RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 GATBO75879 557 aaKnown RBP13.87□□□□□ -0.19
SSBP4-204ENST00000597724 PGA5P0DJD9 388 aa13.87□□□□□ -0.19
SSBP4-204ENST00000597724 MPZP25189 248 aa13.87□□□□□ -0.19
SSBP4-204ENST00000597724 FUT6P51993 359 aa13.87□□□□□ -0.19
SSBP4-204ENST00000597724 GBX2P52951 348 aaPredicted RBP13.87□□□□□ -0.19
SSBP4-204ENST00000597724 KLF17Q5JT82 389 aaPredicted RBP13.87□□□□□ -0.19
SSBP4-204ENST00000597724 LAIR2Q6ISS4 152 aa13.87□□□□□ -0.19
SSBP4-204ENST00000597724 ZNF788Q6ZQV5 615 aa13.87□□□□□ -0.19
SSBP4-204ENST00000597724 BTN2A1Q7KYR7 527 aa13.87□□□□□ -0.19
SSBP4-204ENST00000597724 CALHM1Q8IU99 346 aa13.87□□□□□ -0.19
SSBP4-204ENST00000597724 FAM216BQ8N7L0 139 aa13.87□□□□□ -0.19
SSBP4-204ENST00000597724 ZNF676Q8N7Q3 588 aa13.87□□□□□ -0.19
SSBP4-204ENST00000597724 OR51A4Q8NGJ6 313 aa13.87□□□□□ -0.19
SSBP4-204ENST00000597724 HAVCR2Q8TDQ0 301 aa13.87□□□□□ -0.19
SSBP4-204ENST00000597724 NPRL2Q8WTW4 380 aa13.87□□□□□ -0.19
SSBP4-204ENST00000597724 FBLIM1Q8WUP2 373 aa13.87□□□□□ -0.19
SSBP4-204ENST00000597724 TMIGD2Q96BF3 282 aa13.87□□□□□ -0.19
SSBP4-204ENST00000597724 OCEL1Q9H607 264 aa13.87□□□□□ -0.19
SSBP4-204ENST00000597724 DIMT1Q9UNQ2 313 aaKnown RBP13.87□□□□□ -0.19
SSBP4-204ENST00000597724 CAB39Q9Y376 341 aaPredicted RBP13.87□□□□□ -0.19
SSBP4-204ENST00000597724 IGKV1D-17A0A075B6S4 117 aa13.86□□□□□ -0.19
SSBP4-204ENST00000597724 IGKV1-27A0A075B6S5 117 aa13.86□□□□□ -0.19
SSBP4-204ENST00000597724 H0YJX3 145 aa13.86□□□□□ -0.19
SSBP4-204ENST00000597724 TCF21O43680 179 aa13.86□□□□□ -0.19
SSBP4-204ENST00000597724 ZFPL1O95159 310 aa13.86□□□□□ -0.19
SSBP4-204ENST00000597724 ECDO95905 644 aaPredicted RBP13.86□□□□□ -0.19
SSBP4-204ENST00000597724 LIPFP07098 398 aa13.86□□□□□ -0.19
SSBP4-204ENST00000597724 RPSAP08865 295 aaKnown RBP13.86□□□□□ -0.19
SSBP4-204ENST00000597724 ACAA1P09110 424 aaPredicted RBP13.86□□□□□ -0.19
SSBP4-204ENST00000597724 PSG2P11465 335 aa13.86□□□□□ -0.19
SSBP4-204ENST00000597724 ARMCX4Q5H9R4 360 aa13.86□□□□□ -0.19
SSBP4-204ENST00000597724 ACP7Q6ZNF0 438 aa13.86□□□□□ -0.19
SSBP4-204ENST00000597724 UTS2BQ765I0 119 aa13.86□□□□□ -0.19
SSBP4-204ENST00000597724 ANGPTL5Q86XS5 388 aa13.86□□□□□ -0.19
SSBP4-204ENST00000597724 FGFRL1Q8N441 504 aa13.86□□□□□ -0.19
SSBP4-204ENST00000597724 TRMT10AQ8TBZ6 339 aaKnown RBP13.86□□□□□ -0.19
SSBP4-204ENST00000597724 GGHQ92820 318 aa13.86□□□□□ -0.19
SSBP4-204ENST00000597724 UPRTQ96BW1 309 aa13.86□□□□□ -0.19
SSBP4-204ENST00000597724 MED30Q96HR3 178 aa13.86□□□□□ -0.19
SSBP4-204ENST00000597724 ZNF488Q96MN9 340 aa13.86□□□□□ -0.19
SSBP4-204ENST00000597724 GAFA1Q96PS6 74 aa13.86□□□□□ -0.19
SSBP4-204ENST00000597724 PKIBQ9C010 78 aa13.86□□□□□ -0.19
SSBP4-204ENST00000597724 PLCXD1Q9NUJ7 323 aa13.86□□□□□ -0.19
SSBP4-204ENST00000597724 POLDIP2Q9Y2S7 368 aa13.86□□□□□ -0.19
SSBP4-204ENST00000597724 IGKV1-9A0A0C4DH69 117 aa13.85□□□□□ -0.19
SSBP4-204ENST00000597724 TMEM212A6NML5 194 aa13.85□□□□□ -0.19
SSBP4-204ENST00000597724 GPR37O15354 613 aa13.85□□□□□ -0.19
SSBP4-204ENST00000597724 NDUFB3O43676 98 aa13.85□□□□□ -0.19
SSBP4-204ENST00000597724 TFF1P04155 84 aa13.85□□□□□ -0.19
SSBP4-204ENST00000597724 CCDC159P0C7I6 412 aa13.85□□□□□ -0.19
SSBP4-204ENST00000597724 ZNF20P17024 532 aa13.85□□□□□ -0.19
SSBP4-204ENST00000597724 GTF2A1P52655 376 aaPredicted RBP13.85□□□□□ -0.19
SSBP4-204ENST00000597724 ERVK11-1P61568 191 aa13.85□□□□□ -0.19
SSBP4-204ENST00000597724 IL13RA1P78552 427 aa13.85□□□□□ -0.19
SSBP4-204ENST00000597724 IL24Q13007 206 aa13.85□□□□□ -0.19
SSBP4-204ENST00000597724 IKZF1Q13422 519 aa13.85□□□□□ -0.19
SSBP4-204ENST00000597724 CNN3Q15417 329 aaKnown RBP13.85□□□□□ -0.19
SSBP4-204ENST00000597724 TMPRSS11AQ6ZMR5 421 aa13.85□□□□□ -0.19
SSBP4-204ENST00000597724 PNLDC1Q8NA58 520 aaKnown RBP13.85□□□□□ -0.19
SSBP4-204ENST00000597724 DNAAF1Q8NEP3 725 aa13.85□□□□□ -0.19
SSBP4-204ENST00000597724 OR13C3Q8NGS6 347 aa13.85□□□□□ -0.19
SSBP4-204ENST00000597724 OR5AK2Q8NH90 309 aa13.85□□□□□ -0.19
SSBP4-204ENST00000597724 ST8SIA4Q92187 359 aa13.85□□□□□ -0.19
SSBP4-204ENST00000597724 BORCS8Q96FH0 119 aa13.85□□□□□ -0.19
SSBP4-204ENST00000597724 TMEM80Q96HE8 168 aa13.85□□□□□ -0.19
SSBP4-204ENST00000597724 PDCD1LG2Q9BQ51 273 aa13.85□□□□□ -0.19
SSBP4-204ENST00000597724 NRIP2Q9BQI9 281 aa13.85□□□□□ -0.19
SSBP4-204ENST00000597724 CLEC2DQ9UHP7 191 aa13.85□□□□□ -0.19
SSBP4-204ENST00000597724 RPUSD1Q9UJJ7 312 aaKnown RBP13.85□□□□□ -0.19
SSBP4-204ENST00000597724 ZNF222Q9UK12 451 aa13.85□□□□□ -0.19
SSBP4-204ENST00000597724 NUP50Q9UKX7 468 aa13.85□□□□□ -0.19
SSBP4-204ENST00000597724 EXOSC1Q9Y3B2 195 aaKnown RBP13.85□□□□□ -0.19
SSBP4-204ENST00000597724 A0A0A6YYJ9 748 aa13.84□□□□□ -0.19
SSBP4-204ENST00000597724 TRBV2A0A0J9YWF9 115 aa13.84□□□□□ -0.19
SSBP4-204ENST00000597724 NKX6-3A6NJ46 265 aa13.84□□□□□ -0.19
SSBP4-204ENST00000597724 ZNF879B4DU55 563 aa13.84□□□□□ -0.19
SSBP4-204ENST00000597724 SIGLEC5O15389 551 aa13.84□□□□□ -0.19
SSBP4-204ENST00000597724 XPNPEP2O43895 674 aa13.84□□□□□ -0.19
SSBP4-204ENST00000597724 PIPP12273 146 aaPredicted RBP13.84□□□□□ -0.19
SSBP4-204ENST00000597724 SELLP14151 372 aa13.84□□□□□ -0.19
SSBP4-204ENST00000597724 MYL12AP19105 171 aa13.84□□□□□ -0.19
SSBP4-204ENST00000597724 FGF12P61328 243 aa13.84□□□□□ -0.19
SSBP4-204ENST00000597724 SRSF2Q01130 221 aaKnown RBP13.84□□□□□ -0.19
SSBP4-204ENST00000597724 ST3GAL4Q11206 333 aa13.84□□□□□ -0.19
SSBP4-204ENST00000597724 DGUOKQ16854 277 aa13.84□□□□□ -0.19
SSBP4-204ENST00000597724 SMIM21Q3B7S5 101 aa13.84□□□□□ -0.19
SSBP4-204ENST00000597724 CCDC58Q4VC31 144 aa13.84□□□□□ -0.19
SSBP4-204ENST00000597724 LRRC10Q5BKY1 277 aa13.84□□□□□ -0.19
SSBP4-204ENST00000597724 OR2G6Q5TZ20 316 aa13.84□□□□□ -0.19
SSBP4-204ENST00000597724 XAF1Q6GPH4 301 aa13.84□□□□□ -0.19
SSBP4-204ENST00000597724 ZNF418Q8TF45 676 aaPredicted RBP13.84□□□□□ -0.19
SSBP4-204ENST00000597724 TMEM158Q8WZ71 300 aa13.84□□□□□ -0.19
SSBP4-204ENST00000597724 COMMD4Q9H0A8 199 aa13.84□□□□□ -0.19
SSBP4-204ENST00000597724 HES4Q9HCC6 221 aa13.84□□□□□ -0.19
SSBP4-204ENST00000597724 BABAM2Q9NXR7 383 aa13.84□□□□□ -0.19
SSBP4-204ENST00000597724 PSORS1C1Q9UIG5 152 aa13.84□□□□□ -0.19
SSBP4-204ENST00000597724 EFCAB10A6NFE3 127 aa13.83□□□□□ -0.2
SSBP4-204ENST00000597724 RNF212BA8MTL3 300 aa13.83□□□□□ -0.2
SSBP4-204ENST00000597724 NXPH2O95156 264 aa13.83□□□□□ -0.2
SSBP4-204ENST00000597724 ATF1P18846 271 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms