RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 SGPP2Q8IWX5 399 aa12.41□□□□□ -0.42
CDK5RAP3-237ENST00000585163 TMEM123Q8N131 208 aa12.41□□□□□ -0.42
CDK5RAP3-237ENST00000585163 ZNF799Q96GE5 643 aa12.41□□□□□ -0.42
CDK5RAP3-237ENST00000585163 TUBD1Q9UJT1 453 aa12.41□□□□□ -0.42
CDK5RAP3-237ENST00000585163 DHHO43323 396 aa12.4□□□□□ -0.42
CDK5RAP3-237ENST00000585163 EIF1BO60739 113 aaKnown RBP12.4□□□□□ -0.42
CDK5RAP3-237ENST00000585163 MED6O75586 246 aa12.4□□□□□ -0.42
CDK5RAP3-237ENST00000585163 VAMP5O95183 116 aa12.4□□□□□ -0.42
CDK5RAP3-237ENST00000585163 HEXAP06865 529 aa12.4□□□□□ -0.42
CDK5RAP3-237ENST00000585163 DBHP09172 617 aa12.4□□□□□ -0.42
CDK5RAP3-237ENST00000585163 FNDC9Q8TBE3 224 aa12.4□□□□□ -0.42
CDK5RAP3-237ENST00000585163 RBM24Q9BX46 236 aaKnown RBP12.4□□□□□ -0.42
CDK5RAP3-237ENST00000585163 ZFP57Q9NU63 452 aa12.4□□□□□ -0.42
CDK5RAP3-237ENST00000585163 LY6G6EA0A0G2JKS1 128 aa12.4□□□□□ -0.42
CDK5RAP3-237ENST00000585163 CRYM-AS1A6NIL9 109 aa12.4□□□□□ -0.42
CDK5RAP3-237ENST00000585163 PRSS47A8MTI9 375 aa12.4□□□□□ -0.42
CDK5RAP3-237ENST00000585163 RNASEK-C17orf49H0YIS7 233 aa12.4□□□□□ -0.42
CDK5RAP3-237ENST00000585163 K7EPK0 472 aa12.4□□□□□ -0.42
CDK5RAP3-237ENST00000585163 DEDDO75618 318 aa12.4□□□□□ -0.42
CDK5RAP3-237ENST00000585163 GAPDHP04406 335 aaKnown RBP12.4□□□□□ -0.42
CDK5RAP3-237ENST00000585163 CYC1P08574 325 aa12.4□□□□□ -0.42
CDK5RAP3-237ENST00000585163 FCGR3AP08637 254 aa12.4□□□□□ -0.42
CDK5RAP3-237ENST00000585163 IGFBP4P22692 258 aa12.4□□□□□ -0.42
CDK5RAP3-237ENST00000585163 RFC3P40938 356 aa12.4□□□□□ -0.42
CDK5RAP3-237ENST00000585163 SSTP61278 116 aa12.4□□□□□ -0.42
CDK5RAP3-237ENST00000585163 BTNL8Q6UX41 500 aa12.4□□□□□ -0.42
CDK5RAP3-237ENST00000585163 SPEM1Q8N4L4 309 aa12.4□□□□□ -0.42
CDK5RAP3-237ENST00000585163 FAM71E2Q8N5Q1 922 aa12.4□□□□□ -0.42
CDK5RAP3-237ENST00000585163 CCDC74BQ96LY2 380 aa12.4□□□□□ -0.42
CDK5RAP3-237ENST00000585163 HDHD3Q9BSH5 251 aaPredicted RBP12.4□□□□□ -0.42
CDK5RAP3-237ENST00000585163 PLEK2Q9NYT0 353 aa12.4□□□□□ -0.42
CDK5RAP3-237ENST00000585163 ANXA10Q9UJ72 324 aa12.4□□□□□ -0.42
CDK5RAP3-237ENST00000585163 EDARQ9UNE0 448 aa12.4□□□□□ -0.42
CDK5RAP3-237ENST00000585163 U3KQA8 63 aa12.4□□□□□ -0.42
CDK5RAP3-237ENST00000585163 IGHV3-15A0A0B4J1V0 119 aa12.39□□□□□ -0.43
CDK5RAP3-237ENST00000585163 NPIPA2E9PIF3 369 aa12.39□□□□□ -0.43
CDK5RAP3-237ENST00000585163 NPIPA3F8WFD2 350 aa12.39□□□□□ -0.43
CDK5RAP3-237ENST00000585163 MSTNO14793 375 aa12.39□□□□□ -0.43
CDK5RAP3-237ENST00000585163 JTBO76095 146 aa12.39□□□□□ -0.43
CDK5RAP3-237ENST00000585163 CD5P06127 495 aa12.39□□□□□ -0.43
CDK5RAP3-237ENST00000585163 NME2P22392 152 aa12.39□□□□□ -0.43
CDK5RAP3-237ENST00000585163 PCOLCEQ15113 449 aa12.39□□□□□ -0.43
CDK5RAP3-237ENST00000585163 SNAI3Q3KNW1 292 aa12.39□□□□□ -0.43
CDK5RAP3-237ENST00000585163 FAM209BQ5JX69 171 aa12.39□□□□□ -0.43
CDK5RAP3-237ENST00000585163 OR9K2Q8NGE7 335 aa12.39□□□□□ -0.43
CDK5RAP3-237ENST00000585163 SPTSSAQ969W0 71 aa12.39□□□□□ -0.43
CDK5RAP3-237ENST00000585163 UCN2Q96RP3 112 aa12.39□□□□□ -0.43
CDK5RAP3-237ENST00000585163 DUSP23Q9BVJ7 150 aa12.39□□□□□ -0.43
CDK5RAP3-237ENST00000585163 PARP11Q9NR21 331 aa12.39□□□□□ -0.43
CDK5RAP3-237ENST00000585163 FOXD3Q9UJU5 478 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP3-237ENST00000585163 PADI1Q9ULC6 663 aa12.39□□□□□ -0.43
CDK5RAP3-237ENST00000585163 WDR87Q6ZQQ6 2873 aa12.39□□□□□ -0.43
CDK5RAP3-237ENST00000585163 FARS2O95363 451 aaKnown RBP12.39□□□□□ -0.43
CDK5RAP3-237ENST00000585163 HOXA1P49639 335 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP3-237ENST00000585163 RAB13P51153 203 aa12.39□□□□□ -0.43
CDK5RAP3-237ENST00000585163 MTCP1P56278 107 aa12.39□□□□□ -0.43
CDK5RAP3-237ENST00000585163 RSPO4Q2I0M5 234 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP3-237ENST00000585163 ZNF528Q3MIS6 628 aa12.39□□□□□ -0.43
CDK5RAP3-237ENST00000585163 FBXO17Q96EF6 278 aa12.39□□□□□ -0.43
CDK5RAP3-237ENST00000585163 CPNE2Q96FN4 548 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP3-237ENST00000585163 GNRHR2Q96P88 292 aa12.39□□□□□ -0.43
CDK5RAP3-237ENST00000585163 PRRX2Q99811 253 aa12.39□□□□□ -0.43
CDK5RAP3-237ENST00000585163 PLA2G2EQ9NZK7 142 aa12.39□□□□□ -0.43
CDK5RAP3-237ENST00000585163 FBXL17Q9UF56 701 aa12.39□□□□□ -0.43
CDK5RAP3-237ENST00000585163 LOC102723996A0A087X1L8 192 aa12.38□□□□□ -0.43
CDK5RAP3-237ENST00000585163 IFNA21P01568 189 aa12.38□□□□□ -0.43
CDK5RAP3-237ENST00000585163 CELA2AP08217 269 aa12.38□□□□□ -0.43
CDK5RAP3-237ENST00000585163 SFTA3P0C7M3 94 aa12.38□□□□□ -0.43
CDK5RAP3-237ENST00000585163 OR5H8P0DN80 308 aa12.38□□□□□ -0.43
CDK5RAP3-237ENST00000585163 TMEM225BP0DP42 221 aa12.38□□□□□ -0.43
CDK5RAP3-237ENST00000585163 FCGR2CP31995 323 aa12.38□□□□□ -0.43
CDK5RAP3-237ENST00000585163 SUCLG1P53597 346 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP3-237ENST00000585163 STARD6P59095 220 aa12.38□□□□□ -0.43
CDK5RAP3-237ENST00000585163 SMCO1Q147U7 214 aa12.38□□□□□ -0.43
CDK5RAP3-237ENST00000585163 ZNF124Q15973 351 aa12.38□□□□□ -0.43
CDK5RAP3-237ENST00000585163 GGNBP1Q5YKI7 109 aa12.38□□□□□ -0.43
CDK5RAP3-237ENST00000585163 PLXDC2Q6UX71 529 aa12.38□□□□□ -0.43
CDK5RAP3-237ENST00000585163 SPSB1Q96BD6 273 aa12.38□□□□□ -0.43
CDK5RAP3-237ENST00000585163 LIME1Q9H400 295 aa12.38□□□□□ -0.43
CDK5RAP3-237ENST00000585163 GPR173Q9NS66 373 aa12.38□□□□□ -0.43
CDK5RAP3-237ENST00000585163 HSF4Q9ULV5 492 aa12.38□□□□□ -0.43
CDK5RAP3-237ENST00000585163 AMDHD2Q9Y303 409 aa12.38□□□□□ -0.43
CDK5RAP3-237ENST00000585163 CACNA1EQ15878 2313 aa12.38□□□□□ -0.43
CDK5RAP3-237ENST00000585163 ZIC3O60481 467 aa12.38□□□□□ -0.43
CDK5RAP3-237ENST00000585163 FBXO24O75426 580 aa12.38□□□□□ -0.43
CDK5RAP3-237ENST00000585163 ACKR3P25106 362 aa12.38□□□□□ -0.43
CDK5RAP3-237ENST00000585163 NFYBP25208 207 aa12.38□□□□□ -0.43
CDK5RAP3-237ENST00000585163 EPHA8P29322 1005 aaPredicted RBP12.38□□□□□ -0.43
CDK5RAP3-237ENST00000585163 F2RL1P55085 397 aa12.38□□□□□ -0.43
CDK5RAP3-237ENST00000585163 TMEM33P57088 247 aa12.38□□□□□ -0.43
CDK5RAP3-237ENST00000585163 FAM27BQ5VT28 67 aa12.38□□□□□ -0.43
CDK5RAP3-237ENST00000585163 RAET1LQ5VY80 246 aa12.38□□□□□ -0.43
CDK5RAP3-237ENST00000585163 OPN5Q6U736 354 aa12.38□□□□□ -0.43
CDK5RAP3-237ENST00000585163 MAML2Q8IZL2 1156 aaPredicted RBP12.38□□□□□ -0.43
CDK5RAP3-237ENST00000585163 ZNF565Q8N9K5 539 aa12.38□□□□□ -0.43
CDK5RAP3-237ENST00000585163 ZIC4Q8N9L1 334 aa12.38□□□□□ -0.43
CDK5RAP3-237ENST00000585163 MRPL24Q96A35 216 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP3-237ENST00000585163 NAA11Q9BSU3 229 aaPredicted RBP12.38□□□□□ -0.43
CDK5RAP3-237ENST00000585163 ANGPTL4Q9BY76 406 aa12.38□□□□□ -0.43
CDK5RAP3-237ENST00000585163 METTL9Q9H1A3 318 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms