RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 OR13C3Q8NGS6 347 aa10.9□□□□□ -0.66
SCAF1-202ENST00000595242 OR51F2Q8NH61 342 aa10.9□□□□□ -0.66
SCAF1-202ENST00000595242 CLDND2Q8NHS1 167 aa10.9□□□□□ -0.66
SCAF1-202ENST00000595242 SLC25A28Q96A46 364 aa10.9□□□□□ -0.66
SCAF1-202ENST00000595242 LINC00470Q9BZP3 86 aa10.9□□□□□ -0.66
SCAF1-202ENST00000595242 NARFLQ9H6Q4 476 aa10.9□□□□□ -0.66
SCAF1-202ENST00000595242 ZNF275Q9NSD4 429 aaPredicted RBP10.9□□□□□ -0.66
SCAF1-202ENST00000595242 TAS2R4Q9NYW5 299 aa10.9□□□□□ -0.66
SCAF1-202ENST00000595242 FBXO9Q9UK97 447 aaPredicted RBP10.9□□□□□ -0.66
SCAF1-202ENST00000595242 RHBDD3Q9Y3P4 386 aa10.9□□□□□ -0.66
SCAF1-202ENST00000595242 P2RY10O00398 339 aa10.89□□□□□ -0.67
SCAF1-202ENST00000595242 RER1O15258 196 aa10.89□□□□□ -0.67
SCAF1-202ENST00000595242 MRPL33O75394 65 aaKnown RBP10.89□□□□□ -0.67
SCAF1-202ENST00000595242 HNRNPCP07910 306 aaKnown RBP eCLIP10.89□□□□□ -0.67
SCAF1-202ENST00000595242 CST2P09228 141 aa10.89□□□□□ -0.67
SCAF1-202ENST00000595242 TRAPPC2P0DI81 140 aa10.89□□□□□ -0.67
SCAF1-202ENST00000595242 TRAPPC2BP0DI82 140 aa10.89□□□□□ -0.67
SCAF1-202ENST00000595242 DDOSTP39656 456 aa10.89□□□□□ -0.67
SCAF1-202ENST00000595242 GUCA1AP43080 201 aaPredicted RBP10.89□□□□□ -0.67
SCAF1-202ENST00000595242 C1QTNF12Q5T7M4 302 aa10.89□□□□□ -0.67
SCAF1-202ENST00000595242 AAED1Q7RTV5 226 aa10.89□□□□□ -0.67
SCAF1-202ENST00000595242 PLPP7Q8NBV4 271 aa10.89□□□□□ -0.67
SCAF1-202ENST00000595242 CCDC54Q8NEL0 328 aa10.89□□□□□ -0.67
SCAF1-202ENST00000595242 DNAAF1Q8NEP3 725 aa10.89□□□□□ -0.67
SCAF1-202ENST00000595242 C1orf162Q8NEQ5 155 aaPredicted RBP10.89□□□□□ -0.67
SCAF1-202ENST00000595242 OR6M1Q8NGM8 313 aa10.89□□□□□ -0.67
SCAF1-202ENST00000595242 SYNPRQ8TBG9 265 aa10.89□□□□□ -0.67
SCAF1-202ENST00000595242 FOXRED1Q96CU9 486 aaPredicted RBP10.89□□□□□ -0.67
SCAF1-202ENST00000595242 S100A16Q96FQ6 103 aaKnown RBP10.89□□□□□ -0.67
SCAF1-202ENST00000595242 TRAV20A0A0B4J274 112 aa10.88□□□□□ -0.67
SCAF1-202ENST00000595242 IGHV1-18A0A0C4DH31 117 aa10.88□□□□□ -0.67
SCAF1-202ENST00000595242 POM121CA8CG34 1229 aa10.88□□□□□ -0.67
SCAF1-202ENST00000595242 GABARAPH6UMI1 98 aa10.88□□□□□ -0.67
SCAF1-202ENST00000595242 LDLRAD4O15165 306 aa10.88□□□□□ -0.67
SCAF1-202ENST00000595242 LANCL1O43813 399 aa10.88□□□□□ -0.67
SCAF1-202ENST00000595242 CRYAAP02489 173 aa10.88□□□□□ -0.67
SCAF1-202ENST00000595242 APOC1P02654 83 aa10.88□□□□□ -0.67
SCAF1-202ENST00000595242 CX3CR1P49238 355 aa10.88□□□□□ -0.67
SCAF1-202ENST00000595242 INPP1P49441 399 aa10.88□□□□□ -0.67
SCAF1-202ENST00000595242 CLDN12P56749 244 aa10.88□□□□□ -0.67
SCAF1-202ENST00000595242 ZNF121P58317 390 aaPredicted RBP10.88□□□□□ -0.67
SCAF1-202ENST00000595242 TGFBR3Q03167 851 aa10.88□□□□□ -0.67
SCAF1-202ENST00000595242 MADCAM1Q13477 382 aa10.88□□□□□ -0.67
SCAF1-202ENST00000595242 DYRK1AQ13627 763 aa10.88□□□□□ -0.67
SCAF1-202ENST00000595242 TAF13Q15543 124 aa10.88□□□□□ -0.67
SCAF1-202ENST00000595242 RAB11BQ15907 218 aa10.88□□□□□ -0.67
SCAF1-202ENST00000595242 SGCAQ16586 387 aa10.88□□□□□ -0.67
SCAF1-202ENST00000595242 KRTAP27-1Q3LI81 207 aa10.88□□□□□ -0.67
SCAF1-202ENST00000595242 SLC36A2Q495M3 483 aa10.88□□□□□ -0.67
SCAF1-202ENST00000595242 CCDC92Q53HC0 331 aaPredicted RBP10.88□□□□□ -0.67
SCAF1-202ENST00000595242 FBLN7Q53RD9 439 aa10.88□□□□□ -0.67
SCAF1-202ENST00000595242 ELFN2Q5R3F8 820 aa10.88□□□□□ -0.67
SCAF1-202ENST00000595242 ANKRD16Q6P6B7 361 aa10.88□□□□□ -0.67
SCAF1-202ENST00000595242 CDH26Q8IXH8 852 aa10.88□□□□□ -0.67
SCAF1-202ENST00000595242 OR8B12Q8NGG6 310 aa10.88□□□□□ -0.67
SCAF1-202ENST00000595242 ENKURQ8TC29 256 aa10.88□□□□□ -0.67
SCAF1-202ENST00000595242 PTX4Q96A99 478 aa10.88□□□□□ -0.67
SCAF1-202ENST00000595242 C1QTNF5Q9BXJ0 243 aa10.88□□□□□ -0.67
SCAF1-202ENST00000595242 HDHD2Q9H0R4 259 aa10.88□□□□□ -0.67
SCAF1-202ENST00000595242 RNF121Q9H920 327 aa10.88□□□□□ -0.67
SCAF1-202ENST00000595242 TMEM38BQ9NVV0 291 aa10.88□□□□□ -0.67
SCAF1-202ENST00000595242 TREM2Q9NZC2 230 aa10.88□□□□□ -0.67
SCAF1-202ENST00000595242 UPB1Q9UBR1 384 aa10.88□□□□□ -0.67
SCAF1-202ENST00000595242 RBMX2Q9Y388 322 aaKnown RBP10.88□□□□□ -0.67
SCAF1-202ENST00000595242 A0A0U1RQV5 110 aa10.87□□□□□ -0.67
SCAF1-202ENST00000595242 A0A1B0GVI7 797 aa10.87□□□□□ -0.67
SCAF1-202ENST00000595242 OR6C65A6NJZ3 312 aa10.87□□□□□ -0.67
SCAF1-202ENST00000595242 BOLA2-SMG1P6H3BVE0 249 aa10.87□□□□□ -0.67
SCAF1-202ENST00000595242 RPL36A-HNRNPH2H7BZ11 118 aa10.87□□□□□ -0.67
SCAF1-202ENST00000595242 WNT9BO14905 357 aa10.87□□□□□ -0.67
SCAF1-202ENST00000595242 SYT7O43581 403 aa10.87□□□□□ -0.67
SCAF1-202ENST00000595242 HTR2CP28335 458 aa10.87□□□□□ -0.67
SCAF1-202ENST00000595242 SLC6A1P30531 599 aa10.87□□□□□ -0.67
SCAF1-202ENST00000595242 BTCP35070 178 aa10.87□□□□□ -0.67
SCAF1-202ENST00000595242 RANBP1P43487 201 aa10.87□□□□□ -0.67
SCAF1-202ENST00000595242 DGCR2P98153 550 aa10.87□□□□□ -0.67
SCAF1-202ENST00000595242 KLF9Q13886 244 aaPredicted RBP10.87□□□□□ -0.67
SCAF1-202ENST00000595242 GPR176Q14439 515 aa10.87□□□□□ -0.67
SCAF1-202ENST00000595242 PLA1AQ53H76 456 aa10.87□□□□□ -0.67
SCAF1-202ENST00000595242 ZNF57Q68EA5 555 aaPredicted RBP10.87□□□□□ -0.67
SCAF1-202ENST00000595242 ZNF813Q6ZN06 617 aa10.87□□□□□ -0.67
SCAF1-202ENST00000595242 DOK3Q7L591 496 aa10.87□□□□□ -0.67
SCAF1-202ENST00000595242 C1QL2Q7Z5L3 287 aa10.87□□□□□ -0.67
SCAF1-202ENST00000595242 SERPINA12Q8IW75 414 aa10.87□□□□□ -0.67
SCAF1-202ENST00000595242 OR1J2Q8NGS2 313 aa10.87□□□□□ -0.67
SCAF1-202ENST00000595242 NANPQ8TBE9 248 aa10.87□□□□□ -0.67
SCAF1-202ENST00000595242 DEDD2Q8WXF8 326 aa10.87□□□□□ -0.67
SCAF1-202ENST00000595242 C22orf15Q8WYQ4 148 aa10.87□□□□□ -0.67
SCAF1-202ENST00000595242 FAM3DQ96BQ1 224 aa10.87□□□□□ -0.67
SCAF1-202ENST00000595242 MARVELD1Q9BSK0 173 aa10.87□□□□□ -0.67
SCAF1-202ENST00000595242 DYNLRB1Q9NP97 96 aa10.87□□□□□ -0.67
SCAF1-202ENST00000595242 CACNG2Q9Y698 323 aa10.87□□□□□ -0.67
SCAF1-202ENST00000595242 A0A0A6YYH2 397 aa10.86□□□□□ -0.67
SCAF1-202ENST00000595242 A6NIN4 97 aa10.86□□□□□ -0.67
SCAF1-202ENST00000595242 A6NJ64 397 aa10.86□□□□□ -0.67
SCAF1-202ENST00000595242 XRCC3O43542 346 aa10.86□□□□□ -0.67
SCAF1-202ENST00000595242 RAB6AP20340 208 aa10.86□□□□□ -0.67
SCAF1-202ENST00000595242 CDK2P24941 298 aa10.86□□□□□ -0.67
SCAF1-202ENST00000595242 BDKRB2P30411 391 aa10.86□□□□□ -0.67
SCAF1-202ENST00000595242 GPR6P46095 362 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms