RNA–Protein interactions for RNA: ENST00000596638.1

SIN3B-208, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 5

Gene SIN3B, Length 1,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-208ENST00000596638 IFNA2P01563 188 aa7.53□□□□□ -1.2
SIN3B-208ENST00000596638 IFNA21P01568 189 aa7.53□□□□□ -1.2
SIN3B-208ENST00000596638 IGHG1P01857 330 aa7.53□□□□□ -1.2
SIN3B-208ENST00000596638 S100A9P06702 114 aaKnown RBP7.53□□□□□ -1.2
SIN3B-208ENST00000596638 NR2C1P13056 603 aa7.53□□□□□ -1.2
SIN3B-208ENST00000596638 IL11P20809 199 aa7.53□□□□□ -1.2
SIN3B-208ENST00000596638 LMO1P25800 156 aa7.53□□□□□ -1.2
SIN3B-208ENST00000596638 RPL12P30050 165 aaKnown RBP7.53□□□□□ -1.2
SIN3B-208ENST00000596638 RBMXP38159 391 aaKnown RBP7.53□□□□□ -1.2
SIN3B-208ENST00000596638 PTGFRP43088 359 aa7.53□□□□□ -1.2
SIN3B-208ENST00000596638 OR1D4P47884 311 aa7.53□□□□□ -1.2
SIN3B-208ENST00000596638 KCNJ3P48549 501 aa7.53□□□□□ -1.2
SIN3B-208ENST00000596638 DUSP3P51452 185 aaPredicted RBP7.53□□□□□ -1.2
SIN3B-208ENST00000596638 BIDP55957 195 aa7.53□□□□□ -1.2
SIN3B-208ENST00000596638 LSM6P62312 80 aaKnown RBP7.53□□□□□ -1.2
SIN3B-208ENST00000596638 RAB1AP62820 205 aa7.53□□□□□ -1.2
SIN3B-208ENST00000596638 CSNK2A1P68400 391 aaPredicted RBP7.53□□□□□ -1.2
SIN3B-208ENST00000596638 RNF4P78317 190 aa7.53□□□□□ -1.2
SIN3B-208ENST00000596638 POU3F1Q03052 451 aaPredicted RBP7.53□□□□□ -1.2
SIN3B-208ENST00000596638 SRSF6Q13247 344 aaKnown RBP7.53□□□□□ -1.2
SIN3B-208ENST00000596638 ARFRP1Q13795 201 aa7.53□□□□□ -1.2
SIN3B-208ENST00000596638 RBM39Q14498 530 aaKnown RBP7.53□□□□□ -1.2
SIN3B-208ENST00000596638 NSDHLQ15738 373 aa7.53□□□□□ -1.2
SIN3B-208ENST00000596638 HIST3H3Q16695 136 aa7.53□□□□□ -1.2
SIN3B-208ENST00000596638 HYAL4Q2M3T9 481 aa7.53□□□□□ -1.2
SIN3B-208ENST00000596638 RPL7L1Q6DKI1 246 aaKnown RBP7.53□□□□□ -1.2
SIN3B-208ENST00000596638 TMPPEQ6ZT21 453 aa7.53□□□□□ -1.2
SIN3B-208ENST00000596638 KMT5CQ86Y97 462 aa7.53□□□□□ -1.2
SIN3B-208ENST00000596638 UEVLDQ8IX04 471 aa7.53□□□□□ -1.2
SIN3B-208ENST00000596638 ZNF843Q8N446 348 aa7.53□□□□□ -1.2
SIN3B-208ENST00000596638 D2HGDHQ8N465 521 aa7.53□□□□□ -1.2
SIN3B-208ENST00000596638 LRTM2Q8N967 370 aa7.53□□□□□ -1.2
SIN3B-208ENST00000596638 PNLDC1Q8NA58 520 aaKnown RBP7.53□□□□□ -1.2
SIN3B-208ENST00000596638 TMEM104Q8NE00 496 aa7.53□□□□□ -1.2
SIN3B-208ENST00000596638 CSNK2A3Q8NEV1 391 aa7.53□□□□□ -1.2
SIN3B-208ENST00000596638 NOXO1Q8NFA2 376 aa7.53□□□□□ -1.2
SIN3B-208ENST00000596638 OR6X1Q8NH79 312 aa7.53□□□□□ -1.2
SIN3B-208ENST00000596638 ARHGAP5-AS1Q96IT6 56 aa7.53□□□□□ -1.2
SIN3B-208ENST00000596638 C5orf34Q96MH7 638 aa7.53□□□□□ -1.2
SIN3B-208ENST00000596638 SULT4A1Q9BR01 284 aa7.53□□□□□ -1.2
SIN3B-208ENST00000596638 ZNF251Q9BRH9 671 aa7.53□□□□□ -1.2
SIN3B-208ENST00000596638 GINS3Q9BRX5 216 aa7.53□□□□□ -1.2
SIN3B-208ENST00000596638 ADAT1Q9BUB4 502 aaKnown RBP7.53□□□□□ -1.2
SIN3B-208ENST00000596638 PECRQ9BY49 303 aa7.53□□□□□ -1.2
SIN3B-208ENST00000596638 HRH4Q9H3N8 390 aa7.53□□□□□ -1.2
SIN3B-208ENST00000596638 SDHAF3Q9NRP4 125 aa7.53□□□□□ -1.2
SIN3B-208ENST00000596638 FAM212BQ9NTI7 297 aaPredicted RBP7.53□□□□□ -1.2
SIN3B-208ENST00000596638 B3GAT1Q9P2W7 334 aa7.53□□□□□ -1.2
SIN3B-208ENST00000596638 METTL1Q9UBP6 276 aaKnown RBP7.53□□□□□ -1.2
SIN3B-208ENST00000596638 AMDHD2Q9Y303 409 aa7.53□□□□□ -1.2
SIN3B-208ENST00000596638 LHFPL6Q9Y693 200 aa7.53□□□□□ -1.2
SIN3B-208ENST00000596638 IGSF10Q6WRI0 2623 aa7.52□□□□□ -1.21
SIN3B-208ENST00000596638 BORCS7-ASMTA0A0B4J1R7 106 aa7.52□□□□□ -1.21
SIN3B-208ENST00000596638 A0A0U1RQV5 110 aa7.52□□□□□ -1.21
SIN3B-208ENST00000596638 CRYM-AS1A6NIL9 109 aa7.52□□□□□ -1.21
SIN3B-208ENST00000596638 C17orf51A8MQB3 221 aa7.52□□□□□ -1.21
SIN3B-208ENST00000596638 E5RGE8 158 aa7.52□□□□□ -1.21
SIN3B-208ENST00000596638 K7EPK0 472 aa7.52□□□□□ -1.21
SIN3B-208ENST00000596638 DEDDO75618 318 aa7.52□□□□□ -1.21
SIN3B-208ENST00000596638 EIF3GO75821 320 aaKnown RBP eCLIP7.52□□□□□ -1.21
SIN3B-208ENST00000596638 GLAP06280 429 aa7.52□□□□□ -1.21
SIN3B-208ENST00000596638 PGA4P0DJD7 388 aa7.52□□□□□ -1.21
SIN3B-208ENST00000596638 PGA3P0DJD8 388 aa7.52□□□□□ -1.21
SIN3B-208ENST00000596638 ZNF17P17021 662 aa7.52□□□□□ -1.21
SIN3B-208ENST00000596638 NFYBP25208 207 aa7.52□□□□□ -1.21
SIN3B-208ENST00000596638 FCGR2CP31995 323 aa7.52□□□□□ -1.21
SIN3B-208ENST00000596638 OR3A4PP47883 348 aa7.52□□□□□ -1.21
SIN3B-208ENST00000596638 ZNF133P52736 654 aaPredicted RBP7.52□□□□□ -1.21
SIN3B-208ENST00000596638 EFNA3P52797 238 aa7.52□□□□□ -1.21
SIN3B-208ENST00000596638 SNU13P55769 128 aaKnown RBP7.52□□□□□ -1.21
SIN3B-208ENST00000596638 GFERP55789 205 aa7.52□□□□□ -1.21
SIN3B-208ENST00000596638 ZNF121P58317 390 aaPredicted RBP7.52□□□□□ -1.21
SIN3B-208ENST00000596638 CLRN1P58418 232 aa7.52□□□□□ -1.21
SIN3B-208ENST00000596638 HGFACQ04756 655 aa7.52□□□□□ -1.21
SIN3B-208ENST00000596638 SQSTM1Q13501 440 aa7.52□□□□□ -1.21
SIN3B-208ENST00000596638 CHRFAM7AQ494W8 412 aa7.52□□□□□ -1.21
SIN3B-208ENST00000596638 C14orf28Q4W4Y0 310 aa7.52□□□□□ -1.21
SIN3B-208ENST00000596638 FOXL2NBQ6ZUU3 175 aa7.52□□□□□ -1.21
SIN3B-208ENST00000596638 C1QL4Q86Z23 238 aa7.52□□□□□ -1.21
SIN3B-208ENST00000596638 WDFY1Q8IWB7 410 aa7.52□□□□□ -1.21
SIN3B-208ENST00000596638 SGPP2Q8IWX5 399 aa7.52□□□□□ -1.21
SIN3B-208ENST00000596638 FAM71E2Q8N5Q1 922 aa7.52□□□□□ -1.21
SIN3B-208ENST00000596638 NFAM1Q8NET5 270 aaPredicted RBP7.52□□□□□ -1.21
SIN3B-208ENST00000596638 OR8G5Q8NG78 346 aa7.52□□□□□ -1.21
SIN3B-208ENST00000596638 OR9K2Q8NGE7 335 aa7.52□□□□□ -1.21
SIN3B-208ENST00000596638 OR8B12Q8NGG6 310 aa7.52□□□□□ -1.21
SIN3B-208ENST00000596638 FNDC9Q8TBE3 224 aa7.52□□□□□ -1.21
SIN3B-208ENST00000596638 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.52□□□□□ -1.21
SIN3B-208ENST00000596638 PP6455Q8WZ26 134 aa7.52□□□□□ -1.21
SIN3B-208ENST00000596638 ROBO4Q8WZ75 1007 aa7.52□□□□□ -1.21
SIN3B-208ENST00000596638 HIST1H2BAQ96A08 127 aa7.52□□□□□ -1.21
SIN3B-208ENST00000596638 POM121Q96HA1 1249 aa7.52□□□□□ -1.21
SIN3B-208ENST00000596638 ARL5BQ96KC2 179 aa7.52□□□□□ -1.21
SIN3B-208ENST00000596638 OXGR1Q96P68 337 aa7.52□□□□□ -1.21
SIN3B-208ENST00000596638 CMSS1Q9BQ75 279 aaKnown RBP7.52□□□□□ -1.21
SIN3B-208ENST00000596638 SCRT1Q9BWW7 348 aa7.52□□□□□ -1.21
SIN3B-208ENST00000596638 VN1R1Q9GZP7 353 aa7.52□□□□□ -1.21
SIN3B-208ENST00000596638 PNRC2Q9NPJ4 139 aaKnown RBP7.52□□□□□ -1.21
SIN3B-208ENST00000596638 OR2S2Q9NQN1 319 aa7.52□□□□□ -1.21
SIN3B-208ENST00000596638 GPR84Q9NQS5 396 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms