RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 TMED9Q9BVK6 235 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 RAB1BQ9H0U4 201 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 OR51J1Q9H342 316 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 DPAGT1Q9H3H5 408 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 KRCC1Q9NPI7 259 aaPredicted RBP6.51□□□□□ -1.37
SMAD4-209ENST00000589941 TRIM36Q9NQ86 728 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 CMC2Q9NRP2 79 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 GLTPQ9NZD2 209 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 MGAT4CQ9UBM8 478 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 STEAP1Q9UHE8 339 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 FBXL3Q9UKT7 428 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 ING4Q9UNL4 249 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 BAIAP2Q9UQB8 552 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 KCNE3Q9Y6H6 103 aa6.51□□□□□ -1.37
SMAD4-209ENST00000589941 OR6C65A6NJZ3 312 aa6.5□□□□□ -1.37
SMAD4-209ENST00000589941 DUXAA6NLW8 204 aa6.5□□□□□ -1.37
SMAD4-209ENST00000589941 EFNA2O43921 213 aa6.5□□□□□ -1.37
SMAD4-209ENST00000589941 PRAF2O60831 178 aa6.5□□□□□ -1.37
SMAD4-209ENST00000589941 ERAL1O75616 437 aaKnown RBP6.5□□□□□ -1.37
SMAD4-209ENST00000589941 MPZL1O95297 269 aa6.5□□□□□ -1.37
SMAD4-209ENST00000589941 TCRBP04435 133 aa6.5□□□□□ -1.37
SMAD4-209ENST00000589941 COL8A2P25067 703 aa6.5□□□□□ -1.37
SMAD4-209ENST00000589941 TALDO1P37837 337 aa6.5□□□□□ -1.37
SMAD4-209ENST00000589941 MAP3K8P41279 467 aa6.5□□□□□ -1.37
SMAD4-209ENST00000589941 RGS8P57771 180 aaPredicted RBP6.5□□□□□ -1.37
SMAD4-209ENST00000589941 HSF2Q03933 536 aa6.5□□□□□ -1.37
SMAD4-209ENST00000589941 CAMK2DQ13557 499 aa6.5□□□□□ -1.37
SMAD4-209ENST00000589941 MFSD13AQ14CX5 517 aa6.5□□□□□ -1.37
SMAD4-209ENST00000589941 GABRA6Q16445 453 aa6.5□□□□□ -1.37
SMAD4-209ENST00000589941 TAF9Q16594 264 aa6.5□□□□□ -1.37
SMAD4-209ENST00000589941 GSG1Q2KHT4 349 aa6.5□□□□□ -1.37
SMAD4-209ENST00000589941 PLPPR5Q32ZL2 321 aa6.5□□□□□ -1.37
SMAD4-209ENST00000589941 ARHGAP11BQ3KRB8 267 aa6.5□□□□□ -1.37
SMAD4-209ENST00000589941 SMUG1Q53HV7 270 aa6.5□□□□□ -1.37
SMAD4-209ENST00000589941 DCAF12L2Q5VW00 463 aa6.5□□□□□ -1.37
SMAD4-209ENST00000589941 ZNF57Q68EA5 555 aaPredicted RBP6.5□□□□□ -1.37
SMAD4-209ENST00000589941 UNQ9370/PRO34162Q6UXP9 181 aa6.5□□□□□ -1.37
SMAD4-209ENST00000589941 TMPRSS11FQ6ZWK6 438 aa6.5□□□□□ -1.37
SMAD4-209ENST00000589941 OLIG3Q7RTU3 272 aa6.5□□□□□ -1.37
SMAD4-209ENST00000589941 MYPOPQ86VE0 399 aaPredicted RBP6.5□□□□□ -1.37
SMAD4-209ENST00000589941 VRK2Q86Y07 508 aa6.5□□□□□ -1.37
SMAD4-209ENST00000589941 KLBQ86Z14 1044 aa6.5□□□□□ -1.37
SMAD4-209ENST00000589941 CPOQ8IVL8 374 aa6.5□□□□□ -1.37
SMAD4-209ENST00000589941 NRMQ8IXM6 262 aa6.5□□□□□ -1.37
SMAD4-209ENST00000589941 SAMD14Q8IZD0 417 aaPredicted RBP6.5□□□□□ -1.37
SMAD4-209ENST00000589941 OR2L13Q8N349 312 aa6.5□□□□□ -1.37
SMAD4-209ENST00000589941 MS4A15Q8N5U1 240 aa6.5□□□□□ -1.37
SMAD4-209ENST00000589941 TMEM99Q8N816 258 aa6.5□□□□□ -1.37
SMAD4-209ENST00000589941 PNLDC1Q8NA58 520 aaKnown RBP6.5□□□□□ -1.37
SMAD4-209ENST00000589941 UXS1Q8NBZ7 420 aa6.5□□□□□ -1.37
SMAD4-209ENST00000589941 C7orf57Q8NEG2 295 aa6.5□□□□□ -1.37
SMAD4-209ENST00000589941 OR11H4Q8NGC9 324 aa6.5□□□□□ -1.37
SMAD4-209ENST00000589941 ZNF431Q8TF32 576 aaPredicted RBP6.5□□□□□ -1.37
SMAD4-209ENST00000589941 OTUB1Q96FW1 271 aaPredicted RBP6.5□□□□□ -1.37
SMAD4-209ENST00000589941 BBS4Q96RK4 519 aa6.5□□□□□ -1.37
SMAD4-209ENST00000589941 ABHD1Q96SE0 405 aa6.5□□□□□ -1.37
SMAD4-209ENST00000589941 MCHR1Q99705 422 aa6.5□□□□□ -1.37
SMAD4-209ENST00000589941 MED28Q9H204 178 aa6.5□□□□□ -1.37
SMAD4-209ENST00000589941 ABCG5Q9H222 651 aa6.5□□□□□ -1.37
SMAD4-209ENST00000589941 PPIL3Q9H2H8 161 aaKnown RBP6.5□□□□□ -1.37
SMAD4-209ENST00000589941 PTGES2Q9H7Z7 377 aa6.5□□□□□ -1.37
SMAD4-209ENST00000589941 MTHFD2LQ9H903 347 aaPredicted RBP6.5□□□□□ -1.37
SMAD4-209ENST00000589941 ISG20L2Q9H9L3 353 aaKnown RBP6.5□□□□□ -1.37
SMAD4-209ENST00000589941 NANSQ9NR45 359 aa6.5□□□□□ -1.37
SMAD4-209ENST00000589941 MALT1Q9UDY8 824 aa6.5□□□□□ -1.37
SMAD4-209ENST00000589941 SCP2D1Q9UJQ7 156 aa6.5□□□□□ -1.37
SMAD4-209ENST00000589941 ZNF443Q9Y2A4 671 aaPredicted RBP6.5□□□□□ -1.37
SMAD4-209ENST00000589941 TMEM5Q9Y2B1 443 aa6.5□□□□□ -1.37
SMAD4-209ENST00000589941 KIAA1109Q2LD37 5005 aa6.5□□□□□ -1.37
SMAD4-209ENST00000589941 IGLV3-32A0A0A0MS00 114 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 IGHV1-18A0A0C4DH31 117 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 TEX13CA0A0J9YWL9 993 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 CIB4A0PJX0 185 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 SMIM30A4D0T7 59 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 TRAPPC13A5PLN9 417 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 CPSF4LA6NMK7 179 aaKnown RBP6.49□□□□□ -1.37
SMAD4-209ENST00000589941 CLDN34H7C241 214 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 ZNF593O00488 134 aaPredicted RBP6.49□□□□□ -1.37
SMAD4-209ENST00000589941 CDC42EP2O14613 210 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 GPR171O14626 319 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 PIP5K1CO60331 668 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 PTP4A3O75365 173 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 GATBO75879 557 aaKnown RBP6.49□□□□□ -1.37
SMAD4-209ENST00000589941 SLC2A10O95528 541 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 UCHL1P09936 223 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 CALCRP30988 508 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 GPR4P46093 362 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 INPP1P49441 399 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 PNLIPRP2P54317 469 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 CARD18P57730 90 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 ACTC1P68032 377 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 ACTA1P68133 377 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 PITPNAQ00169 270 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 ZNF85Q03923 595 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 FOXF1Q12946 379 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 INSL4Q14641 139 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 MAPK14Q16539 360 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 CDONQ4KMG0 1287 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 AVPI1Q5T686 147 aa6.49□□□□□ -1.37
SMAD4-209ENST00000589941 IDNKQ5T6J7 187 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms