RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 ZNF85Q03923 595 aa1.83□□□□□ -2.12
VAPA-208ENST00000584796 PPIDQ08752 370 aaKnown RBP1.83□□□□□ -2.12
VAPA-208ENST00000584796 SCRN3Q0VDG4 424 aa1.83□□□□□ -2.12
VAPA-208ENST00000584796 NSDHLQ15738 373 aa1.83□□□□□ -2.12
VAPA-208ENST00000584796 MRPL23Q16540 153 aaKnown RBP1.83□□□□□ -2.12
VAPA-208ENST00000584796 NDUFA9Q16795 377 aa1.83□□□□□ -2.12
VAPA-208ENST00000584796 ECSCRQ19T08 205 aa1.83□□□□□ -2.12
VAPA-208ENST00000584796 LGSNQ5TDP6 509 aa1.83□□□□□ -2.12
VAPA-208ENST00000584796 FAM219BQ5XKK7 198 aa1.83□□□□□ -2.12
VAPA-208ENST00000584796 WDR25Q64LD2 544 aaPredicted RBP1.83□□□□□ -2.12
VAPA-208ENST00000584796 PVRIGQ6DKI7 326 aa1.83□□□□□ -2.12
VAPA-208ENST00000584796 CLEC6AQ6EIG7 209 aa1.83□□□□□ -2.12
VAPA-208ENST00000584796 ADNP2Q6IQ32 1131 aa1.83□□□□□ -2.12
VAPA-208ENST00000584796 PRMT9Q6P2P2 845 aa1.83□□□□□ -2.12
VAPA-208ENST00000584796 DCUN1D2Q6PH85 259 aa1.83□□□□□ -2.12
VAPA-208ENST00000584796 SASS6Q6UVJ0 657 aa1.83□□□□□ -2.12
VAPA-208ENST00000584796 APOOLQ6UXV4 268 aa1.83□□□□□ -2.12
VAPA-208ENST00000584796 HSDL2Q6YN16 418 aa1.83□□□□□ -2.12
VAPA-208ENST00000584796 C19orf35Q6ZS72 473 aa1.83□□□□□ -2.12
VAPA-208ENST00000584796 SLC16A14Q7RTX9 510 aa1.83□□□□□ -2.12
VAPA-208ENST00000584796 ZNF571Q7Z3V5 609 aaPredicted RBP1.83□□□□□ -2.12
VAPA-208ENST00000584796 GLT6D1Q7Z4J2 308 aa1.83□□□□□ -2.12
VAPA-208ENST00000584796 LINC01561Q8N1V8 128 aa1.83□□□□□ -2.12
VAPA-208ENST00000584796 ZNF740Q8NDX6 193 aa1.83□□□□□ -2.12
VAPA-208ENST00000584796 B3GNT7Q8NFL0 401 aa1.83□□□□□ -2.12
VAPA-208ENST00000584796 OR4A4PQ8NGN8 299 aa1.83□□□□□ -2.12
VAPA-208ENST00000584796 ANGPTL6Q8NI99 470 aa1.83□□□□□ -2.12
VAPA-208ENST00000584796 HAUS1Q96CS2 278 aa1.83□□□□□ -2.12
VAPA-208ENST00000584796 FAF2Q96CS3 445 aa1.83□□□□□ -2.12
VAPA-208ENST00000584796 DNAJA3Q96EY1 480 aa1.83□□□□□ -2.12
VAPA-208ENST00000584796 ZNF799Q96GE5 643 aa1.83□□□□□ -2.12
VAPA-208ENST00000584796 OLFM3Q96PB7 478 aa1.83□□□□□ -2.12
VAPA-208ENST00000584796 TNFRSF13CQ96RJ3 184 aa1.83□□□□□ -2.12
VAPA-208ENST00000584796 SLC35A5Q9BS91 424 aa1.83□□□□□ -2.12
VAPA-208ENST00000584796 UGT2B28Q9BY64 529 aa1.83□□□□□ -2.12
VAPA-208ENST00000584796 DRC3Q9H069 523 aa1.83□□□□□ -2.12
VAPA-208ENST00000584796 RACGAP1Q9H0H5 632 aa1.83□□□□□ -2.12
VAPA-208ENST00000584796 PPA2Q9H2U2 334 aa1.83□□□□□ -2.12
VAPA-208ENST00000584796 IKZF5Q9H5V7 419 aa1.83□□□□□ -2.12
VAPA-208ENST00000584796 NANSQ9NR45 359 aa1.83□□□□□ -2.12
VAPA-208ENST00000584796 INPP5EQ9NRR6 644 aa1.83□□□□□ -2.12
VAPA-208ENST00000584796 ZNF275Q9NSD4 429 aaPredicted RBP1.83□□□□□ -2.12
VAPA-208ENST00000584796 C14orf105Q9NVL8 296 aa1.83□□□□□ -2.12
VAPA-208ENST00000584796 TAS2R16Q9NYV7 291 aa1.83□□□□□ -2.12
VAPA-208ENST00000584796 IL20Q9NYY1 176 aa1.83□□□□□ -2.12
VAPA-208ENST00000584796 PTTG3PQ9NZH4 202 aa1.83□□□□□ -2.12
VAPA-208ENST00000584796 STX18Q9P2W9 335 aaKnown RBP1.83□□□□□ -2.12
VAPA-208ENST00000584796 SLC2A6Q9UGQ3 507 aa1.83□□□□□ -2.12
VAPA-208ENST00000584796 TMCO1Q9UM00 188 aa1.83□□□□□ -2.12
VAPA-208ENST00000584796 HYOU1Q9Y4L1 999 aa1.83□□□□□ -2.12
VAPA-208ENST00000584796 HEBP2Q9Y5Z4 205 aa1.83□□□□□ -2.12
VAPA-208ENST00000584796 SOX21Q9Y651 276 aaPredicted RBP1.83□□□□□ -2.12
VAPA-208ENST00000584796 TANC2Q9HCD6 1990 aa1.83□□□□□ -2.12
VAPA-208ENST00000584796 PKHD1P08F94 4074 aa1.82□□□□□ -2.12
VAPA-208ENST00000584796 UBR4Q5T4S7 5183 aa1.82□□□□□ -2.12
VAPA-208ENST00000584796 TRAV6A0A075B6T7 132 aa1.82□□□□□ -2.12
VAPA-208ENST00000584796 TRAV9-2A0A087WT02 112 aa1.82□□□□□ -2.12
VAPA-208ENST00000584796 IQANK1A0A1B0GTG1 560 aa1.82□□□□□ -2.12
VAPA-208ENST00000584796 KRTAP4-16G5E9R7 235 aaPredicted RBP1.82□□□□□ -2.12
VAPA-208ENST00000584796 H3BMQ9 156 aa1.82□□□□□ -2.12
VAPA-208ENST00000584796 KLRC4-KLRK1H3BQV0 150 aa1.82□□□□□ -2.12
VAPA-208ENST00000584796 GFYI3L273 518 aa1.82□□□□□ -2.12
VAPA-208ENST00000584796 SIRPB1O00241 398 aa1.82□□□□□ -2.12
VAPA-208ENST00000584796 UBFD1O14562 309 aaKnown RBP1.82□□□□□ -2.12
VAPA-208ENST00000584796 AIM2O14862 343 aa1.82□□□□□ -2.12
VAPA-208ENST00000584796 EIF3HO15372 352 aaKnown RBP eCLIP1.82□□□□□ -2.12
VAPA-208ENST00000584796 CHST10O43529 356 aa1.82□□□□□ -2.12
VAPA-208ENST00000584796 TCF21O43680 179 aa1.82□□□□□ -2.12
VAPA-208ENST00000584796 TYROBPO43914 113 aa1.82□□□□□ -2.12
VAPA-208ENST00000584796 CHST1O43916 411 aa1.82□□□□□ -2.12
VAPA-208ENST00000584796 HCN1O60741 890 aa1.82□□□□□ -2.12
VAPA-208ENST00000584796 MYO1DO94832 1006 aa1.82□□□□□ -2.12
VAPA-208ENST00000584796 C1orf105O95561 183 aa1.82□□□□□ -2.12
VAPA-208ENST00000584796 ALDOBP05062 364 aa1.82□□□□□ -2.12
VAPA-208ENST00000584796 TPM3P06753 285 aa1.82□□□□□ -2.12
VAPA-208ENST00000584796 FCGR3AP08637 254 aa1.82□□□□□ -2.12
VAPA-208ENST00000584796 SNRPCP09234 159 aaKnown RBP1.82□□□□□ -2.12
VAPA-208ENST00000584796 UBCP0CG48 685 aaKnown RBP1.82□□□□□ -2.12
VAPA-208ENST00000584796 ERGP11308 486 aa1.82□□□□□ -2.12
VAPA-208ENST00000584796 CCL2P13500 99 aa1.82□□□□□ -2.12
VAPA-208ENST00000584796 ZNF3P17036 446 aa1.82□□□□□ -2.12
VAPA-208ENST00000584796 SDC1P18827 310 aa1.82□□□□□ -2.12
VAPA-208ENST00000584796 COX5AP20674 150 aa1.82□□□□□ -2.12
VAPA-208ENST00000584796 DCKP27707 260 aa1.82□□□□□ -2.12
VAPA-208ENST00000584796 FGF9P31371 208 aaPredicted RBP1.82□□□□□ -2.12
VAPA-208ENST00000584796 FOXN2P32314 431 aa1.82□□□□□ -2.12
VAPA-208ENST00000584796 SPRP35270 261 aaPredicted RBP1.82□□□□□ -2.12
VAPA-208ENST00000584796 UGT2B10P36537 528 aa1.82□□□□□ -2.12
VAPA-208ENST00000584796 NAA10P41227 235 aaPredicted RBP1.82□□□□□ -2.12
VAPA-208ENST00000584796 HTR2BP41595 481 aa1.82□□□□□ -2.12
VAPA-208ENST00000584796 MARCKSL1P49006 195 aa1.82□□□□□ -2.12
VAPA-208ENST00000584796 CX3CR1P49238 355 aa1.82□□□□□ -2.12
VAPA-208ENST00000584796 POU3F4P49335 361 aa1.82□□□□□ -2.12
VAPA-208ENST00000584796 KRTAP10-10P60014 251 aa1.82□□□□□ -2.12
VAPA-208ENST00000584796 RND3P61587 244 aa1.82□□□□□ -2.12
VAPA-208ENST00000584796 RPL8P62917 257 aaKnown RBP1.82□□□□□ -2.12
VAPA-208ENST00000584796 CDH17Q12864 832 aa1.82□□□□□ -2.12
VAPA-208ENST00000584796 SELENBP1Q13228 472 aa1.82□□□□□ -2.12
VAPA-208ENST00000584796 COTL1Q14019 142 aa1.82□□□□□ -2.12
VAPA-208ENST00000584796 RCAN2Q14206 197 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms