RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 SERPINA12Q8IW75 414 aa16.44■□□□□ 0.22
SHKBP1-214ENST00000597396 OR5D14Q8NGL3 314 aa16.44■□□□□ 0.22
SHKBP1-214ENST00000597396 GHSRQ92847 366 aa16.44■□□□□ 0.22
SHKBP1-214ENST00000597396 LRCH1Q9Y2L9 728 aa16.44■□□□□ 0.22
SHKBP1-214ENST00000597396 TRAV20A0A0B4J274 112 aa16.43■□□□□ 0.22
SHKBP1-214ENST00000597396 INAFM1C9JVW0 142 aa16.43■□□□□ 0.22
SHKBP1-214ENST00000597396 ADAM20O43506 726 aa16.43■□□□□ 0.22
SHKBP1-214ENST00000597396 NDUFA2O43678 99 aa16.43■□□□□ 0.22
SHKBP1-214ENST00000597396 PLPP2O43688 288 aa16.43■□□□□ 0.22
SHKBP1-214ENST00000597396 SYNGR1O43759 233 aa16.43■□□□□ 0.22
SHKBP1-214ENST00000597396 WNT2P09544 360 aa16.43■□□□□ 0.22
SHKBP1-214ENST00000597396 CPT2P23786 658 aa16.43■□□□□ 0.22
SHKBP1-214ENST00000597396 RBP2P50120 134 aa16.43■□□□□ 0.22
SHKBP1-214ENST00000597396 LCN2P80188 198 aa16.43■□□□□ 0.22
SHKBP1-214ENST00000597396 BDH1Q02338 343 aa16.43■□□□□ 0.22
SHKBP1-214ENST00000597396 SPHARQ15513 63 aa16.43■□□□□ 0.22
SHKBP1-214ENST00000597396 LYPD2Q6UXB3 125 aa16.43■□□□□ 0.22
SHKBP1-214ENST00000597396 LHFPL2Q6ZUX7 228 aa16.43■□□□□ 0.22
SHKBP1-214ENST00000597396 ANGPTL5Q86XS5 388 aa16.43■□□□□ 0.22
SHKBP1-214ENST00000597396 FAM90A1Q86YD7 464 aa16.43■□□□□ 0.22
SHKBP1-214ENST00000597396 PARP16Q8N5Y8 322 aa16.43■□□□□ 0.22
SHKBP1-214ENST00000597396 DNAAF1Q8NEP3 725 aa16.43■□□□□ 0.22
SHKBP1-214ENST00000597396 OR13C5Q8NGS8 318 aa16.43■□□□□ 0.22
SHKBP1-214ENST00000597396 TMEM186Q96B77 213 aa16.43■□□□□ 0.22
SHKBP1-214ENST00000597396 SPSB1Q96BD6 273 aa16.43■□□□□ 0.22
SHKBP1-214ENST00000597396 OPALINQ96PE5 141 aa16.43■□□□□ 0.22
SHKBP1-214ENST00000597396 OR5M11Q96RB7 305 aa16.43■□□□□ 0.22
SHKBP1-214ENST00000597396 PKIBQ9C010 78 aa16.43■□□□□ 0.22
SHKBP1-214ENST00000597396 WDR13Q9H1Z4 485 aa16.43■□□□□ 0.22
SHKBP1-214ENST00000597396 IGKV1-9A0A0C4DH69 117 aa16.42■□□□□ 0.22
SHKBP1-214ENST00000597396 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.42■□□□□ 0.22
SHKBP1-214ENST00000597396 PLATP00750 562 aa16.42■□□□□ 0.22
SHKBP1-214ENST00000597396 PCMT1P22061 227 aa16.42■□□□□ 0.22
SHKBP1-214ENST00000597396 PITPNBP48739 271 aa16.42■□□□□ 0.22
SHKBP1-214ENST00000597396 SEC61A1P61619 476 aaKnown RBP16.42■□□□□ 0.22
SHKBP1-214ENST00000597396 GNB2P62879 340 aa16.42■□□□□ 0.22
SHKBP1-214ENST00000597396 ACSM1Q08AH1 577 aa16.42■□□□□ 0.22
SHKBP1-214ENST00000597396 YIF1BQ5BJH7 314 aa16.42■□□□□ 0.22
SHKBP1-214ENST00000597396 CALHM1Q8IU99 346 aa16.42■□□□□ 0.22
SHKBP1-214ENST00000597396 TMEM106AQ96A25 262 aa16.42■□□□□ 0.22
SHKBP1-214ENST00000597396 TMIGD2Q96BF3 282 aa16.42■□□□□ 0.22
SHKBP1-214ENST00000597396 SEH1LQ96EE3 360 aa16.42■□□□□ 0.22
SHKBP1-214ENST00000597396 PGLYRP3Q96LB9 341 aa16.42■□□□□ 0.22
SHKBP1-214ENST00000597396 SSBP3Q9BWW4 388 aaPredicted RBP16.42■□□□□ 0.22
SHKBP1-214ENST00000597396 SNTG1Q9NSN8 517 aa16.42■□□□□ 0.22
SHKBP1-214ENST00000597396 HIF1ANQ9NWT6 349 aa16.42■□□□□ 0.22
SHKBP1-214ENST00000597396 LSM2Q9Y333 95 aaKnown RBP16.42■□□□□ 0.22
SHKBP1-214ENST00000597396 JMJD1CQ15652 2540 aa16.41■□□□□ 0.22
SHKBP1-214ENST00000597396 IGKV1-27A0A075B6S5 117 aa16.41■□□□□ 0.22
SHKBP1-214ENST00000597396 SULT1B1O43704 296 aa16.41■□□□□ 0.22
SHKBP1-214ENST00000597396 HCKP08631 526 aa16.41■□□□□ 0.22
SHKBP1-214ENST00000597396 MPZP25189 248 aa16.41■□□□□ 0.22
SHKBP1-214ENST00000597396 POU3F4P49335 361 aa16.41■□□□□ 0.22
SHKBP1-214ENST00000597396 MTCP1P56278 107 aa16.41■□□□□ 0.22
SHKBP1-214ENST00000597396 GABARAPL2P60520 117 aa16.41■□□□□ 0.22
SHKBP1-214ENST00000597396 DOC2BQ14184 412 aa16.41■□□□□ 0.22
SHKBP1-214ENST00000597396 POC1AQ8NBT0 407 aa16.41■□□□□ 0.22
SHKBP1-214ENST00000597396 OR5T2Q8NGG2 359 aa16.41■□□□□ 0.22
SHKBP1-214ENST00000597396 C12orf43Q96C57 262 aaKnown RBP16.41■□□□□ 0.22
SHKBP1-214ENST00000597396 ZNF488Q96MN9 340 aa16.41■□□□□ 0.22
SHKBP1-214ENST00000597396 CLN8Q9UBY8 286 aa16.41■□□□□ 0.22
SHKBP1-214ENST00000597396 PHF1O43189 567 aaPredicted RBP16.4■□□□□ 0.22
SHKBP1-214ENST00000597396 NXPH2O95156 264 aa16.4■□□□□ 0.22
SHKBP1-214ENST00000597396 CYB5AP00167 134 aa16.4■□□□□ 0.22
SHKBP1-214ENST00000597396 CD1AP06126 327 aa16.4■□□□□ 0.22
SHKBP1-214ENST00000597396 PGA5P0DJD9 388 aa16.4■□□□□ 0.22
SHKBP1-214ENST00000597396 RAB3AP20336 220 aa16.4■□□□□ 0.22
SHKBP1-214ENST00000597396 IL24Q13007 206 aa16.4■□□□□ 0.22
SHKBP1-214ENST00000597396 SMIM21Q3B7S5 101 aa16.4■□□□□ 0.22
SHKBP1-214ENST00000597396 Q499Y3 187 aa16.4■□□□□ 0.22
SHKBP1-214ENST00000597396 SLC36A1Q7Z2H8 476 aa16.4■□□□□ 0.22
SHKBP1-214ENST00000597396 RFT1Q96AA3 541 aa16.4■□□□□ 0.22
SHKBP1-214ENST00000597396 YTHDF1Q9BYJ9 559 aaKnown RBP16.4■□□□□ 0.22
SHKBP1-214ENST00000597396 RASL12Q9NYN1 266 aa16.4■□□□□ 0.22
SHKBP1-214ENST00000597396 TAS2R4Q9NYW5 299 aa16.4■□□□□ 0.22
SHKBP1-214ENST00000597396 NLKQ9UBE8 527 aa16.4■□□□□ 0.22
SHKBP1-214ENST00000597396 OR5V1Q9UGF6 321 aa16.4■□□□□ 0.22
SHKBP1-214ENST00000597396 TRBV5-5A0A0J9YX44 114 aa16.39■□□□□ 0.21
SHKBP1-214ENST00000597396 NKX6-3A6NJ46 265 aa16.39■□□□□ 0.21
SHKBP1-214ENST00000597396 A8MXK9 166 aa16.39■□□□□ 0.21
SHKBP1-214ENST00000597396 TMPRSS2O15393 492 aa16.39■□□□□ 0.21
SHKBP1-214ENST00000597396 MAGEB3O15480 346 aa16.39■□□□□ 0.21
SHKBP1-214ENST00000597396 NOS1APO75052 506 aaPredicted RBP16.39■□□□□ 0.21
SHKBP1-214ENST00000597396 INMTO95050 263 aa16.39■□□□□ 0.21
SHKBP1-214ENST00000597396 ALX3O95076 343 aa16.39■□□□□ 0.21
SHKBP1-214ENST00000597396 HSMCR30P0CW71 290 aa16.39■□□□□ 0.21
SHKBP1-214ENST00000597396 ZFP36P26651 326 aaKnown RBP16.39■□□□□ 0.21
SHKBP1-214ENST00000597396 MAP2K4P45985 399 aa16.39■□□□□ 0.21
SHKBP1-214ENST00000597396 PPP3R1P63098 170 aa16.39■□□□□ 0.21
SHKBP1-214ENST00000597396 CR1LQ2VPA4 569 aa16.39■□□□□ 0.21
SHKBP1-214ENST00000597396 DCAF12L2Q5VW00 463 aa16.39■□□□□ 0.21
SHKBP1-214ENST00000597396 STUMQ69YW2 141 aa16.39■□□□□ 0.21
SHKBP1-214ENST00000597396 ACP7Q6ZNF0 438 aa16.39■□□□□ 0.21
SHKBP1-214ENST00000597396 SLC25A26Q70HW3 274 aa16.39■□□□□ 0.21
SHKBP1-214ENST00000597396 MKXQ8IYA7 352 aa16.39■□□□□ 0.21
SHKBP1-214ENST00000597396 BATF2Q8N1L9 274 aa16.39■□□□□ 0.21
SHKBP1-214ENST00000597396 UFD1Q92890 307 aa16.39■□□□□ 0.21
SHKBP1-214ENST00000597396 SLAMF9Q96A28 289 aa16.39■□□□□ 0.21
SHKBP1-214ENST00000597396 SPACA5Q96QH8 159 aa16.39■□□□□ 0.21
SHKBP1-214ENST00000597396 CCL13Q99616 98 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms