RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 HAAOP46952 286 aa16.58■□□□□ 0.24
CIRBP-239ENST00000592467 DLX1P56177 255 aa16.58■□□□□ 0.24
CIRBP-239ENST00000592467 UBE2V2Q15819 145 aa16.58■□□□□ 0.24
CIRBP-239ENST00000592467 MEDAGQ5VYS4 303 aa16.58■□□□□ 0.24
CIRBP-239ENST00000592467 METAP1DQ6UB28 335 aaPredicted RBP16.58■□□□□ 0.24
CIRBP-239ENST00000592467 PIP4P2Q8N4L2 257 aa16.58■□□□□ 0.24
CIRBP-239ENST00000592467 CD177Q8N6Q3 437 aa16.58■□□□□ 0.24
CIRBP-239ENST00000592467 ZNRF1Q8ND25 227 aa16.58■□□□□ 0.24
CIRBP-239ENST00000592467 GATAD2BQ8WXI9 593 aa16.58■□□□□ 0.24
CIRBP-239ENST00000592467 TNFRSF14Q92956 283 aa16.58■□□□□ 0.24
CIRBP-239ENST00000592467 RNFT2Q96EX2 444 aa16.58■□□□□ 0.24
CIRBP-239ENST00000592467 NRIP2Q9BQI9 281 aa16.58■□□□□ 0.24
CIRBP-239ENST00000592467 ELL3Q9HB65 397 aaPredicted RBP16.58■□□□□ 0.24
CIRBP-239ENST00000592467 EXOGQ9Y2C4 368 aaKnown RBP16.58■□□□□ 0.24
CIRBP-239ENST00000592467 ORC6Q9Y5N6 252 aa16.58■□□□□ 0.24
CIRBP-239ENST00000592467 IGKV1-27A0A075B6S5 117 aa16.57■□□□□ 0.24
CIRBP-239ENST00000592467 H3BSH0 61 aa16.57■□□□□ 0.24
CIRBP-239ENST00000592467 ATP6V1E1P36543 226 aa16.57■□□□□ 0.24
CIRBP-239ENST00000592467 ERVK11-1P61568 191 aa16.57■□□□□ 0.24
CIRBP-239ENST00000592467 FDX2Q6P4F2 183 aa16.57■□□□□ 0.24
CIRBP-239ENST00000592467 ZNF573Q86YE8 665 aa16.57■□□□□ 0.24
CIRBP-239ENST00000592467 ENTHD1Q8IYW4 607 aa16.57■□□□□ 0.24
CIRBP-239ENST00000592467 RDH10Q8IZV5 341 aa16.57■□□□□ 0.24
CIRBP-239ENST00000592467 PQLC1Q8N2U9 271 aa16.57■□□□□ 0.24
CIRBP-239ENST00000592467 SLC25A28Q96A46 364 aa16.57■□□□□ 0.24
CIRBP-239ENST00000592467 C9orf16Q9BUW7 83 aa16.57■□□□□ 0.24
CIRBP-239ENST00000592467 NOX4Q9NPH5 578 aa16.57■□□□□ 0.24
CIRBP-239ENST00000592467 GNG8Q9UK08 70 aa16.57■□□□□ 0.24
CIRBP-239ENST00000592467 A0A1B0GVI7 797 aa16.56■□□□□ 0.24
CIRBP-239ENST00000592467 ANKRD61A6NGH8 418 aa16.56■□□□□ 0.24
CIRBP-239ENST00000592467 RNASEK-C17orf49H0YIS7 233 aa16.56■□□□□ 0.24
CIRBP-239ENST00000592467 SYT7O43581 403 aa16.56■□□□□ 0.24
CIRBP-239ENST00000592467 MELTFP08582 738 aa16.56■□□□□ 0.24
CIRBP-239ENST00000592467 GABRA2P47869 451 aa16.56■□□□□ 0.24
CIRBP-239ENST00000592467 NANOS3P60323 173 aaKnown RBP16.56■□□□□ 0.24
CIRBP-239ENST00000592467 ANGPTL5Q86XS5 388 aa16.56■□□□□ 0.24
CIRBP-239ENST00000592467 C10orf67Q8IYJ2 551 aa16.56■□□□□ 0.24
CIRBP-239ENST00000592467 OR2G2Q8NGZ5 317 aa16.56■□□□□ 0.24
CIRBP-239ENST00000592467 RHOXF1Q8NHV9 184 aa16.56■□□□□ 0.24
CIRBP-239ENST00000592467 H1FXQ92522 213 aaKnown RBP16.56■□□□□ 0.24
CIRBP-239ENST00000592467 LGALS12Q96DT0 336 aa16.56■□□□□ 0.24
CIRBP-239ENST00000592467 ZNF649Q9BS31 505 aa16.56■□□□□ 0.24
CIRBP-239ENST00000592467 FRRS1LQ9P0K9 344 aa16.56■□□□□ 0.24
CIRBP-239ENST00000592467 ONECUT1Q9UBC0 465 aa16.56■□□□□ 0.24
CIRBP-239ENST00000592467 NBEAL1Q6ZS30 2694 aa16.55■□□□□ 0.24
CIRBP-239ENST00000592467 A0A0U1RQK1 487 aa16.55■□□□□ 0.24
CIRBP-239ENST00000592467 LOC107986453A0A1B0GWG9 222 aa16.55■□□□□ 0.24
CIRBP-239ENST00000592467 RFPL4AA6NLU0 287 aa16.55■□□□□ 0.24
CIRBP-239ENST00000592467 RFPL4AL1F8VTS6 287 aa16.55■□□□□ 0.24
CIRBP-239ENST00000592467 OR12D2P58182 307 aa16.55■□□□□ 0.24
CIRBP-239ENST00000592467 ACTC1P68032 377 aa16.55■□□□□ 0.24
CIRBP-239ENST00000592467 ACTA1P68133 377 aa16.55■□□□□ 0.24
CIRBP-239ENST00000592467 PRB3Q04118 309 aaPredicted RBP16.55■□□□□ 0.24
CIRBP-239ENST00000592467 ZNF91Q05481 1191 aa16.55■□□□□ 0.24
CIRBP-239ENST00000592467 FOXL1Q12952 345 aa16.55■□□□□ 0.24
CIRBP-239ENST00000592467 IL24Q13007 206 aa16.55■□□□□ 0.24
CIRBP-239ENST00000592467 C16orf87Q6PH81 154 aa16.55■□□□□ 0.24
CIRBP-239ENST00000592467 C1orf122Q6ZSJ8 110 aa16.55■□□□□ 0.24
CIRBP-239ENST00000592467 PDZD9Q8IXQ8 264 aa16.55■□□□□ 0.24
CIRBP-239ENST00000592467 CCDC54Q8NEL0 328 aa16.55■□□□□ 0.24
CIRBP-239ENST00000592467 PKIBQ9C010 78 aa16.55■□□□□ 0.24
CIRBP-239ENST00000592467 CHST5Q9GZS9 411 aa16.55■□□□□ 0.24
CIRBP-239ENST00000592467 UNKLQ9H9P5 680 aaKnown RBP16.55■□□□□ 0.24
CIRBP-239ENST00000592467 SIRT7Q9NRC8 400 aa16.55■□□□□ 0.24
CIRBP-239ENST00000592467 GMPPBQ9Y5P6 360 aa16.55■□□□□ 0.24
CIRBP-239ENST00000592467 F8VVB4 439 aa16.54■□□□□ 0.24
CIRBP-239ENST00000592467 F8VWA3 439 aa16.54■□□□□ 0.24
CIRBP-239ENST00000592467 SLC16A6O15403 523 aa16.54■□□□□ 0.24
CIRBP-239ENST00000592467 ISG15P05161 165 aa16.54■□□□□ 0.24
CIRBP-239ENST00000592467 UBCP0CG48 685 aaKnown RBP16.54■□□□□ 0.24
CIRBP-239ENST00000592467 DBTP11182 482 aaKnown RBP16.54■□□□□ 0.24
CIRBP-239ENST00000592467 NDUFB7P17568 137 aa16.54■□□□□ 0.24
CIRBP-239ENST00000592467 CEBPDP49716 269 aaPredicted RBP16.54■□□□□ 0.24
CIRBP-239ENST00000592467 SMIM21Q3B7S5 101 aa16.54■□□□□ 0.24
CIRBP-239ENST00000592467 KCTD20Q7Z5Y7 419 aa16.54■□□□□ 0.24
CIRBP-239ENST00000592467 BATF2Q8N1L9 274 aa16.54■□□□□ 0.24
CIRBP-239ENST00000592467 C3orf56Q8N813 242 aa16.54■□□□□ 0.24
CIRBP-239ENST00000592467 TRMT10AQ8TBZ6 339 aaKnown RBP16.54■□□□□ 0.24
CIRBP-239ENST00000592467 ZDHHC16Q969W1 377 aa16.54■□□□□ 0.24
CIRBP-239ENST00000592467 C10orf35Q96D05 121 aa16.54■□□□□ 0.24
CIRBP-239ENST00000592467 ADAT3Q96EY9 351 aaPredicted RBP16.54■□□□□ 0.24
CIRBP-239ENST00000592467 PELI1Q96FA3 418 aa16.54■□□□□ 0.24
CIRBP-239ENST00000592467 FAM118AQ9NWS6 357 aa16.54■□□□□ 0.24
CIRBP-239ENST00000592467 POLDIP2Q9Y2S7 368 aa16.54■□□□□ 0.24
CIRBP-239ENST00000592467 IGKV1-9A0A0C4DH69 117 aa16.53■□□□□ 0.24
CIRBP-239ENST00000592467 DAPL1A0PJW8 107 aa16.53■□□□□ 0.24
CIRBP-239ENST00000592467 M0R1W7 72 aa16.53■□□□□ 0.24
CIRBP-239ENST00000592467 PRDX2P32119 198 aa16.53■□□□□ 0.24
CIRBP-239ENST00000592467 KLRD1Q13241 179 aa16.53■□□□□ 0.24
CIRBP-239ENST00000592467 HCP5Q6MZN7 132 aa16.53■□□□□ 0.24
CIRBP-239ENST00000592467 ZBTB49Q6ZSB9 765 aa16.53■□□□□ 0.24
CIRBP-239ENST00000592467 FAM220AQ7Z4H9 259 aa16.53■□□□□ 0.24
CIRBP-239ENST00000592467 LDLRAD3Q86YD5 345 aa16.53■□□□□ 0.24
CIRBP-239ENST00000592467 TMEM86BQ8N661 226 aa16.53■□□□□ 0.24
CIRBP-239ENST00000592467 ACBD7Q8N6N7 88 aa16.53■□□□□ 0.24
CIRBP-239ENST00000592467 NPRL2Q8WTW4 380 aa16.53■□□□□ 0.24
CIRBP-239ENST00000592467 APH1BQ8WW43 257 aa16.53■□□□□ 0.24
CIRBP-239ENST00000592467 ZNF747Q9BV97 191 aa16.53■□□□□ 0.24
CIRBP-239ENST00000592467 CHIAQ9BZP6 476 aa16.53■□□□□ 0.24
CIRBP-239ENST00000592467 C19orf12Q9NSK7 152 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms