RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 TMEM244Q5VVB8 128 aa9.99□□□□□ -0.81
TPM4-212ENST00000590180 Q6ZSR3 168 aa9.99□□□□□ -0.81
TPM4-212ENST00000590180 BATF2Q8N1L9 274 aa9.99□□□□□ -0.81
TPM4-212ENST00000590180 FAM216AQ8WUB2 273 aa9.99□□□□□ -0.81
TPM4-212ENST00000590180 LHX4Q969G2 390 aa9.99□□□□□ -0.81
TPM4-212ENST00000590180 GAFA1Q96PS6 74 aa9.99□□□□□ -0.81
TPM4-212ENST00000590180 TBX15Q96SF7 602 aa9.99□□□□□ -0.81
TPM4-212ENST00000590180 ALG8Q9BVK2 526 aa9.99□□□□□ -0.81
TPM4-212ENST00000590180 ESM1Q9NQ30 184 aa9.99□□□□□ -0.81
TPM4-212ENST00000590180 SMPD3Q9NY59 655 aaPredicted RBP9.99□□□□□ -0.81
TPM4-212ENST00000590180 ONECUT1Q9UBC0 465 aa9.99□□□□□ -0.81
TPM4-212ENST00000590180 SLC25A10Q9UBX3 287 aaPredicted RBP9.99□□□□□ -0.81
TPM4-212ENST00000590180 POLDIP2Q9Y2S7 368 aa9.99□□□□□ -0.81
TPM4-212ENST00000590180 RPL36Q9Y3U8 105 aaKnown RBP9.99□□□□□ -0.81
TPM4-212ENST00000590180 LOC107986453A0A1B0GWG9 222 aa9.98□□□□□ -0.81
TPM4-212ENST00000590180 RFPL4AA6NLU0 287 aa9.98□□□□□ -0.81
TPM4-212ENST00000590180 ANKRD65E5RJM6 399 aa9.98□□□□□ -0.81
TPM4-212ENST00000590180 RFPL4AL1F8VTS6 287 aa9.98□□□□□ -0.81
TPM4-212ENST00000590180 SIGLEC5O15389 551 aa9.98□□□□□ -0.81
TPM4-212ENST00000590180 GATBO75879 557 aaKnown RBP9.98□□□□□ -0.81
TPM4-212ENST00000590180 NXPH2O95156 264 aa9.98□□□□□ -0.81
TPM4-212ENST00000590180 PLATP00750 562 aa9.98□□□□□ -0.81
TPM4-212ENST00000590180 UBCP0CG48 685 aaKnown RBP9.98□□□□□ -0.81
TPM4-212ENST00000590180 FUT6P51993 359 aa9.98□□□□□ -0.81
TPM4-212ENST00000590180 ISL1P61371 349 aa9.98□□□□□ -0.81
TPM4-212ENST00000590180 UBA52P62987 128 aaKnown RBP9.98□□□□□ -0.81
TPM4-212ENST00000590180 PDCD1Q15116 288 aa9.98□□□□□ -0.81
TPM4-212ENST00000590180 UBE2V2Q15819 145 aa9.98□□□□□ -0.81
TPM4-212ENST00000590180 DGUOKQ16854 277 aa9.98□□□□□ -0.81
TPM4-212ENST00000590180 KLHL22Q53GT1 634 aa9.98□□□□□ -0.81
TPM4-212ENST00000590180 LPCAT4Q643R3 524 aa9.98□□□□□ -0.81
TPM4-212ENST00000590180 ACP7Q6ZNF0 438 aa9.98□□□□□ -0.81
TPM4-212ENST00000590180 PDZD9Q8IXQ8 264 aa9.98□□□□□ -0.81
TPM4-212ENST00000590180 CMTM4Q8IZR5 234 aa9.98□□□□□ -0.81
TPM4-212ENST00000590180 POC1AQ8NBT0 407 aa9.98□□□□□ -0.81
TPM4-212ENST00000590180 ZNRF1Q8ND25 227 aa9.98□□□□□ -0.81
TPM4-212ENST00000590180 TMEM185AQ8NFB2 350 aa9.98□□□□□ -0.81
TPM4-212ENST00000590180 FGGYQ96C11 551 aa9.98□□□□□ -0.81
TPM4-212ENST00000590180 C4orf36Q96KX1 117 aa9.98□□□□□ -0.81
TPM4-212ENST00000590180 ZNF48Q96MX3 618 aaPredicted RBP9.98□□□□□ -0.81
TPM4-212ENST00000590180 DCTN5Q9BTE1 182 aa9.98□□□□□ -0.81
TPM4-212ENST00000590180 FRRS1LQ9P0K9 344 aa9.98□□□□□ -0.81
TPM4-212ENST00000590180 MYRFQ9Y2G1 1151 aa9.98□□□□□ -0.81
TPM4-212ENST00000590180 IGKV1D-17A0A075B6S4 117 aa9.97□□□□□ -0.81
TPM4-212ENST00000590180 CENPVL3A0A0U1RRI6 287 aa9.97□□□□□ -0.81
TPM4-212ENST00000590180 A0A1W2PQ09 198 aa9.97□□□□□ -0.81
TPM4-212ENST00000590180 OCM2P0CE71 109 aa9.97□□□□□ -0.81
TPM4-212ENST00000590180 OCMP0CE72 109 aaPredicted RBP9.97□□□□□ -0.81
TPM4-212ENST00000590180 PGA5P0DJD9 388 aa9.97□□□□□ -0.81
TPM4-212ENST00000590180 MMP9P14780 707 aa9.97□□□□□ -0.81
TPM4-212ENST00000590180 ZNF20P17024 532 aa9.97□□□□□ -0.81
TPM4-212ENST00000590180 PRTN3P24158 256 aa9.97□□□□□ -0.81
TPM4-212ENST00000590180 PRDX2P32119 198 aa9.97□□□□□ -0.81
TPM4-212ENST00000590180 BPIFB3P59826 476 aa9.97□□□□□ -0.81
TPM4-212ENST00000590180 NANOS3P60323 173 aaKnown RBP9.97□□□□□ -0.81
TPM4-212ENST00000590180 ACTA2P62736 377 aa9.97□□□□□ -0.81
TPM4-212ENST00000590180 ACTG2P63267 376 aa9.97□□□□□ -0.81
TPM4-212ENST00000590180 RAB40BQ12829 278 aa9.97□□□□□ -0.81
TPM4-212ENST00000590180 GALEQ14376 348 aa9.97□□□□□ -0.81
TPM4-212ENST00000590180 RCN1Q15293 331 aa9.97□□□□□ -0.81
TPM4-212ENST00000590180 DEFB112Q30KQ8 113 aa9.97□□□□□ -0.81
TPM4-212ENST00000590180 SMIM21Q3B7S5 101 aa9.97□□□□□ -0.81
TPM4-212ENST00000590180 RUSC1-AS1Q66K80 236 aa9.97□□□□□ -0.81
TPM4-212ENST00000590180 FDX2Q6P4F2 183 aa9.97□□□□□ -0.81
TPM4-212ENST00000590180 C9orf139Q6ZV77 190 aa9.97□□□□□ -0.81
TPM4-212ENST00000590180 CALHM1Q8IU99 346 aa9.97□□□□□ -0.81
TPM4-212ENST00000590180 ZNF676Q8N7Q3 588 aa9.97□□□□□ -0.81
TPM4-212ENST00000590180 LY6G5BQ8NDX9 201 aa9.97□□□□□ -0.81
TPM4-212ENST00000590180 CYGBQ8WWM9 190 aa9.97□□□□□ -0.81
TPM4-212ENST00000590180 GATAD2BQ8WXI9 593 aa9.97□□□□□ -0.81
TPM4-212ENST00000590180 RNF166Q96A37 237 aaPredicted RBP9.97□□□□□ -0.81
TPM4-212ENST00000590180 C10orf35Q96D05 121 aa9.97□□□□□ -0.81
TPM4-212ENST00000590180 PELI1Q96FA3 418 aa9.97□□□□□ -0.81
TPM4-212ENST00000590180 BORCS8Q96FH0 119 aa9.97□□□□□ -0.81
TPM4-212ENST00000590180 RDH12Q96NR8 316 aa9.97□□□□□ -0.81
TPM4-212ENST00000590180 SIRPDQ9H106 197 aa9.97□□□□□ -0.81
TPM4-212ENST00000590180 OR14J1Q9UGF5 321 aa9.97□□□□□ -0.81
TPM4-212ENST00000590180 MAB21L2Q9Y586 359 aa9.97□□□□□ -0.81
TPM4-212ENST00000590180 KPTNQ9Y664 436 aa9.97□□□□□ -0.81
TPM4-212ENST00000590180 MDFIC2A0A1B0GVS7 189 aa9.96□□□□□ -0.82
TPM4-212ENST00000590180 DNAJC9-AS1A6NH13 148 aa9.96□□□□□ -0.82
TPM4-212ENST00000590180 HAX1O00165 279 aa9.96□□□□□ -0.82
TPM4-212ENST00000590180 NOS1APO75052 506 aaPredicted RBP9.96□□□□□ -0.82
TPM4-212ENST00000590180 CLIC3O95833 236 aa9.96□□□□□ -0.82
TPM4-212ENST00000590180 ATF1P18846 271 aa9.96□□□□□ -0.82
TPM4-212ENST00000590180 CCR9P51686 369 aa9.96□□□□□ -0.82
TPM4-212ENST00000590180 GBX2P52951 348 aaPredicted RBP9.96□□□□□ -0.82
TPM4-212ENST00000590180 ATP1B3P54709 279 aa9.96□□□□□ -0.82
TPM4-212ENST00000590180 MTCP1P56278 107 aa9.96□□□□□ -0.82
TPM4-212ENST00000590180 IL24Q13007 206 aa9.96□□□□□ -0.82
TPM4-212ENST00000590180 ALKBH1Q13686 389 aaKnown RBP9.96□□□□□ -0.82
TPM4-212ENST00000590180 CNN3Q15417 329 aaKnown RBP9.96□□□□□ -0.82
TPM4-212ENST00000590180 SMN1Q16637 294 aaKnown RBP9.96□□□□□ -0.82
TPM4-212ENST00000590180 TTC23Q5W5X9 447 aa9.96□□□□□ -0.82
TPM4-212ENST00000590180 VMO1Q7Z5L0 202 aa9.96□□□□□ -0.82
TPM4-212ENST00000590180 DHRSXQ8N5I4 330 aa9.96□□□□□ -0.82
TPM4-212ENST00000590180 CD177Q8N6Q3 437 aa9.96□□□□□ -0.82
TPM4-212ENST00000590180 OR52I1Q8NGK6 324 aa9.96□□□□□ -0.82
TPM4-212ENST00000590180 APH1BQ8WW43 257 aa9.96□□□□□ -0.82
TPM4-212ENST00000590180 PP6455Q8WZ26 134 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms