RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 ZNF799Q96GE5 643 aa14.6□□□□□ -0.07
TOP3A-220ENST00000585031 Q96MT0 163 aa14.6□□□□□ -0.07
TOP3A-220ENST00000585031 GAFA1Q96PS6 74 aa14.6□□□□□ -0.07
TOP3A-220ENST00000585031 CDCA4Q9BXL8 241 aa14.6□□□□□ -0.07
TOP3A-220ENST00000585031 SLC25A19Q9HC21 320 aa14.6□□□□□ -0.07
TOP3A-220ENST00000585031 RAB18Q9NP72 206 aa14.6□□□□□ -0.07
TOP3A-220ENST00000585031 MRPL22Q9NWU5 206 aaKnown RBP14.6□□□□□ -0.07
TOP3A-220ENST00000585031 CLN6Q9NWW5 311 aa14.6□□□□□ -0.07
TOP3A-220ENST00000585031 GAR1Q9NY12 217 aaKnown RBP14.6□□□□□ -0.07
TOP3A-220ENST00000585031 SF3B6Q9Y3B4 125 aaKnown RBP14.6□□□□□ -0.07
TOP3A-220ENST00000585031 ANGPTL7O43827 346 aa14.59□□□□□ -0.07
TOP3A-220ENST00000585031 NDUFB2O95178 105 aa14.59□□□□□ -0.07
TOP3A-220ENST00000585031 SOX14O95416 240 aa14.59□□□□□ -0.07
TOP3A-220ENST00000585031 FMO3P31513 532 aa14.59□□□□□ -0.07
TOP3A-220ENST00000585031 ALDH3B2P48448 385 aa14.59□□□□□ -0.07
TOP3A-220ENST00000585031 TPTEP56180 551 aa14.59□□□□□ -0.07
TOP3A-220ENST00000585031 ERVFRD-1P60508 538 aa14.59□□□□□ -0.07
TOP3A-220ENST00000585031 CD83Q01151 205 aa14.59□□□□□ -0.07
TOP3A-220ENST00000585031 LRRC10Q5BKY1 277 aa14.59□□□□□ -0.07
TOP3A-220ENST00000585031 TCTEX1D4Q5JR98 221 aa14.59□□□□□ -0.07
TOP3A-220ENST00000585031 C12orf73Q69YU5 71 aa14.59□□□□□ -0.07
TOP3A-220ENST00000585031 RPL13AP3Q6NVV1 102 aa14.59□□□□□ -0.07
TOP3A-220ENST00000585031 ZNF788Q6ZQV5 615 aa14.59□□□□□ -0.07
TOP3A-220ENST00000585031 ADCK1Q86TW2 530 aa14.59□□□□□ -0.07
TOP3A-220ENST00000585031 OR9Q1Q8NGQ5 310 aa14.59□□□□□ -0.07
TOP3A-220ENST00000585031 PLCXD1Q9NUJ7 323 aa14.59□□□□□ -0.07
TOP3A-220ENST00000585031 ZNF391Q9UJN7 358 aa14.59□□□□□ -0.07
TOP3A-220ENST00000585031 U3KQK5 164 aa14.59□□□□□ -0.07
TOP3A-220ENST00000585031 UNC119BA6NIH7 251 aa14.58□□□□□ -0.08
TOP3A-220ENST00000585031 NHLRC4P0CG21 123 aaPredicted RBP14.58□□□□□ -0.08
TOP3A-220ENST00000585031 OTX1P32242 354 aaPredicted RBP14.58□□□□□ -0.08
TOP3A-220ENST00000585031 LAIR2Q6ISS4 152 aa14.58□□□□□ -0.08
TOP3A-220ENST00000585031 DPY19L4Q7Z388 723 aa14.58□□□□□ -0.08
TOP3A-220ENST00000585031 TMEM219Q86XT9 240 aa14.58□□□□□ -0.08
TOP3A-220ENST00000585031 MKXQ8IYA7 352 aa14.58□□□□□ -0.08
TOP3A-220ENST00000585031 SVOPQ8N4V2 548 aa14.58□□□□□ -0.08
TOP3A-220ENST00000585031 NMNAT3Q96T66 252 aa14.58□□□□□ -0.08
TOP3A-220ENST00000585031 INPP5EQ9NRR6 644 aa14.58□□□□□ -0.08
TOP3A-220ENST00000585031 TBC1D23Q9NUY8 699 aa14.58□□□□□ -0.08
TOP3A-220ENST00000585031 C14orf119Q9NWQ9 140 aa14.58□□□□□ -0.08
TOP3A-220ENST00000585031 HAO2Q9NYQ3 351 aa14.58□□□□□ -0.08
TOP3A-220ENST00000585031 CDH10Q9Y6N8 788 aa14.58□□□□□ -0.08
TOP3A-220ENST00000585031 CSMD3Q7Z407 3707 aa14.57□□□□□ -0.08
TOP3A-220ENST00000585031 CDIPTO14735 213 aa14.57□□□□□ -0.08
TOP3A-220ENST00000585031 SLC2A1P11166 492 aa14.57□□□□□ -0.08
TOP3A-220ENST00000585031 FAHP16930 419 aa14.57□□□□□ -0.08
TOP3A-220ENST00000585031 CRABP1P29762 137 aa14.57□□□□□ -0.08
TOP3A-220ENST00000585031 SNRPGP62308 76 aaKnown RBP14.57□□□□□ -0.08
TOP3A-220ENST00000585031 BLCAPP62952 87 aa14.57□□□□□ -0.08
TOP3A-220ENST00000585031 GINS1Q14691 196 aa14.57□□□□□ -0.08
TOP3A-220ENST00000585031 PLA1AQ53H76 456 aa14.57□□□□□ -0.08
TOP3A-220ENST00000585031 TMEM236Q5W0B7 351 aa14.57□□□□□ -0.08
TOP3A-220ENST00000585031 KCTD8Q6ZWB6 473 aa14.57□□□□□ -0.08
TOP3A-220ENST00000585031 GPR141Q7Z602 305 aa14.57□□□□□ -0.08
TOP3A-220ENST00000585031 LHFPL4Q7Z7J7 247 aa14.57□□□□□ -0.08
TOP3A-220ENST00000585031 SATL1Q86VE3 508 aa14.57□□□□□ -0.08
TOP3A-220ENST00000585031 C11orf42Q8N5U0 333 aa14.57□□□□□ -0.08
TOP3A-220ENST00000585031 OR52L1Q8NGH7 329 aa14.57□□□□□ -0.08
TOP3A-220ENST00000585031 OR8J1Q8NGP2 316 aa14.57□□□□□ -0.08
TOP3A-220ENST00000585031 ANGPTL6Q8NI99 470 aa14.57□□□□□ -0.08
TOP3A-220ENST00000585031 MYDGFQ969H8 173 aa14.57□□□□□ -0.08
TOP3A-220ENST00000585031 C12orf43Q96C57 262 aaKnown RBP14.57□□□□□ -0.08
TOP3A-220ENST00000585031 RCC1LQ96I51 464 aaKnown RBP14.57□□□□□ -0.08
TOP3A-220ENST00000585031 FN3KQ9H479 309 aa14.57□□□□□ -0.08
TOP3A-220ENST00000585031 SLC25A10Q9UBX3 287 aaPredicted RBP14.57□□□□□ -0.08
TOP3A-220ENST00000585031 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.56□□□□□ -0.08
TOP3A-220ENST00000585031 A0A1W2PQ09 198 aa14.56□□□□□ -0.08
TOP3A-220ENST00000585031 EFCAB10A6NFE3 127 aa14.56□□□□□ -0.08
TOP3A-220ENST00000585031 PTGES3LE9PB15 166 aa14.56□□□□□ -0.08
TOP3A-220ENST00000585031 RGS10O43665 173 aa14.56□□□□□ -0.08
TOP3A-220ENST00000585031 WBP4O75554 376 aaKnown RBP14.56□□□□□ -0.08
TOP3A-220ENST00000585031 JUNBP17275 347 aaPredicted RBP14.56□□□□□ -0.08
TOP3A-220ENST00000585031 GABRB1P18505 474 aa14.56□□□□□ -0.08
TOP3A-220ENST00000585031 CDK5Q00535 292 aa14.56□□□□□ -0.08
TOP3A-220ENST00000585031 LDLRAD2Q5SZI1 272 aa14.56□□□□□ -0.08
TOP3A-220ENST00000585031 DPY19L2P2Q6ZN68 376 aa14.56□□□□□ -0.08
TOP3A-220ENST00000585031 LIAT1Q6ZQX7 453 aa14.56□□□□□ -0.08
TOP3A-220ENST00000585031 ZBTB46Q86UZ6 589 aa14.56□□□□□ -0.08
TOP3A-220ENST00000585031 OR2AJ1Q8NGZ0 328 aa14.56□□□□□ -0.08
TOP3A-220ENST00000585031 APH1BQ8WW43 257 aa14.56□□□□□ -0.08
TOP3A-220ENST00000585031 ZNRF4Q8WWF5 429 aa14.56□□□□□ -0.08
TOP3A-220ENST00000585031 CCDC90BQ9GZT6 254 aa14.56□□□□□ -0.08
TOP3A-220ENST00000585031 TLNRD1Q9H1K6 362 aa14.56□□□□□ -0.08
TOP3A-220ENST00000585031 DUSP21Q9H596 190 aa14.56□□□□□ -0.08
TOP3A-220ENST00000585031 A6NDX4 124 aa14.55□□□□□ -0.08
TOP3A-220ENST00000585031 SNTNA6NMZ2 147 aa14.55□□□□□ -0.08
TOP3A-220ENST00000585031 DUS4LO95620 317 aaKnown RBP14.55□□□□□ -0.08
TOP3A-220ENST00000585031 HMGN1P05114 100 aa14.55□□□□□ -0.08
TOP3A-220ENST00000585031 NDUFB7P17568 137 aa14.55□□□□□ -0.08
TOP3A-220ENST00000585031 SLC35A2P78381 396 aa14.55□□□□□ -0.08
TOP3A-220ENST00000585031 DOC2BQ14184 412 aa14.55□□□□□ -0.08
TOP3A-220ENST00000585031 MEDAGQ5VYS4 303 aa14.55□□□□□ -0.08
TOP3A-220ENST00000585031 LYPD4Q6UWN0 246 aa14.55□□□□□ -0.08
TOP3A-220ENST00000585031 SPARTQ8N0X7 666 aa14.55□□□□□ -0.08
TOP3A-220ENST00000585031 OR8S1Q8NH09 359 aa14.55□□□□□ -0.08
TOP3A-220ENST00000585031 TSSK6Q9BXA6 273 aa14.55□□□□□ -0.08
TOP3A-220ENST00000585031 FGF23Q9GZV9 251 aaPredicted RBP14.55□□□□□ -0.08
TOP3A-220ENST00000585031 RPRD1BQ9NQG5 326 aaKnown RBP14.55□□□□□ -0.08
TOP3A-220ENST00000585031 IL20Q9NYY1 176 aa14.55□□□□□ -0.08
TOP3A-220ENST00000585031 N6AMT1Q9Y5N5 214 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms