicted RBP14.59□□□□□ -0.07
USHBP1-209ENST00000598570 RPS11P62280 158 aaKnown RBP eCLIP14.59□□□□□ -0.07
USHBP1-209ENST00000598570 ACSM1Q08AH1 577 aa14.59□□□□□ -0.07
USHBP1-209ENST00000598570 CNN3Q15417 329 aaKnown RBP14.59□□□□□ -0.07
USHBP1-209ENST00000598570 DUX4L9Q6RFH8 374 aaPredicted RBP14.59□□□□□ -0.07
USHBP1-209ENST00000598570 BTNL3Q6UXE8 466 aa14.59□□□□□ -0.07
USHBP1-209ENST00000598570 NANOGP1Q8N7R0 232 aa14.59□□□□□ -0.07
USHBP1-209ENST00000598570 OR5T2Q8NGG2 359 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms