RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 SYNGR1O43759 233 aa22.48■■□□□ 1.19
SMAD4-213ENST00000591914 NOS1APO75052 506 aaPredicted RBP22.48■■□□□ 1.19
SMAD4-213ENST00000591914 IGHA1P01876 353 aa22.48■■□□□ 1.19
SMAD4-213ENST00000591914 BPIFB3P59826 476 aa22.48■■□□□ 1.19
SMAD4-213ENST00000591914 NANOS3P60323 173 aaKnown RBP22.48■■□□□ 1.19
SMAD4-213ENST00000591914 UBA52P62987 128 aaKnown RBP22.48■■□□□ 1.19
SMAD4-213ENST00000591914 UBE2V2Q15819 145 aa22.48■■□□□ 1.19
SMAD4-213ENST00000591914 GPR157Q5UAW9 335 aa22.48■■□□□ 1.19
SMAD4-213ENST00000591914 RDH10Q8IZV5 341 aa22.48■■□□□ 1.19
SMAD4-213ENST00000591914 C8orf46Q8TAG6 207 aa22.48■■□□□ 1.19
SMAD4-213ENST00000591914 APH1BQ8WW43 257 aa22.48■■□□□ 1.19
SMAD4-213ENST00000591914 PELI1Q96FA3 418 aa22.48■■□□□ 1.19
SMAD4-213ENST00000591914 DCTN5Q9BTE1 182 aa22.48■■□□□ 1.19
SMAD4-213ENST00000591914 CHST5Q9GZS9 411 aa22.48■■□□□ 1.19
SMAD4-213ENST00000591914 AMBNQ9NP70 447 aa22.48■■□□□ 1.19
SMAD4-213ENST00000591914 MYRFQ9Y2G1 1151 aa22.48■■□□□ 1.19
SMAD4-213ENST00000591914 SOX21Q9Y651 276 aaPredicted RBP22.48■■□□□ 1.19
SMAD4-213ENST00000591914 FADS2O95864 444 aaKnown RBP22.47■■□□□ 1.19
SMAD4-213ENST00000591914 ISG15P05161 165 aa22.47■■□□□ 1.19
SMAD4-213ENST00000591914 CCR9P51686 369 aa22.47■■□□□ 1.19
SMAD4-213ENST00000591914 CAV3P56539 151 aa22.47■■□□□ 1.19
SMAD4-213ENST00000591914 ARF6P62330 175 aa22.47■■□□□ 1.19
SMAD4-213ENST00000591914 RAB40BQ12829 278 aa22.47■■□□□ 1.19
SMAD4-213ENST00000591914 GALEQ14376 348 aa22.47■■□□□ 1.19
SMAD4-213ENST00000591914 SMIM21Q3B7S5 101 aa22.47■■□□□ 1.19
SMAD4-213ENST00000591914 TMEM244Q5VVB8 128 aa22.47■■□□□ 1.19
SMAD4-213ENST00000591914 BRD3OSQ6XYD6 125 aa22.47■■□□□ 1.19
SMAD4-213ENST00000591914 ACP7Q6ZNF0 438 aa22.47■■□□□ 1.19
SMAD4-213ENST00000591914 CALHM1Q8IU99 346 aa22.47■■□□□ 1.19
SMAD4-213ENST00000591914 ZNF555Q8NEP9 628 aa22.47■■□□□ 1.19
SMAD4-213ENST00000591914 MRPL48Q96GC5 212 aaKnown RBP22.47■■□□□ 1.19
SMAD4-213ENST00000591914 C4orf36Q96KX1 117 aa22.47■■□□□ 1.19
SMAD4-213ENST00000591914 C1orf147Q96MC9 270 aaPredicted RBP22.47■■□□□ 1.19
SMAD4-213ENST00000591914 ZNF488Q96MN9 340 aa22.47■■□□□ 1.19
SMAD4-213ENST00000591914 NRIP2Q9BQI9 281 aa22.47■■□□□ 1.19
SMAD4-213ENST00000591914 MRPS18AQ9NVS2 196 aaKnown RBP22.47■■□□□ 1.19
SMAD4-213ENST00000591914 SLC25A10Q9UBX3 287 aaPredicted RBP22.47■■□□□ 1.19
SMAD4-213ENST00000591914 SLC7A11Q9UPY5 501 aa22.47■■□□□ 1.19
SMAD4-213ENST00000591914 KPTNQ9Y664 436 aa22.47■■□□□ 1.19
SMAD4-213ENST00000591914 J3QLW9 94 aa22.46■■□□□ 1.19
SMAD4-213ENST00000591914 GATBO75879 557 aaKnown RBP22.46■■□□□ 1.19
SMAD4-213ENST00000591914 ZNF19P17023 458 aa22.46■■□□□ 1.19
SMAD4-213ENST00000591914 PDCD1Q15116 288 aa22.46■■□□□ 1.19
SMAD4-213ENST00000591914 LHFPL3Q86UP9 236 aa22.46■■□□□ 1.19
SMAD4-213ENST00000591914 EGFL6Q8IUX8 553 aa22.46■■□□□ 1.19
SMAD4-213ENST00000591914 TRMT10AQ8TBZ6 339 aaKnown RBP22.46■■□□□ 1.19
SMAD4-213ENST00000591914 PP6455Q8WZ26 134 aa22.46■■□□□ 1.19
SMAD4-213ENST00000591914 SDSLQ96GA7 329 aa22.46■■□□□ 1.19
SMAD4-213ENST00000591914 MYCBPQ99417 103 aaPredicted RBP22.46■■□□□ 1.19
SMAD4-213ENST00000591914 ZNF649Q9BS31 505 aa22.46■■□□□ 1.19
SMAD4-213ENST00000591914 ALG8Q9BVK2 526 aa22.46■■□□□ 1.19
SMAD4-213ENST00000591914 PKIBQ9C010 78 aa22.46■■□□□ 1.19
SMAD4-213ENST00000591914 INPP5EQ9NRR6 644 aa22.46■■□□□ 1.19
SMAD4-213ENST00000591914 RPL36Q9Y3U8 105 aaKnown RBP22.46■■□□□ 1.19
SMAD4-213ENST00000591914 CENPVL3A0A0U1RRI6 287 aa22.45■■□□□ 1.18
SMAD4-213ENST00000591914 DNAJC9-AS1A6NH13 148 aa22.45■■□□□ 1.18
SMAD4-213ENST00000591914 HTR1AP08908 422 aa22.45■■□□□ 1.18
SMAD4-213ENST00000591914 GABRA2P47869 451 aa22.45■■□□□ 1.18
SMAD4-213ENST00000591914 IL24Q13007 206 aa22.45■■□□□ 1.18
SMAD4-213ENST00000591914 RCN1Q15293 331 aa22.45■■□□□ 1.18
SMAD4-213ENST00000591914 LRRC36Q1X8D7 754 aa22.45■■□□□ 1.18
SMAD4-213ENST00000591914 ANGPTL5Q86XS5 388 aa22.45■■□□□ 1.18
SMAD4-213ENST00000591914 SYS1Q8N2H4 156 aa22.45■■□□□ 1.18
SMAD4-213ENST00000591914 HES4Q9HCC6 221 aa22.45■■□□□ 1.18
SMAD4-213ENST00000591914 C8orf4Q9NR00 106 aa22.45■■□□□ 1.18
SMAD4-213ENST00000591914 MAB21L2Q9Y586 359 aa22.45■■□□□ 1.18
SMAD4-213ENST00000591914 FAM230AA0A1W2PPH8 454 aa22.44■■□□□ 1.18
SMAD4-213ENST00000591914 WBP4O75554 376 aaKnown RBP22.44■■□□□ 1.18
SMAD4-213ENST00000591914 SERPINA3P01011 423 aa22.44■■□□□ 1.18
SMAD4-213ENST00000591914 PRTN3P24158 256 aa22.44■■□□□ 1.18
SMAD4-213ENST00000591914 FUT6P51993 359 aa22.44■■□□□ 1.18
SMAD4-213ENST00000591914 ERVK11-1P61568 191 aa22.44■■□□□ 1.18
SMAD4-213ENST00000591914 ACTG1P63261 375 aa22.44■■□□□ 1.18
SMAD4-213ENST00000591914 BAMBIQ13145 260 aa22.44■■□□□ 1.18
SMAD4-213ENST00000591914 LPCAT4Q643R3 524 aa22.44■■□□□ 1.18
SMAD4-213ENST00000591914 KIR3DL3Q8N743 410 aa22.44■■□□□ 1.18
SMAD4-213ENST00000591914 PACRGLQ8N7B6 248 aa22.44■■□□□ 1.18
SMAD4-213ENST00000591914 ZNRF1Q8ND25 227 aa22.44■■□□□ 1.18
SMAD4-213ENST00000591914 OR52I1Q8NGK6 324 aa22.44■■□□□ 1.18
SMAD4-213ENST00000591914 NPRL2Q8WTW4 380 aa22.44■■□□□ 1.18
SMAD4-213ENST00000591914 H1FXQ92522 213 aaKnown RBP22.44■■□□□ 1.18
SMAD4-213ENST00000591914 ADAT3Q96EY9 351 aaPredicted RBP22.44■■□□□ 1.18
SMAD4-213ENST00000591914 PRDM13Q9H4Q3 707 aa22.44■■□□□ 1.18
SMAD4-213ENST00000591914 ZMAT3Q9HA38 289 aaKnown RBP22.44■■□□□ 1.18
SMAD4-213ENST00000591914 ERVK13-1Q9NX77 482 aa22.44■■□□□ 1.18
SMAD4-213ENST00000591914 IGKV1-27A0A075B6S5 117 aa22.43■■□□□ 1.18
SMAD4-213ENST00000591914 OR4C45A6NMZ5 311 aa22.43■■□□□ 1.18
SMAD4-213ENST00000591914 KLHL22Q53GT1 634 aa22.43■■□□□ 1.18
SMAD4-213ENST00000591914 RUSC1-AS1Q66K80 236 aa22.43■■□□□ 1.18
SMAD4-213ENST00000591914 ISG20L2Q9H9L3 353 aaKnown RBP22.43■■□□□ 1.18
SMAD4-213ENST00000591914 ONECUT1Q9UBC0 465 aa22.43■■□□□ 1.18
SMAD4-213ENST00000591914 TENM1Q9UKZ4 2725 aa22.43■■□□□ 1.18
SMAD4-213ENST00000591914 TMEM89A2RUT3 159 aa22.42■■□□□ 1.18
SMAD4-213ENST00000591914 RFPL4AA6NLU0 287 aa22.42■■□□□ 1.18
SMAD4-213ENST00000591914 RFPL4AL1F8VTS6 287 aa22.42■■□□□ 1.18
SMAD4-213ENST00000591914 CLDN34H7C241 214 aa22.42■■□□□ 1.18
SMAD4-213ENST00000591914 NXPH2O95156 264 aa22.42■■□□□ 1.18
SMAD4-213ENST00000591914 NDUFB7P17568 137 aa22.42■■□□□ 1.18
SMAD4-213ENST00000591914 PEX2P28328 305 aa22.42■■□□□ 1.18
SMAD4-213ENST00000591914 ALKBH1Q13686 389 aaKnown RBP22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms