RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 TESK1Q15569 626 aa13.67□□□□□ -0.22
SS18-226ENST00000585241 PCGF3Q3KNV8 242 aa13.67□□□□□ -0.22
SS18-226ENST00000585241 C2orf76Q3KRA6 126 aa13.67□□□□□ -0.22
SS18-226ENST00000585241 HAGHLQ6PII5 290 aaPredicted RBP13.67□□□□□ -0.22
SS18-226ENST00000585241 MKXQ8IYA7 352 aa13.67□□□□□ -0.22
SS18-226ENST00000585241 SCCPDHQ8NBX0 429 aa13.67□□□□□ -0.22
SS18-226ENST00000585241 OR6Q1Q8NGQ2 317 aa13.67□□□□□ -0.22
SS18-226ENST00000585241 ERGIC1Q969X5 290 aa13.67□□□□□ -0.22
SS18-226ENST00000585241 WDFY2Q96P53 400 aa13.67□□□□□ -0.22
SS18-226ENST00000585241 OR2V2Q96R30 315 aa13.67□□□□□ -0.22
SS18-226ENST00000585241 PLEKHF2Q9H8W4 249 aa13.67□□□□□ -0.22
SS18-226ENST00000585241 DYNLRB1Q9NP97 96 aa13.67□□□□□ -0.22
SS18-226ENST00000585241 PEX16Q9Y5Y5 336 aa13.67□□□□□ -0.22
SS18-226ENST00000585241 TENM4Q6N022 2769 aa13.66□□□□□ -0.22
SS18-226ENST00000585241 DOPEY2Q9Y3R5 2298 aa13.66□□□□□ -0.22
SS18-226ENST00000585241 TMEM272A0A1B0GTI8 110 aa13.66□□□□□ -0.22
SS18-226ENST00000585241 CTDSP2O14595 271 aa13.66□□□□□ -0.22
SS18-226ENST00000585241 SPRY1O43609 319 aaPredicted RBP13.66□□□□□ -0.22
SS18-226ENST00000585241 NOS1APO75052 506 aaPredicted RBP13.66□□□□□ -0.22
SS18-226ENST00000585241 ZNF780AO75290 641 aaPredicted RBP13.66□□□□□ -0.22
SS18-226ENST00000585241 KDM4BO94953 1096 aa13.66□□□□□ -0.22
SS18-226ENST00000585241 TMEM225BP0DP42 221 aa13.66□□□□□ -0.22
SS18-226ENST00000585241 VSIG8P0DPA2 414 aa13.66□□□□□ -0.22
SS18-226ENST00000585241 RAB6AP20340 208 aa13.66□□□□□ -0.22
SS18-226ENST00000585241 TNFAIP6P98066 277 aaPredicted RBP13.66□□□□□ -0.22
SS18-226ENST00000585241 UNC119Q13432 240 aa13.66□□□□□ -0.22
SS18-226ENST00000585241 PRAMEF6Q5VXH4 476 aa13.66□□□□□ -0.22
SS18-226ENST00000585241 C20orf204Q6ZNR8 217 aa13.66□□□□□ -0.22
SS18-226ENST00000585241 SLC25A26Q70HW3 274 aa13.66□□□□□ -0.22
SS18-226ENST00000585241 CDH24Q86UP0 819 aa13.66□□□□□ -0.22
SS18-226ENST00000585241 ZNF295-AS1Q8N0V1 137 aa13.66□□□□□ -0.22
SS18-226ENST00000585241 Q8TCH9 128 aa13.66□□□□□ -0.22
SS18-226ENST00000585241 ITLN1Q8WWA0 313 aa13.66□□□□□ -0.22
SS18-226ENST00000585241 IGFBPL1Q8WX77 278 aa13.66□□□□□ -0.22
SS18-226ENST00000585241 SLC25A38Q96DW6 304 aa13.66□□□□□ -0.22
SS18-226ENST00000585241 C6orf62Q9GZU0 229 aaPredicted RBP13.66□□□□□ -0.22
SS18-226ENST00000585241 METTL9Q9H1A3 318 aa13.66□□□□□ -0.22
SS18-226ENST00000585241 MIXL1Q9H2W2 232 aa13.66□□□□□ -0.22
SS18-226ENST00000585241 CLEC4MQ9H2X3 399 aaPredicted RBP13.66□□□□□ -0.22
SS18-226ENST00000585241 RHOFQ9HBH0 211 aa13.66□□□□□ -0.22
SS18-226ENST00000585241 COMMD3Q9UBI1 195 aa13.66□□□□□ -0.22
SS18-226ENST00000585241 POLDIP2Q9Y2S7 368 aa13.66□□□□□ -0.22
SS18-226ENST00000585241 HRNRQ86YZ3 2850 aaPredicted RBP13.66□□□□□ -0.22
SS18-226ENST00000585241 SYNGR1O43759 233 aa13.65□□□□□ -0.22
SS18-226ENST00000585241 ANGPTL7O43827 346 aa13.65□□□□□ -0.22
SS18-226ENST00000585241 APOA1P02647 267 aa13.65□□□□□ -0.22
SS18-226ENST00000585241 GRPP07492 148 aa13.65□□□□□ -0.22
SS18-226ENST00000585241 ERVK11-1P61568 191 aa13.65□□□□□ -0.22
SS18-226ENST00000585241 GPR176Q14439 515 aa13.65□□□□□ -0.22
SS18-226ENST00000585241 MPPED2Q15777 294 aa13.65□□□□□ -0.22
SS18-226ENST00000585241 SPRNQ5BIV9 151 aa13.65□□□□□ -0.22
SS18-226ENST00000585241 ELP2Q6IA86 826 aa13.65□□□□□ -0.22
SS18-226ENST00000585241 OR10Z1Q8NGY1 313 aa13.65□□□□□ -0.22
SS18-226ENST00000585241 OR51F2Q8NH61 342 aa13.65□□□□□ -0.22
SS18-226ENST00000585241 KCNG3Q8TAE7 436 aa13.65□□□□□ -0.22
SS18-226ENST00000585241 CST11Q9H112 138 aa13.65□□□□□ -0.22
SS18-226ENST00000585241 ABCG5Q9H222 651 aa13.65□□□□□ -0.22
SS18-226ENST00000585241 KCNK15Q9H427 330 aa13.65□□□□□ -0.22
SS18-226ENST00000585241 UBTD1Q9HAC8 227 aa13.65□□□□□ -0.22
SS18-226ENST00000585241 MTCH1Q9NZJ7 389 aa13.65□□□□□ -0.22
SS18-226ENST00000585241 ING4Q9UNL4 249 aa13.65□□□□□ -0.22
SS18-226ENST00000585241 CACNA1DQ01668 2161 aa13.65□□□□□ -0.22
SS18-226ENST00000585241 H7C417 338 aa13.64□□□□□ -0.23
SS18-226ENST00000585241 CDIPTO14735 213 aa13.64□□□□□ -0.23
SS18-226ENST00000585241 RHBDL1O75783 438 aa13.64□□□□□ -0.23
SS18-226ENST00000585241 CYB5AP00167 134 aa13.64□□□□□ -0.23
SS18-226ENST00000585241 PLATP00750 562 aa13.64□□□□□ -0.23
SS18-226ENST00000585241 PGA5P0DJD9 388 aa13.64□□□□□ -0.23
SS18-226ENST00000585241 TNFRSF1AP19438 455 aa13.64□□□□□ -0.23
SS18-226ENST00000585241 PLA2G7Q13093 441 aa13.64□□□□□ -0.23
SS18-226ENST00000585241 UBE2NLQ5JXB2 153 aa13.64□□□□□ -0.23
SS18-226ENST00000585241 WDR82Q6UXN9 313 aa13.64□□□□□ -0.23
SS18-226ENST00000585241 LRRC28Q86X40 367 aaPredicted RBP13.64□□□□□ -0.23
SS18-226ENST00000585241 LAX1Q8IWV1 398 aa13.64□□□□□ -0.23
SS18-226ENST00000585241 SAMD12Q8N8I0 201 aa13.64□□□□□ -0.23
SS18-226ENST00000585241 POC1AQ8NBT0 407 aa13.64□□□□□ -0.23
SS18-226ENST00000585241 TMEM104Q8NE00 496 aa13.64□□□□□ -0.23
SS18-226ENST00000585241 MRPS24Q96EL2 167 aaKnown RBP13.64□□□□□ -0.23
SS18-226ENST00000585241 POM121Q96HA1 1249 aa13.64□□□□□ -0.23
SS18-226ENST00000585241 S100A13Q99584 98 aa13.64□□□□□ -0.23
SS18-226ENST00000585241 NRIP2Q9BQI9 281 aa13.64□□□□□ -0.23
SS18-226ENST00000585241 EGLN1Q9GZT9 426 aa13.64□□□□□ -0.23
SS18-226ENST00000585241 FN3KRPQ9HA64 309 aa13.64□□□□□ -0.23
SS18-226ENST00000585241 PCDHB16Q9NRJ7 776 aa13.64□□□□□ -0.23
SS18-226ENST00000585241 RHBDL2Q9NX52 303 aa13.64□□□□□ -0.23
SS18-226ENST00000585241 RAB22AQ9UL26 194 aa13.64□□□□□ -0.23
SS18-226ENST00000585241 CDC14BO60729 498 aa13.63□□□□□ -0.23
SS18-226ENST00000585241 HPGDSO60760 199 aa13.63□□□□□ -0.23
SS18-226ENST00000585241 SFTPBP07988 381 aa13.63□□□□□ -0.23
SS18-226ENST00000585241 BMP4P12644 408 aa13.63□□□□□ -0.23
SS18-226ENST00000585241 PMELP40967 661 aa13.63□□□□□ -0.23
SS18-226ENST00000585241 ETV6P41212 452 aa13.63□□□□□ -0.23
SS18-226ENST00000585241 EFNB2P52799 333 aa13.63□□□□□ -0.23
SS18-226ENST00000585241 LSAMPQ13449 338 aa13.63□□□□□ -0.23
SS18-226ENST00000585241 RSU1Q15404 277 aa13.63□□□□□ -0.23
SS18-226ENST00000585241 ZNF181Q2M3W8 571 aa13.63□□□□□ -0.23
SS18-226ENST00000585241 SLC22A6Q4U2R8 563 aa13.63□□□□□ -0.23
SS18-226ENST00000585241 NHLRC3Q5JS37 347 aa13.63□□□□□ -0.23
SS18-226ENST00000585241 OR10K2Q6IF99 312 aa13.63□□□□□ -0.23
SS18-226ENST00000585241 Q8IYB0 196 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms