RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 CHST5Q9GZS9 411 aa11.56□□□□□ -0.56
CLIP3-205ENST00000592017 ESM1Q9NQ30 184 aa11.56□□□□□ -0.56
CLIP3-205ENST00000592017 NLKQ9UBE8 527 aa11.56□□□□□ -0.56
CLIP3-205ENST00000592017 IGHV3OR16-10A0A075B7F0 116 aa11.55□□□□□ -0.56
CLIP3-205ENST00000592017 IRGMA1A4Y4 181 aa11.55□□□□□ -0.56
CLIP3-205ENST00000592017 H0YAE9 185 aa11.55□□□□□ -0.56
CLIP3-205ENST00000592017 H0YHG0 523 aa11.55□□□□□ -0.56
CLIP3-205ENST00000592017 TNFRSF13BO14836 293 aaPredicted RBP11.55□□□□□ -0.56
CLIP3-205ENST00000592017 SERPINA3P01011 423 aa11.55□□□□□ -0.56
CLIP3-205ENST00000592017 SELLP14151 372 aa11.55□□□□□ -0.56
CLIP3-205ENST00000592017 MYL12AP19105 171 aa11.55□□□□□ -0.56
CLIP3-205ENST00000592017 GABRA2P47869 451 aa11.55□□□□□ -0.56
CLIP3-205ENST00000592017 CCR9P51686 369 aa11.55□□□□□ -0.56
CLIP3-205ENST00000592017 CNN3Q15417 329 aaKnown RBP11.55□□□□□ -0.56
CLIP3-205ENST00000592017 UBE2V2Q15819 145 aa11.55□□□□□ -0.56
CLIP3-205ENST00000592017 CD276Q5ZPR3 534 aa11.55□□□□□ -0.56
CLIP3-205ENST00000592017 ANGPTL5Q86XS5 388 aa11.55□□□□□ -0.56
CLIP3-205ENST00000592017 BPIFB2Q8N4F0 458 aa11.55□□□□□ -0.56
CLIP3-205ENST00000592017 ZDHHC22Q8N966 263 aa11.55□□□□□ -0.56
CLIP3-205ENST00000592017 OR51A4Q8NGJ6 313 aa11.55□□□□□ -0.56
CLIP3-205ENST00000592017 DACT3Q96B18 629 aaPredicted RBP11.55□□□□□ -0.56
CLIP3-205ENST00000592017 FGGYQ96C11 551 aa11.55□□□□□ -0.56
CLIP3-205ENST00000592017 ADAT3Q96EY9 351 aaPredicted RBP11.55□□□□□ -0.56
CLIP3-205ENST00000592017 ZNF649Q9BS31 505 aa11.55□□□□□ -0.56
CLIP3-205ENST00000592017 FGF20Q9NP95 211 aaPredicted RBP11.55□□□□□ -0.56
CLIP3-205ENST00000592017 KAAG1Q9UBP8 84 aa11.55□□□□□ -0.56
CLIP3-205ENST00000592017 ZNF69Q9UC07 566 aa11.55□□□□□ -0.56
CLIP3-205ENST00000592017 HHLA2Q9UM44 414 aa11.55□□□□□ -0.56
CLIP3-205ENST00000592017 POLDIP2Q9Y2S7 368 aa11.55□□□□□ -0.56
CLIP3-205ENST00000592017 OR4C45A6NMZ5 311 aa11.54□□□□□ -0.56
CLIP3-205ENST00000592017 OR2AT4A6NND4 320 aa11.54□□□□□ -0.56
CLIP3-205ENST00000592017 E9PI62 339 aa11.54□□□□□ -0.56
CLIP3-205ENST00000592017 NDUFB3O43676 98 aa11.54□□□□□ -0.56
CLIP3-205ENST00000592017 FCN3O75636 299 aa11.54□□□□□ -0.56
CLIP3-205ENST00000592017 INMTO95050 263 aa11.54□□□□□ -0.56
CLIP3-205ENST00000592017 ISG15P05161 165 aa11.54□□□□□ -0.56
CLIP3-205ENST00000592017 CCDC159P0C7I6 412 aa11.54□□□□□ -0.56
CLIP3-205ENST00000592017 OCM2P0CE71 109 aa11.54□□□□□ -0.56
CLIP3-205ENST00000592017 OCMP0CE72 109 aaPredicted RBP11.54□□□□□ -0.56
CLIP3-205ENST00000592017 LIMS3P0CW19 117 aa11.54□□□□□ -0.56
CLIP3-205ENST00000592017 LIMS4P0CW20 117 aa11.54□□□□□ -0.56
CLIP3-205ENST00000592017 DCKP27707 260 aa11.54□□□□□ -0.56
CLIP3-205ENST00000592017 ETV1P50549 477 aa11.54□□□□□ -0.56
CLIP3-205ENST00000592017 FGF12P61328 243 aa11.54□□□□□ -0.56
CLIP3-205ENST00000592017 OR2G6Q5TZ20 316 aa11.54□□□□□ -0.56
CLIP3-205ENST00000592017 BTN2A1Q7KYR7 527 aa11.54□□□□□ -0.56
CLIP3-205ENST00000592017 CALHM1Q8IU99 346 aa11.54□□□□□ -0.56
CLIP3-205ENST00000592017 BCL6BQ8N143 479 aaPredicted RBP11.54□□□□□ -0.56
CLIP3-205ENST00000592017 POC1AQ8NBT0 407 aa11.54□□□□□ -0.56
CLIP3-205ENST00000592017 OR5AK2Q8NH90 309 aa11.54□□□□□ -0.56
CLIP3-205ENST00000592017 FAM216AQ8WUB2 273 aa11.54□□□□□ -0.56
CLIP3-205ENST00000592017 TSEN15Q8WW01 171 aaKnown RBP11.54□□□□□ -0.56
CLIP3-205ENST00000592017 NRG4Q8WWG1 115 aa11.54□□□□□ -0.56
CLIP3-205ENST00000592017 PP6455Q8WZ26 134 aa11.54□□□□□ -0.56
CLIP3-205ENST00000592017 H1FXQ92522 213 aaKnown RBP11.54□□□□□ -0.56
CLIP3-205ENST00000592017 C10orf35Q96D05 121 aa11.54□□□□□ -0.56
CLIP3-205ENST00000592017 BORCS8Q96FH0 119 aa11.54□□□□□ -0.56
CLIP3-205ENST00000592017 GAFA1Q96PS6 74 aa11.54□□□□□ -0.56
CLIP3-205ENST00000592017 PDCD1LG2Q9BQ51 273 aa11.54□□□□□ -0.56
CLIP3-205ENST00000592017 SUCNR1Q9BXA5 334 aa11.54□□□□□ -0.56
CLIP3-205ENST00000592017 COMMD4Q9H0A8 199 aa11.54□□□□□ -0.56
CLIP3-205ENST00000592017 NUP50Q9UKX7 468 aa11.54□□□□□ -0.56
CLIP3-205ENST00000592017 SOX21Q9Y651 276 aaPredicted RBP11.54□□□□□ -0.56
CLIP3-205ENST00000592017 HSPE1-MOB4S4R3N1 261 aa11.54□□□□□ -0.56
CLIP3-205ENST00000592017 TRAV40A0A0B4J280 105 aa11.53□□□□□ -0.56
CLIP3-205ENST00000592017 KIR2DS1A0A191URI9 304 aa11.53□□□□□ -0.56
CLIP3-205ENST00000592017 TMEM212A6NML5 194 aa11.53□□□□□ -0.56
CLIP3-205ENST00000592017 NXPH2O95156 264 aa11.53□□□□□ -0.56
CLIP3-205ENST00000592017 PGA5P0DJD9 388 aa11.53□□□□□ -0.56
CLIP3-205ENST00000592017 AMY2BP19961 511 aa11.53□□□□□ -0.56
CLIP3-205ENST00000592017 FPR2P25090 351 aa11.53□□□□□ -0.56
CLIP3-205ENST00000592017 FUT6P51993 359 aa11.53□□□□□ -0.56
CLIP3-205ENST00000592017 GTF2A1P52655 376 aaPredicted RBP11.53□□□□□ -0.56
CLIP3-205ENST00000592017 AQP4P55087 323 aa11.53□□□□□ -0.56
CLIP3-205ENST00000592017 IL13RA1P78552 427 aa11.53□□□□□ -0.56
CLIP3-205ENST00000592017 MRPL28Q13084 256 aaKnown RBP11.53□□□□□ -0.56
CLIP3-205ENST00000592017 MED21Q13503 144 aa11.53□□□□□ -0.56
CLIP3-205ENST00000592017 SMIM21Q3B7S5 101 aa11.53□□□□□ -0.56
CLIP3-205ENST00000592017 LRRC10Q5BKY1 277 aa11.53□□□□□ -0.56
CLIP3-205ENST00000592017 TMPRSS11AQ6ZMR5 421 aa11.53□□□□□ -0.56
CLIP3-205ENST00000592017 SIGLECL1Q8N7X8 197 aa11.53□□□□□ -0.56
CLIP3-205ENST00000592017 ANGPTL6Q8NI99 470 aa11.53□□□□□ -0.56
CLIP3-205ENST00000592017 TMEM80Q96HE8 168 aa11.53□□□□□ -0.56
CLIP3-205ENST00000592017 PCGF1Q9BSM1 259 aa11.53□□□□□ -0.56
CLIP3-205ENST00000592017 JAM3Q9BX67 310 aa11.53□□□□□ -0.56
CLIP3-205ENST00000592017 CHCHD3Q9NX63 227 aaKnown RBP11.53□□□□□ -0.56
CLIP3-205ENST00000592017 DIMT1Q9UNQ2 313 aaKnown RBP11.53□□□□□ -0.56
CLIP3-205ENST00000592017 CAB39Q9Y376 341 aaPredicted RBP11.53□□□□□ -0.56
CLIP3-205ENST00000592017 EXOSC1Q9Y3B2 195 aaKnown RBP11.53□□□□□ -0.56
CLIP3-205ENST00000592017 IGKV1D-17A0A075B6S4 117 aa11.52□□□□□ -0.57
CLIP3-205ENST00000592017 IGKV1-27A0A075B6S5 117 aa11.52□□□□□ -0.57
CLIP3-205ENST00000592017 TRBV2A0A0J9YWF9 115 aa11.52□□□□□ -0.57
CLIP3-205ENST00000592017 TRIM77I1YAP6 450 aa11.52□□□□□ -0.57
CLIP3-205ENST00000592017 XPNPEP2O43895 674 aa11.52□□□□□ -0.57
CLIP3-205ENST00000592017 ZFPL1O95159 310 aa11.52□□□□□ -0.57
CLIP3-205ENST00000592017 IGHV4-38-2P0DP08 117 aa11.52□□□□□ -0.57
CLIP3-205ENST00000592017 PSG2P11465 335 aa11.52□□□□□ -0.57
CLIP3-205ENST00000592017 NDUFB7P17568 137 aa11.52□□□□□ -0.57
CLIP3-205ENST00000592017 ATF1P18846 271 aa11.52□□□□□ -0.57
CLIP3-205ENST00000592017 AZGP1P25311 298 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms